Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:105321406-105351972

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrrc29 8 105312340 to 105326339 13999 - protein coding gene leucine rich repeat containing 29
Tssr82641 8 105322346 to 105322351 5 - TSS region transcription start site region 82641
Tssr82642 8 105323320 to 105323336 16 - TSS region transcription start site region 82642
Tssr79133 8 105323439 to 105323450 11 + TSS region transcription start site region 79133
Cpgi20926 8 105325846 to 105326866 1020 CpG island CpG island 20926
Tssr82643 8 105326252 to 105326278 26 - TSS region transcription start site region 82643
Tssr82644 8 105326281 to 105326301 20 - TSS region transcription start site region 82644
Tssr79134 8 105326354 to 105326411 57 + TSS region transcription start site region 79134
Tmem208 8 105326354 to 105335219 8865 + protein coding gene transmembrane protein 208
Tssr79135 8 105326419 to 105326441 22 + TSS region transcription start site region 79135
Fhod1 8 105329163 to 105347953 18790 - protein coding gene formin homology 2 domain containing 1
Cpgi20927 8 105336406 to 105336972 566 CpG island CpG island 20927
Gm46049 8 105344210 to 105347645 3435 + lncRNA gene predicted gene, 46049
Tssr79136 8 105345339 to 105345342 3 + TSS region transcription start site region 79136
Cpgi20928 8 105346898 to 105347281 383 CpG island CpG island 20928
Cpgi20929 8 105347460 to 105348177 717 CpG island CpG island 20929
Tssr82645 8 105347885 to 105347940 55 - TSS region transcription start site region 82645
Tssr82646 8 105347941 to 105347975 34 - TSS region transcription start site region 82646
Tssr79137 8 105348092 to 105348099 7 + TSS region transcription start site region 79137
Tssr79138 8 105348163 to 105348190 27 + TSS region transcription start site region 79138
Cpgi20930 8 105348676 to 105349870 1194 CpG island CpG island 20930
Slc9a5 8 105348843 to 105369881 21038 + protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 5
Tssr82647 8 105349210 to 105349222 12 - TSS region transcription start site region 82647
Tssr82648 8 105349223 to 105349234 11 - TSS region transcription start site region 82648
Tssr82649 8 105349250 to 105349269 19 - TSS region transcription start site region 82649
Tssr79139 8 105349295 to 105349369 74 + TSS region transcription start site region 79139