Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:106060942-106210953

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nfatc3 8 106059584 to 106130537 70953 + protein coding gene nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
Gm27956 8 106071615 to 106071874 259 - unclassified non-coding RNA gene predicted gene, 27956
Tssr79214 8 106078799 to 106078818 19 + TSS region transcription start site region 79214
Tssr79215 8 106081410 to 106081412 2 + TSS region transcription start site region 79215
Tssr82754 8 106107216 to 106107241 25 - TSS region transcription start site region 82754
Tssr79216 8 106107455 to 106107459 4 + TSS region transcription start site region 79216
Tssr79217 8 106111542 to 106111553 11 + TSS region transcription start site region 79217
Tssr79218 8 106117831 to 106117835 4 + TSS region transcription start site region 79218
Esrp2 8 106130634 to 106137006 6372 - protein coding gene epithelial splicing regulatory protein 2
Tssr82755 8 106134933 to 106134943 10 - TSS region transcription start site region 82755
Tssr82756 8 106134945 to 106134960 15 - TSS region transcription start site region 82756
1810019D21Rik 8 106135400 to 106138525 3125 + lncRNA gene RIKEN cDNA 1810019D21 gene
Tssr79219 8 106135401 to 106135431 30 + TSS region transcription start site region 79219
Tssr79220 8 106135435 to 106135457 22 + TSS region transcription start site region 79220
Tssr79221 8 106135464 to 106135480 16 + TSS region transcription start site region 79221
Tssr79222 8 106135497 to 106135512 15 + TSS region transcription start site region 79222
Tssr79223 8 106135541 to 106135570 29 + TSS region transcription start site region 79223
Cpgi20965 8 106135742 to 106137629 1887 CpG island CpG island 20965
Tssr79224 8 106135869 to 106135889 20 + TSS region transcription start site region 79224
Tssr79225 8 106135942 to 106135953 11 + TSS region transcription start site region 79225
Tssr82757 8 106136792 to 106136876 84 - TSS region transcription start site region 82757
Tssr82758 8 106136890 to 106136901 11 - TSS region transcription start site region 82758
Tssr79226 8 106137058 to 106137074 16 + TSS region transcription start site region 79226
Tssr82759 8 106137368 to 106137395 27 - TSS region transcription start site region 82759
Cpgi20966 8 106138010 to 106138407 397 CpG island CpG island 20966
Tssr79227 8 106138408 to 106138421 13 + TSS region transcription start site region 79227
Tssr79228 8 106150020 to 106150063 43 + TSS region transcription start site region 79228
Cpgi20967 8 106150078 to 106150729 651 CpG island CpG island 20967
Tssr79229 8 106150359 to 106150417 58 + TSS region transcription start site region 79229
Pla2g15 8 106150399 to 106164715 14316 + protein coding gene phospholipase A2, group XV
Tssr79230 8 106150423 to 106150438 15 + TSS region transcription start site region 79230
Tssr79231 8 106150470 to 106150481 11 + TSS region transcription start site region 79231
Tssr79232 8 106161272 to 106161283 11 + TSS region transcription start site region 79232
Tssr79233 8 106163096 to 106163117 21 + TSS region transcription start site region 79233
Cpgi20968 8 106168266 to 106169703 1437 CpG island CpG island 20968
Slc7a6 8 106168857 to 106198706 29849 + protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
Tssr79234 8 106168857 to 106168926 69 + TSS region transcription start site region 79234
Slc7a6os 8 106200717 to 106210935 10218 - protein coding gene solute carrier family 7, member 6 opposite strand
Tssr79235 8 106201330 to 106201334 4 + TSS region transcription start site region 79235
Tssr79236 8 106210144 to 106210151 7 + TSS region transcription start site region 79236
Cpgi20969 8 106210306 to 106211585 1279 CpG island CpG island 20969
Tssr82760 8 106210924 to 106210942 18 - TSS region transcription start site region 82760