Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 8:105273265-105473277

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96 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hsf4 8 105269801 to 105275845 6044 + protein coding gene heat shock transcription factor 4
Nol3 8 105276145 to 105281939 5794 + protein coding gene nucleolar protein 3 (apoptosis repressor with CARD domain)
Cpgi20919 8 105276240 to 105276706 466 CpG island CpG island 20919
Tssr79118 8 105276383 to 105276426 43 + TSS region transcription start site region 79118
Tssr79119 8 105276432 to 105276436 4 + TSS region transcription start site region 79119
Tssr79120 8 105276438 to 105276482 44 + TSS region transcription start site region 79120
Cpgi20920 8 105278817 to 105279676 859 CpG island CpG island 20920
Tssr79121 8 105279325 to 105279345 20 + TSS region transcription start site region 79121
Tssr79122 8 105279363 to 105279374 11 + TSS region transcription start site region 79122
4931428F04Rik 8 105280409 to 105289528 9119 - protein coding gene RIKEN cDNA 4931428F04 gene
Tssr82630 8 105281425 to 105281440 15 - TSS region transcription start site region 82630
Tssr82631 8 105281490 to 105281508 18 - TSS region transcription start site region 82631
Cpgi20921 8 105283029 to 105283483 454 CpG island CpG island 20921
Tssr82632 8 105283213 to 105283236 23 - TSS region transcription start site region 82632
Tssr82633 8 105283238 to 105283276 38 - TSS region transcription start site region 82633
Cpgi20922 8 105288890 to 105291115 2225 CpG island CpG island 20922
Tssr82634 8 105289068 to 105289083 15 - TSS region transcription start site region 82634
Tssr82635 8 105289084 to 105289114 30 - TSS region transcription start site region 82635
Tssr82636 8 105289120 to 105289138 18 - TSS region transcription start site region 82636
Tssr82637 8 105289465 to 105289541 76 - TSS region transcription start site region 82637
Gm20163 8 105289678 to 105291485 1807 + lncRNA gene predicted gene, 20163
Tssr82638 8 105289875 to 105289886 11 - TSS region transcription start site region 82638
Exoc3l 8 105289924 to 105296101 6177 - protein coding gene exocyst complex component 3-like
Tssr79123 8 105289983 to 105290009 26 + TSS region transcription start site region 79123
Cpgi20923 8 105293196 to 105293780 584 CpG island CpG island 20923
Tssr82639 8 105295934 to 105295948 14 - TSS region transcription start site region 82639
Tssr82640 8 105296044 to 105296110 66 - TSS region transcription start site region 82640
A930018C05Rik 8 105297221 to 105297617 396 lncRNA gene RIKEN cDNA A930018C05 gene
Cpgi20924 8 105297439 to 105298418 979 CpG island CpG island 20924
E2f4 8 105297663 to 105305370 7707 + protein coding gene E2F transcription factor 4
Tssr79124 8 105297663 to 105297742 79 + TSS region transcription start site region 79124
Tssr79125 8 105300235 to 105300277 42 + TSS region transcription start site region 79125
Tssr79126 8 105300395 to 105300446 51 + TSS region transcription start site region 79126
Tssr79127 8 105302548 to 105302552 4 + TSS region transcription start site region 79127
Tssr79128 8 105304095 to 105304104 9 + TSS region transcription start site region 79128
Tssr79129 8 105304127 to 105304144 17 + TSS region transcription start site region 79129
Tssr79130 8 105304568 to 105304597 29 + TSS region transcription start site region 79130
Tssr79131 8 105304746 to 105304772 26 + TSS region transcription start site region 79131
Tssr79132 8 105305572 to 105305619 47 + TSS region transcription start site region 79132
Elmo3 8 105305601 to 105310760 5159 + protein coding gene engulfment and cell motility 3
Cpgi20925 8 105305606 to 105305862 256 CpG island CpG island 20925
Gm27320 8 105307792 to 105307900 108 - miRNA gene predicted gene, 27320
Mir328 8 105308364 to 105308460 96 - miRNA gene microRNA 328
Lrrc29 8 105312340 to 105326320 13980 - protein coding gene leucine rich repeat containing 29
Tssr82641 8 105322346 to 105322351 5 - TSS region transcription start site region 82641
Tssr82642 8 105323320 to 105323336 16 - TSS region transcription start site region 82642
Tssr79133 8 105323439 to 105323450 11 + TSS region transcription start site region 79133
Cpgi20926 8 105325846 to 105326866 1020 CpG island CpG island 20926
