Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:104287271-104598786

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cmtm2a 8 104281042 to 104293181 12139 - protein coding gene CKLF-like MARVEL transmembrane domain containing 2A
Gm45711 8 104281347 to 104310081 28734 - protein coding gene predicted gene 45711
Tssr82597 8 104293193 to 104293204 11 - TSS region transcription start site region 82597
Cmtm1 8 104293542 to 104310145 16603 - protein coding gene CKLF-like MARVEL transmembrane domain containing 1
Tssr79043 8 104295730 to 104295733 3 + TSS region transcription start site region 79043
Cpgi20898 8 104309353 to 104309704 351 CpG island CpG island 20898
Tssr82598 8 104310052 to 104310102 50 - TSS region transcription start site region 82598
Tssr82599 8 104310109 to 104310110 1 - TSS region transcription start site region 82599
Gm45710 8 104310832 to 104312769 1937 - pseudogene predicted gene 45710
Gm11020 8 104321567 to 104321787 220 + unclassified gene predicted gene 11020
Tssr79044 8 104322204 to 104322237 33 + TSS region transcription start site region 79044
Cmtm2b 8 104322230 to 104330764 8534 + protein coding gene CKLF-like MARVEL transmembrane domain containing 2B
Tssr2674 8 104322257 to 104322268 11 + TSS region transcription start site region 2674
Tssr79045 8 104322324 to 104322367 43 + TSS region transcription start site region 79045
Tssr79046 8 104322378 to 104322389 11 + TSS region transcription start site region 79046
Gm45878 8 104324440 to 104324680 240 - pseudogene predicted gene 45878
Tssr79047 8 104339347 to 104339396 49 + TSS region transcription start site region 79047
Cmtm3 8 104339410 to 104347672 8262 + protein coding gene CKLF-like MARVEL transmembrane domain containing 3
Cpgi20899 8 104340258 to 104341401 1143 CpG island CpG island 20899
Tssr79048 8 104340292 to 104340341 49 + TSS region transcription start site region 79048
Tssr79049 8 104340348 to 104340379 31 + TSS region transcription start site region 79049
Tssr79050 8 104340385 to 104340403 18 + TSS region transcription start site region 79050
Tssr82600 8 104340389 to 104340438 49 - TSS region transcription start site region 82600
Tssr79051 8 104340617 to 104340622 5 + TSS region transcription start site region 79051
Tssr79052 8 104340647 to 104340658 11 + TSS region transcription start site region 79052
Tssr79053 8 104340664 to 104340704 40 + TSS region transcription start site region 79053
Tssr79054 8 104340709 to 104340723 14 + TSS region transcription start site region 79054
Tssr79055 8 104340729 to 104340751 22 + TSS region transcription start site region 79055
Tssr79056 8 104340760 to 104340771 11 + TSS region transcription start site region 79056
Tssr79057 8 104340773 to 104340789 16 + TSS region transcription start site region 79057
Tssr79058 8 104345273 to 104345293 20 + TSS region transcription start site region 79058
Tssr79059 8 104346953 to 104346995 42 + TSS region transcription start site region 79059
Tssr79060 8 104347459 to 104347472 13 + TSS region transcription start site region 79060
Cmtm4 8 104348191 to 104395807 47616 - protein coding gene CKLF-like MARVEL transmembrane domain containing 4
Gm45877 8 104362602 to 104363668 1066 - sense intronic lncRNA gene predicted gene 45877
Cpgi20900 8 104394959 to 104396318 1359 CpG island CpG island 20900
Tssr82601 8 104395765 to 104395858 93 - TSS region transcription start site region 82601
Tssr82602 8 104395873 to 104395886 13 - TSS region transcription start site region 82602
Dync1li2 8 104417680 to 104443047 25367 - protein coding gene dynein, cytoplasmic 1 light intermediate chain 2
Tssr79061 8 104430724 to 104430727 3 + TSS region transcription start site region 79061
Cpgi20901 8 104436014 to 104436244 230 CpG island CpG island 20901
Tssr82603 8 104437639 to 104437657 18 - TSS region transcription start site region 82603
Gm45731 8 104438260 to 104439462 1202 + unclassified gene predicted gene 45731
Tssr82604 8 104441608 to 104441609 1 - TSS region transcription start site region 82604
Cpgi20902 8 104442044 to 104443145 1101 CpG island CpG island 20902
K230015D01Rik 8 104442271 to 104443786 1515 + antisense lncRNA gene RIKEN cDNA K230015D01 gene
Tssr82605 8 104442804 to 104442836 32 - TSS region transcription start site region 82605
Tssr82606 8 104442902 to 104442920 18 - TSS region transcription start site region 82606
Tssr2675 8 104442928 to 104442935 7 - TSS region transcription start site region 2675
Tssr82607 8 104442944 to 104442955 11 - TSS region transcription start site region 82607
Tssr82608 8 104442971 to 104442976 5 - TSS region transcription start site region 82608
Tssr82609 8 104443001 to 104443025 24 - TSS region transcription start site region 82609
Tssr82610 8 104443033 to 104443044 11 - TSS region transcription start site region 82610
Terb1 8 104446718 to 104509887 63169 - protein coding gene telomere repeat binding bouquet formation protein 1
Gm22148 8 104507902 to 104508008 106 + snRNA gene predicted gene, 22148
Cpgi20903 8 104509072 to 104510072 1000 CpG island CpG island 20903
Tssr82611 8 104509874 to 104509894 20 - TSS region transcription start site region 82611
Nae1 8 104511028 to 104534637 23609 - protein coding gene NEDD8 activating enzyme E1 subunit 1
Cpgi20904 8 104534054 to 104534798 744 CpG island CpG island 20904
Tssr82612 8 104534568 to 104534624 56 - TSS region transcription start site region 82612
Tssr82613 8 104534630 to 104534646 16 - TSS region transcription start site region 82613
Car7 8 104534694 to 104550347 15653 + protein coding gene carbonic anhydrase 7
Tssr79062 8 104535053 to 104535081 28 + TSS region transcription start site region 79062
Cpgi20905 8 104540550 to 104541763 1213 CpG island CpG island 20905
Tssr79063 8 104540770 to 104540784 14 + TSS region transcription start site region 79063
Tssr79064 8 104540800 to 104540816 16 + TSS region transcription start site region 79064
Tssr79065 8 104540822 to 104540835 13 + TSS region transcription start site region 79065
Cpgi20906 8 104542085 to 104542383 298 CpG island CpG island 20906
Tssr82614 8 104549988 to 104550014 26 - TSS region transcription start site region 82614
Gm45843 8 104551907 to 104556987 5080 - lincRNA gene predicted gene 45843
Gm6825 8 104577591 to 104577796 205 - pseudogene predicted gene 6825
Cpgi20907 8 104591250 to 104591948 698 CpG island CpG island 20907
Tssr79066 8 104591440 to 104591454 14 + TSS region transcription start site region 79066
Tssr79067 8 104591464 to 104591505 41 + TSS region transcription start site region 79067
Pdp2 8 104591468 to 104599026 7558 + protein coding gene pyruvate dehyrogenase phosphatase catalytic subunit 2
Tssr79068 8 104591510 to 104591520 10 + TSS region transcription start site region 79068
Tssr79069 8 104595356 to 104595361 5 + TSS region transcription start site region 79069