Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:99331415-99510984

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Map6 7 99267447 to 99337137 69690 + protein coding gene microtubule-associated protein 6
Tssr68054 7 99334811 to 99334812 1 + TSS region transcription start site region 68054
Serpinh1 7 99345376 to 99353239 7863 - protein coding gene serine (or cysteine) peptidase inhibitor, clade H, member 1
Tssr73674 7 99345487 to 99345519 32 - TSS region transcription start site region 73674
Tssr73675 7 99345995 to 99346009 14 - TSS region transcription start site region 73675
Tssr73676 7 99347136 to 99347166 30 - TSS region transcription start site region 73676
Cpgi19462 7 99348756 to 99349238 482 CpG island CpG island 19462
Tssr68055 7 99348914 to 99348931 17 + TSS region transcription start site region 68055
Tssr73677 7 99348998 to 99349049 51 - TSS region transcription start site region 73677
Tssr73678 7 99349078 to 99349103 25 - TSS region transcription start site region 73678
Tssr73679 7 99349121 to 99349152 31 - TSS region transcription start site region 73679
Tssr73680 7 99349165 to 99349177 12 - TSS region transcription start site region 73680
Tssr73681 7 99350162 to 99350168 6 - TSS region transcription start site region 73681
Cpgi19463 7 99352751 to 99353152 401 CpG island CpG island 19463
Tssr73682 7 99353104 to 99353121 17 - TSS region transcription start site region 73682
Tssr2336 7 99353223 to 99353234 11 - TSS region transcription start site region 2336
Cpgi19464 7 99380986 to 99382411 1425 CpG island CpG island 19464
Gdpd5 7 99381415 to 99460984 79569 + protein coding gene glycerophosphodiester phosphodiesterase domain containing 5
Tssr68056 7 99381495 to 99381555 60 + TSS region transcription start site region 68056
Tssr73683 7 99382297 to 99382313 16 - TSS region transcription start site region 73683
Tssr73684 7 99382320 to 99382340 20 - TSS region transcription start site region 73684
Klhl35 7 99466004 to 99474022 8018 + protein coding gene kelch-like 35
Tssr68057 7 99466021 to 99466032 11 + TSS region transcription start site region 68057
Cpgi19465 7 99467566 to 99467725 159 CpG island CpG island 19465
Cpgi19466 7 99468000 to 99469300 1300 CpG island CpG island 19466
Cpgi19467 7 99471667 to 99472005 338 CpG island CpG island 19467
Rps3 7 99477896 to 99483709 5813 - protein coding gene ribosomal protein S3
Tssr73685 7 99478596 to 99478599 3 - TSS region transcription start site region 73685
Tssr68058 7 99478881 to 99478916 35 + TSS region transcription start site region 68058
Snord15b 7 99479563 to 99479707 144 - snoRNA gene small nucleolar RNA, C/D box 14B
Tssr73686 7 99479702 to 99479707 5 - TSS region transcription start site region 73686
Tssr73687 7 99480008 to 99480029 21 - TSS region transcription start site region 73687
Tssr73688 7 99482323 to 99482334 11 - TSS region transcription start site region 73688
Snord15a 7 99482785 to 99482932 147 - snoRNA gene small nucleolar RNA, C/D box 15A
Tssr73689 7 99482926 to 99482934 8 - TSS region transcription start site region 73689
Cpgi19468 7 99483151 to 99483730 579 CpG island CpG island 19468
Tssr73690 7 99483645 to 99483654 9 - TSS region transcription start site region 73690
n-R5s156 7 99497718 to 99497822 104 + rRNA gene nuclear encoded rRNA 5S 156
Gm39056 7 99500464 to 99505945 5481 + lncRNA gene predicted gene, 39056