Tssr82643 8 105326252 to 105326278 26 - TSS region transcription start site region 82643
Tssr82644 8 105326281 to 105326301 20 - TSS region transcription start site region 82644
Tmem208 8 105326354 to 105335219 8865 + protein coding gene transmembrane protein 208
Tssr79134 8 105326354 to 105326411 57 + TSS region transcription start site region 79134
Tssr79135 8 105326419 to 105326441 22 + TSS region transcription start site region 79135
Fhod1 8 105329163 to 105347953 18790 - protein coding gene formin homology 2 domain containing 1
Cpgi20927 8 105336406 to 105336972 566 CpG island CpG island 20927
Tssr79136 8 105345339 to 105345342 3 + TSS region transcription start site region 79136
Gm46049 8 105345770 to 105347656 1886 + lncRNA gene predicted gene, 46049
Cpgi20928 8 105346898 to 105347281 383 CpG island CpG island 20928
Cpgi20929 8 105347460 to 105348177 717 CpG island CpG island 20929
Tssr82645 8 105347885 to 105347940 55 - TSS region transcription start site region 82645
Tssr82646 8 105347941 to 105347975 34 - TSS region transcription start site region 82646
Tssr79137 8 105348092 to 105348099 7 + TSS region transcription start site region 79137
Tssr79138 8 105348163 to 105348190 27 + TSS region transcription start site region 79138
Cpgi20930 8 105348676 to 105349870 1194 CpG island CpG island 20930
Slc9a5 8 105348843 to 105369881 21038 + protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 5
Tssr82647 8 105349210 to 105349222 12 - TSS region transcription start site region 82647
Tssr82648 8 105349223 to 105349234 11 - TSS region transcription start site region 82648
Tssr82649 8 105349250 to 105349269 19 - TSS region transcription start site region 82649
Tssr79139 8 105349295 to 105349369 74 + TSS region transcription start site region 79139
Tssr79140 8 105373265 to 105373277 12 + TSS region transcription start site region 79140
Plekhg4 8 105373274 to 105382862 9588 + protein coding gene pleckstrin homology domain containing, family G (with RhoGef domain) member 4
Cpgi20931 8 105374453 to 105375172 719 CpG island CpG island 20931
Kctd19 8 105382807 to 105413502 30695 - protein coding gene potassium channel tetramerisation domain containing 19
Tssr82650 8 105403811 to 105403813 2 - TSS region transcription start site region 82650
Cpgi20932 8 105413302 to 105413842 540 CpG island CpG island 20932
Tssr82651 8 105413459 to 105413465 6 - TSS region transcription start site region 82651
Tssr82652 8 105413473 to 105413526 53 - TSS region transcription start site region 82652
Lrrc36 8 105413598 to 105464086 50488 + protein coding gene leucine rich repeat containing 36
Tssr79141 8 105413614 to 105413631 17 + TSS region transcription start site region 79141
Tssr79142 8 105427587 to 105427619 32 + TSS region transcription start site region 79142
Tssr79143 8 105427622 to 105427633 11 + TSS region transcription start site region 79143
Tssr79144 8 105427634 to 105427646 12 + TSS region transcription start site region 79144
Tssr79145 8 105427648 to 105427672 24 + TSS region transcription start site region 79145
Tssr79146 8 105438802 to 105438807 5 + TSS region transcription start site region 79146
Tssr79147 8 105453562 to 105453566 4 + TSS region transcription start site region 79147
Tssr79148 8 105455276 to 105455287 11 + TSS region transcription start site region 79148
Tppp3 8 105467492 to 105471422 3930 - protein coding gene tubulin polymerization-promoting protein family member 3
Cpgi20933 8 105467888 to 105468631 743 CpG island CpG island 20933
Tssr82653 8 105467905 to 105467934 29 - TSS region transcription start site region 82653
Cpgi20934 8 105471153 to 105471620 467 CpG island CpG island 20934
Tssr82654 8 105471328 to 105471343 15 - TSS region transcription start site region 82654
Tssr82655 8 105471383 to 105471400 17 - TSS region transcription start site region 82655
Tssr82656 8 105471447 to 105471458 11 - TSS region transcription start site region 82656
Tssr82657 8 105471481 to 105471487 6 - TSS region transcription start site region 82657
Zdhhc1 8 105472423 to 105496902 24479 - protein coding gene zinc finger, DHHC domain containing 1
Cpgi20935 8 105472461 to 105472741 280 CpG island CpG island 20935