Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:105525355-105607089

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp6v0d1 8 105524470 to 105566040 41570 - protein coding gene ATPase, H+ transporting, lysosomal V0 subunit D1
Tssr82663 8 105525357 to 105525371 14 - TSS region transcription start site region 82663
Tssr82664 8 105525380 to 105525394 14 - TSS region transcription start site region 82664
Tssr82665 8 105529376 to 105529415 39 - TSS region transcription start site region 82665
D8Mit198 8 105541565 to 105541762 197 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 198
Tssr82666 8 105549621 to 105549640 19 - TSS region transcription start site region 82666
D8Dcr39 8 105561758 to 105561859 101 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 39
Cpgi20938 8 105565355 to 105567089 1734 CpG island CpG island 20938
Tssr82667 8 105565906 to 105565914 8 - TSS region transcription start site region 82667
Tssr82668 8 105565921 to 105565947 26 - TSS region transcription start site region 82668
Tssr82669 8 105565957 to 105565982 25 - TSS region transcription start site region 82669
Tssr82670 8 105565985 to 105566071 86 - TSS region transcription start site region 82670
Tssr79153 8 105566171 to 105566187 16 + TSS region transcription start site region 79153
Gm38250 8 105566324 to 105578109 11785 + antisense lncRNA gene predicted gene, 38250
Agrp 8 105566695 to 105579845 13150 - protein coding gene agouti related neuropeptide
Tssr82671 8 105567632 to 105567648 16 - TSS region transcription start site region 82671
Tssr82672 8 105579855 to 105579864 9 - TSS region transcription start site region 82672
Gm45855 8 105585321 to 105586200 879 - pseudogene predicted gene 45855
Tssr79154 8 105594069 to 105594088 19 + TSS region transcription start site region 79154
Tssr79155 8 105595093 to 105595102 9 + TSS region transcription start site region 79155
Tssr79156 8 105595134 to 105595156 22 + TSS region transcription start site region 79156
Tssr79157 8 105595194 to 105595203 9 + TSS region transcription start site region 79157
Tssr79158 8 105602824 to 105602826 2 + TSS region transcription start site region 79158
Cpgi20939 8 105604667 to 105606026 1359 CpG island CpG island 20939
Tssr79159 8 105605022 to 105605040 18 + TSS region transcription start site region 79159
Tssr79160 8 105605041 to 105605056 15 + TSS region transcription start site region 79160
Tssr79161 8 105605220 to 105605306 86 + TSS region transcription start site region 79161
Ripor1 8 105605255 to 105622219 16964 + protein coding gene RHO family interacting cell polarization regulator 1
Cpgi20940 8 105606502 to 105606719 217 CpG island CpG island 20940
Tssr82673 8 105606682 to 105606693 11 - TSS region transcription start site region 82673
Tssr82674 8 105606698 to 105606710 12 - TSS region transcription start site region 82674