Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:105939396-106039408

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm16156 8 105934333 to 105945843 11510 + antisense lncRNA gene predicted gene 16156
Lcat 8 105939551 to 105943382 3831 - protein coding gene lecithin cholesterol acyltransferase
Tssr82729 8 105939779 to 105939787 8 - TSS region transcription start site region 82729
Tssr82730 8 105939826 to 105939864 38 - TSS region transcription start site region 82730
Tssr82731 8 105939902 to 105939913 11 - TSS region transcription start site region 82731
Tssr82732 8 105940060 to 105940097 37 - TSS region transcription start site region 82732
Tssr82733 8 105940121 to 105940145 24 - TSS region transcription start site region 82733
Tssr82734 8 105941666 to 105941680 14 - TSS region transcription start site region 82734
Tssr82735 8 105942362 to 105942403 41 - TSS region transcription start site region 82735
Tssr82736 8 105943277 to 105943288 11 - TSS region transcription start site region 82736
Tssr82737 8 105943389 to 105943407 18 - TSS region transcription start site region 82737
Slc12a4 8 105943590 to 105966097 22507 - protein coding gene solute carrier family 12, member 4
Mir7074 8 105951637 to 105951699 62 - miRNA gene microRNA 7074
Cpgi20960 8 105965312 to 105966406 1094 CpG island CpG island 20960
Tssr82738 8 105966038 to 105966120 82 - TSS region transcription start site region 82738
Tssr82739 8 105966126 to 105966137 11 - TSS region transcription start site region 82739
Tssr79201 8 105971558 to 105971576 18 + TSS region transcription start site region 79201
Gm45752 8 105973097 to 105985879 12782 + lincRNA gene predicted gene 45752
Dpep3 8 105973520 to 105979419 5899 - protein coding gene dipeptidase 3
Cpgi20961 8 105978949 to 105979570 621 CpG island CpG island 20961
Tssr82740 8 105979403 to 105979412 9 - TSS region transcription start site region 82740
Tssr82741 8 105979413 to 105979444 31 - TSS region transcription start site region 82741
Dpep2 8 105984945 to 106006347 21402 - protein coding gene dipeptidase 2
Gm22972 8 105988501 to 105988631 130 - snoRNA gene predicted gene, 22972
Tssr82742 8 105988740 to 105988763 23 - TSS region transcription start site region 82742
Tssr82743 8 105989396 to 105989408 12 - TSS region transcription start site region 82743
Tssr79202 8 105989741 to 105989757 16 + TSS region transcription start site region 79202
Tssr82744 8 105990720 to 105990748 28 - TSS region transcription start site region 82744
Cpgi20962 8 105990853 to 105991071 218 CpG island CpG island 20962
Tssr82745 8 105991714 to 105991733 19 - TSS region transcription start site region 82745
Tssr82746 8 105991741 to 105991752 11 - TSS region transcription start site region 82746
Dpep2nb 8 105995466 to 106005975 10509 - protein coding gene Dpep2 neighbor
Tssr82747 8 106007098 to 106007110 12 - TSS region transcription start site region 82747
Ddx28 8 106009616 to 106011486 1870 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
Cpgi20963 8 106010590 to 106011710 1120 CpG island CpG island 20963
Tssr82748 8 106011403 to 106011421 18 - TSS region transcription start site region 82748
Tssr82749 8 106011422 to 106011470 48 - TSS region transcription start site region 82749
Dus2 8 106011478 to 106053840 42362 + protein coding gene dihydrouridine synthase 2
Tssr79203 8 106011491 to 106011526 35 + TSS region transcription start site region 79203