Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:99261415-99580984

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26705 7 99260481 to 99267218 6737 - lincRNA gene predicted gene, 26705
Cpgi19461 7 99267338 to 99269546 2208 CpG island CpG island 19461
Tssr68042 7 99267397 to 99267406 9 + TSS region transcription start site region 68042
Tssr68043 7 99267428 to 99267438 10 + TSS region transcription start site region 68043
Map6 7 99267447 to 99337137 69690 + protein coding gene microtubule-associated protein 6
Tssr68044 7 99267470 to 99267517 47 + TSS region transcription start site region 68044
Tssr68045 7 99267553 to 99267564 11 + TSS region transcription start site region 68045
Tssr68046 7 99268338 to 99268388 50 + TSS region transcription start site region 68046
Tssr68047 7 99268392 to 99268420 28 + TSS region transcription start site region 68047
Tssr68048 7 99269071 to 99269086 15 + TSS region transcription start site region 68048
Tssr68049 7 99269115 to 99269129 14 + TSS region transcription start site region 68049
Tssr68050 7 99269179 to 99269200 21 + TSS region transcription start site region 68050
Tssr68051 7 99296521 to 99296523 2 + TSS region transcription start site region 68051
Gm40449 7 99300274 to 99304493 4219 - lncRNA gene predicted gene, 40449
Tssr68052 7 99313393 to 99313423 30 + TSS region transcription start site region 68052
D7Mit149 7 99314877 to 99315026 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 149
Gm45591 7 99321200 to 99322455 1255 + sense intronic lncRNA gene predicted gene 45591
Tssr68053 7 99323185 to 99323191 6 + TSS region transcription start site region 68053
Tssr68054 7 99334811 to 99334812 1 + TSS region transcription start site region 68054
Serpinh1 7 99345376 to 99353239 7863 - protein coding gene serine (or cysteine) peptidase inhibitor, clade H, member 1
Tssr73674 7 99345487 to 99345519 32 - TSS region transcription start site region 73674
Tssr73675 7 99345995 to 99346009 14 - TSS region transcription start site region 73675
Tssr73676 7 99347136 to 99347166 30 - TSS region transcription start site region 73676
Cpgi19462 7 99348756 to 99349238 482 CpG island CpG island 19462
Tssr68055 7 99348914 to 99348931 17 + TSS region transcription start site region 68055
Tssr73677 7 99348998 to 99349049 51 - TSS region transcription start site region 73677
Tssr73678 7 99349078 to 99349103 25 - TSS region transcription start site region 73678
Tssr73679 7 99349121 to 99349152 31 - TSS region transcription start site region 73679
Tssr73680 7 99349165 to 99349177 12 - TSS region transcription start site region 73680
Tssr73681 7 99350162 to 99350168 6 - TSS region transcription start site region 73681
Cpgi19463 7 99352751 to 99353152 401 CpG island CpG island 19463
Tssr73682 7 99353104 to 99353121 17 - TSS region transcription start site region 73682
Tssr2336 7 99353223 to 99353234 11 - TSS region transcription start site region 2336
Cpgi19464 7 99380986 to 99382411 1425 CpG island CpG island 19464
Gdpd5 7 99381415 to 99460984 79569 + protein coding gene glycerophosphodiester phosphodiesterase domain containing 5
Tssr68056 7 99381495 to 99381555 60 + TSS region transcription start site region 68056
Tssr73683 7 99382297 to 99382313 16 - TSS region transcription start site region 73683
Tssr73684 7 99382320 to 99382340 20 - TSS region transcription start site region 73684
Klhl35 7 99466004 to 99474022 8018 + protein coding gene kelch-like 35
Tssr68057 7 99466021 to 99466032 11 + TSS region transcription start site region 68057
Cpgi19465 7 99467566 to 99467725 159 CpG island CpG island 19465
Cpgi19466 7 99468000 to 99469300 1300 CpG island CpG island 19466
Cpgi19467 7 99471667 to 99472005 338 CpG island CpG island 19467
Rps3 7 99477896 to 99483709 5813 - protein coding gene ribosomal protein S3
Tssr73685 7 99478596 to 99478599 3 - TSS region transcription start site region 73685
Tssr68058 7 99478881 to 99478916 35 + TSS region transcription start site region 68058
Snord15b 7 99479563 to 99479707 144 - snoRNA gene small nucleolar RNA, C/D box 14B
Tssr73686 7 99479702 to 99479707 5 - TSS region transcription start site region 73686
Tssr73687 7 99480008 to 99480029 21 - TSS region transcription start site region 73687
Tssr73688 7 99482323 to 99482334 11 - TSS region transcription start site region 73688
Snord15a 7 99482785 to 99482932 147 - snoRNA gene small nucleolar RNA, C/D box 15A
Tssr73689 7 99482926 to 99482934 8 - TSS region transcription start site region 73689
Cpgi19468 7 99483151 to 99483730 579 CpG island CpG island 19468
Tssr73690 7 99483645 to 99483654 9 - TSS region transcription start site region 73690
n-R5s156 7 99497718 to 99497822 104 + rRNA gene nuclear encoded rRNA 5S 156
Gm39056 7 99500464 to 99505945 5481 + lncRNA gene predicted gene, 39056
D7Dcr42 7 99511327 to 99511446 119 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 42
D7Mit353 7 99511336 to 99511445 109 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 353
Gm40450 7 99511650 to 99517153 5503 + lncRNA gene predicted gene, 40450
Gm34172 7 99516645 to 99529638 12993 - lncRNA gene predicted gene, 34172
Cpgi19469 7 99535026 to 99536478 1452 CpG island CpG island 19469
Tssr68059 7 99535143 to 99535184 41 + TSS region transcription start site region 68059
Tssr68060 7 99535262 to 99535280 18 + TSS region transcription start site region 68060
Tssr68061 7 99535300 to 99535311 11 + TSS region transcription start site region 68061
Tssr68062 7 99535439 to 99535498 59 + TSS region transcription start site region 68062
Arrb1 7 99535486 to 99606772 71286 + protein coding gene arrestin, beta 1
Tssr68063 7 99535512 to 99535591 79 + TSS region transcription start site region 68063
Tssr68064 7 99535652 to 99535740 88 + TSS region transcription start site region 68064
Tssr73691 7 99536040 to 99536053 13 - TSS region transcription start site region 73691
Tssr68065 7 99536456 to 99536458 2 + TSS region transcription start site region 68065
Tssr2337 7 99540427 to 99540434 7 + TSS region transcription start site region 2337
n-TEctc3 7 99543900 to 99543971 71 - tRNA gene nuclear encoded tRNA glutamic acid 3 (anticodon CTC)
Mir326 7 99552269 to 99552363 94 + miRNA gene microRNA 326
Gm44914 7 99568121 to 99570840 2719 - unclassified gene predicted gene 44914
Tssr68066 7 99570544 to 99570588 44 + TSS region transcription start site region 68066
Tssr68067 7 99579575 to 99579604 29 + TSS region transcription start site region 68067
Tssr68068 7 99579627 to 99579644 17 + TSS region transcription start site region 68068
Tssr68069 7 99579694 to 99579709 15 + TSS region transcription start site region 68069
Tssr2338 7 99579755 to 99579764 9 + TSS region transcription start site region 2338