Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:99836066-100176085

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spcs2 7 99837569 to 99863462 25893 - protein coding gene signal peptidase complex subunit 2 homolog (S. cerevisiae)
Tssr73711 7 99858300 to 99858303 3 - TSS region transcription start site region 73711
Cpgi19472 7 99858508 to 99859329 821 CpG island CpG island 19472
Tssr73712 7 99858872 to 99858906 34 - TSS region transcription start site region 73712
Tssr73713 7 99858910 to 99858921 11 - TSS region transcription start site region 73713
Tssr73714 7 99858992 to 99859007 15 - TSS region transcription start site region 73714
Tssr68077 7 99859059 to 99859120 61 + TSS region transcription start site region 68077
Tssr68078 7 99859123 to 99859140 17 + TSS region transcription start site region 68078
Xrra1 7 99859218 to 99917824 58606 + protein coding gene X-ray radiation resistance associated 1
Tssr73715 7 99862664 to 99862665 1 - TSS region transcription start site region 73715
Tssr73716 7 99863356 to 99863374 18 - TSS region transcription start site region 73716
Tssr68079 7 99863494 to 99863504 10 + TSS region transcription start site region 68079
Tssr73717 7 99865320 to 99865337 17 - TSS region transcription start site region 73717
Tssr73718 7 99865351 to 99865367 16 - TSS region transcription start site region 73718
Gm38405 7 99870666 to 99889358 18692 - antisense lncRNA gene predicted gene, 38405
Tssr2341 7 99879734 to 99879744 10 - TSS region transcription start site region 2341
Tssr73719 7 99889292 to 99889303 11 - TSS region transcription start site region 73719
Tssr73720 7 99889326 to 99889368 42 - TSS region transcription start site region 73720
A930030B08Rik 7 99900192 to 99904156 3964 - unclassified gene RIKEN cDNA A930030B08 gene
Tssr73721 7 99906206 to 99906217 11 - TSS region transcription start site region 73721
Tssr73722 7 99906224 to 99906231 7 - TSS region transcription start site region 73722
Tssr68080 7 99906326 to 99906353 27 + TSS region transcription start site region 68080
Tssr68081 7 99906407 to 99906415 8 + TSS region transcription start site region 68081
Tssr68082 7 99906443 to 99906450 7 + TSS region transcription start site region 68082
Tssr68083 7 99906516 to 99906525 9 + TSS region transcription start site region 68083
Tssr68084 7 99906532 to 99906536 4 + TSS region transcription start site region 68084
Tssr68085 7 99906537 to 99906552 15 + TSS region transcription start site region 68085
Tssr68086 7 99915789 to 99915792 3 + TSS region transcription start site region 68086
Cpgi19473 7 99916719 to 99918015 1296 CpG island CpG island 19473
Tssr73723 7 99917402 to 99917431 29 - TSS region transcription start site region 73723
Rnf169 7 99920254 to 99980448 60194 - protein coding gene ring finger protein 169
Tssr73724 7 99922346 to 99922367 21 - TSS region transcription start site region 73724
Gm5115 7 99929646 to 99932287 2641 - unclassified gene predicted gene 5115
D7Wsu69e 7 99936426 to 99936675 249 DNA segment DNA segment, Chr 7, Wayne State University 69, expressed
Gm18959 7 99945062 to 99945624 562 + pseudogene predicted gene, 18959
Tssr73725 7 99965708 to 99965728 20 - TSS region transcription start site region 73725
Cpgi19474 7 99979553 to 99980559 1006 CpG island CpG island 19474
Tssr68087 7 99979710 to 99979732 22 + TSS region transcription start site region 68087
Tssr68088 7 99979755 to 99979771 16 + TSS region transcription start site region 68088
Tssr73726 7 99980408 to 99980417 9 - TSS region transcription start site region 73726
Tssr73727 7 99980431 to 99980477 46 - TSS region transcription start site region 73727
Gm17931 7 99996775 to 99997405 630 + pseudogene predicted gene, 17931
Cpgi19475 7 100005712 to 100006833 1121 CpG island CpG island 19475
Tssr68089 7 100006018 to 100006023 5 + TSS region transcription start site region 68089
Tssr68090 7 100006034 to 100006064 30 + TSS region transcription start site region 68090
Tssr68091 7 100006066 to 100006085 19 + TSS region transcription start site region 68091
Chrdl2 7 100006404 to 100034728 28324 + protein coding gene chordin-like 2
Cpgi19476 7 100042086 to 100042613 527 CpG island CpG island 19476
Pold3 7 100082111 to 100121560 39449 - protein coding gene polymerase (DNA-directed), delta 3, accessory subunit
Tssr68092 7 100100287 to 100100334 47 + TSS region transcription start site region 68092
Tssr73728 7 100101433 to 100101460 27 - TSS region transcription start site region 73728
Tssr73729 7 100113847 to 100113850 3 - TSS region transcription start site region 73729
Tssr73730 7 100120523 to 100120549 26 - TSS region transcription start site region 73730
Cpgi19477 7 100120852 to 100121842 990 CpG island CpG island 19477
Tssr73731 7 100121046 to 100121094 48 - TSS region transcription start site region 73731
Tssr73732 7 100121432 to 100121442 10 - TSS region transcription start site region 73732
Tssr73733 7 100121446 to 100121511 65 - TSS region transcription start site region 73733
Tssr73734 7 100121512 to 100121524 12 - TSS region transcription start site region 73734
Gm34760 7 100131880 to 100137487 5607 + lncRNA gene predicted gene, 34760
Cpgi19478 7 100159015 to 100160279 1264 CpG island CpG island 19478
Tssr68093 7 100159241 to 100159315 74 + TSS region transcription start site region 68093
Lipt2 7 100159277 to 100160931 1654 + protein coding gene lipoyl(octanoyl) transferase 2 (putative)
Tssr68094 7 100159317 to 100159330 13 + TSS region transcription start site region 68094
Gm39057 7 100163323 to 100171156 7833 - lncRNA gene predicted gene, 39057
Tssr68095 7 100172455 to 100172457 2 + TSS region transcription start site region 68095
Gm34821 7 100173423 to 100176631 3208 - antisense lncRNA gene predicted gene, 34821