Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:105961403-106061421

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc12a4 8 105943590 to 105966097 22507 - protein coding gene solute carrier family 12, member 4
Cpgi20960 8 105965312 to 105966406 1094 CpG island CpG island 20960
Tssr82738 8 105966038 to 105966120 82 - TSS region transcription start site region 82738
Tssr82739 8 105966126 to 105966137 11 - TSS region transcription start site region 82739
Tssr79201 8 105971558 to 105971576 18 + TSS region transcription start site region 79201
Gm45752 8 105973097 to 105985879 12782 + lincRNA gene predicted gene 45752
Dpep3 8 105973520 to 105979419 5899 - protein coding gene dipeptidase 3
Cpgi20961 8 105978949 to 105979570 621 CpG island CpG island 20961
Tssr82740 8 105979403 to 105979412 9 - TSS region transcription start site region 82740
Tssr82741 8 105979413 to 105979444 31 - TSS region transcription start site region 82741
Dpep2 8 105984945 to 106006347 21402 - protein coding gene dipeptidase 2
Gm22972 8 105988501 to 105988631 130 - snoRNA gene predicted gene, 22972
Tssr82742 8 105988740 to 105988763 23 - TSS region transcription start site region 82742
Tssr82743 8 105989396 to 105989408 12 - TSS region transcription start site region 82743
Tssr79202 8 105989741 to 105989757 16 + TSS region transcription start site region 79202
Tssr82744 8 105990720 to 105990748 28 - TSS region transcription start site region 82744
Cpgi20962 8 105990853 to 105991071 218 CpG island CpG island 20962
Tssr82745 8 105991714 to 105991733 19 - TSS region transcription start site region 82745
Tssr82746 8 105991741 to 105991752 11 - TSS region transcription start site region 82746
Dpep2nb 8 105995466 to 106005975 10509 - protein coding gene Dpep2 neighbor
Tssr82747 8 106007098 to 106007110 12 - TSS region transcription start site region 82747
Ddx28 8 106009616 to 106011486 1870 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
Cpgi20963 8 106010590 to 106011710 1120 CpG island CpG island 20963
Tssr82748 8 106011403 to 106011421 18 - TSS region transcription start site region 82748
Tssr82749 8 106011422 to 106011470 48 - TSS region transcription start site region 82749
Dus2 8 106011478 to 106053840 42362 + protein coding gene dihydrouridine synthase 2
Tssr79203 8 106011491 to 106011526 35 + TSS region transcription start site region 79203
Tssr82750 8 106052551 to 106052563 12 - TSS region transcription start site region 82750
Tssr82751 8 106052569 to 106052581 12 - TSS region transcription start site region 82751
Tssr79204 8 106052700 to 106052711 11 + TSS region transcription start site region 79204
Tssr79205 8 106052721 to 106052748 27 + TSS region transcription start site region 79205
Tssr79206 8 106053009 to 106053028 19 + TSS region transcription start site region 79206
Tssr79207 8 106053081 to 106053098 17 + TSS region transcription start site region 79207
Tssr79208 8 106054602 to 106054611 9 + TSS region transcription start site region 79208
Tssr82752 8 106058698 to 106058706 8 - TSS region transcription start site region 82752
Tssr79209 8 106058787 to 106058834 47 + TSS region transcription start site region 79209
Tssr79210 8 106058857 to 106058870 13 + TSS region transcription start site region 79210
Cpgi20964 8 106058968 to 106060325 1357 CpG island CpG island 20964
Tssr82753 8 106059228 to 106059247 19 - TSS region transcription start site region 82753
Tssr79211 8 106059562 to 106059623 61 + TSS region transcription start site region 79211
Nfatc3 8 106059584 to 106130537 70953 + protein coding gene nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
Tssr79212 8 106059650 to 106059695 45 + TSS region transcription start site region 79212
Tssr79213 8 106059783 to 106059793 10 + TSS region transcription start site region 79213