Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:105641142-105761190

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctcf 8 105636568 to 105682922 46354 + protein coding gene CCCTC-binding factor
Tssr79174 8 105649319 to 105649323 4 + TSS region transcription start site region 79174
Gm5915 8 105660334 to 105660787 453 - pseudogene predicted pseudogene 5915
Tssr79175 8 105664167 to 105664179 12 + TSS region transcription start site region 79175
Tssr2677 8 105664297 to 105664312 15 + TSS region transcription start site region 2677
Gm33578 8 105682815 to 105686220 3405 - lncRNA gene predicted gene, 33578
Cpgi20944 8 105685892 to 105686282 390 CpG island CpG island 20944
Tssr79176 8 105685987 to 105686001 14 + TSS region transcription start site region 79176
Tssr79177 8 105686027 to 105686056 29 + TSS region transcription start site region 79177
Tssr79178 8 105686146 to 105686228 82 + TSS region transcription start site region 79178
Tssr79179 8 105686231 to 105686270 39 + TSS region transcription start site region 79179
Tssr79180 8 105686273 to 105686293 20 + TSS region transcription start site region 79180
Carmil2 8 105686274 to 105698187 11913 + protein coding gene capping protein regulator and myosin 1 linker 2
Cpgi20945 8 105689308 to 105689983 675 CpG island CpG island 20945
Cpgi20946 8 105693691 to 105694710 1019 CpG island CpG island 20946
Tssr79181 8 105693826 to 105693880 54 + TSS region transcription start site region 79181
Tssr79182 8 105693926 to 105694013 87 + TSS region transcription start site region 79182
Cpgi20947 8 105695292 to 105695567 275 CpG island CpG island 20947
Acd 8 105698157 to 105701290 3133 - protein coding gene adrenocortical dysplasia
Tssr82684 8 105698807 to 105698846 39 - TSS region transcription start site region 82684
Cpgi20948 8 105700309 to 105702364 2055 CpG island CpG island 20948
Tssr82685 8 105701048 to 105701063 15 - TSS region transcription start site region 82685
Tssr82686 8 105701077 to 105701118 41 - TSS region transcription start site region 82686
Tssr79183 8 105701142 to 105701190 48 + TSS region transcription start site region 79183
Pard6a 8 105701148 to 105703494 2346 + protein coding gene par-6 family cell polarity regulator alpha
Tssr79184 8 105701624 to 105701693 69 + TSS region transcription start site region 79184
Enkd1 8 105703651 to 105708210 4559 - protein coding gene enkurin domain containing 1
Cpgi20949 8 105704120 to 105704614 494 CpG island CpG island 20949
Tssr82687 8 105704712 to 105704742 30 - TSS region transcription start site region 82687
Cpgi20950 8 105707496 to 105708203 707 CpG island CpG island 20950
Tssr82688 8 105708172 to 105708223 51 - TSS region transcription start site region 82688
Tssr79185 8 105708251 to 105708261 10 + TSS region transcription start site region 79185
Tssr79186 8 105708270 to 105708302 32 + TSS region transcription start site region 79186
4933405L10Rik 8 105708289 to 105710246 1957 + protein coding gene RIKEN cDNA 4933405L10 gene
Tssr79187 8 105708318 to 105708326 8 + TSS region transcription start site region 79187
Gfod2 8 105714046 to 105758665 44619 - protein coding gene glucose-fructose oxidoreductase domain containing 2
Cpgi20951 8 105717294 to 105717663 369 CpG island CpG island 20951
Cpgi20952 8 105758122 to 105758828 706 CpG island CpG island 20952
Tssr82689 8 105758570 to 105758657 87 - TSS region transcription start site region 82689