Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:98533995-99144010

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi19447 7 98534426 to 98534592 166 CpG island CpG island 19447
Tssr73636 7 98539130 to 98539137 7 - TSS region transcription start site region 73636
Tssr68024 7 98539394 to 98539404 10 + TSS region transcription start site region 68024
A630091E08Rik 7 98543320 to 98562990 19670 - lincRNA gene RIKEN cDNA A630091E08 gene
Tssr73637 7 98562333 to 98562351 18 - TSS region transcription start site region 73637
Tssr73638 7 98562353 to 98562366 13 - TSS region transcription start site region 73638
Tssr73639 7 98562982 to 98563004 22 - TSS region transcription start site region 73639
Tssr73640 7 98563016 to 98563026 10 - TSS region transcription start site region 73640
Tssr68025 7 98563162 to 98563170 8 + TSS region transcription start site region 68025
Tssr68026 7 98563189 to 98563196 7 + TSS region transcription start site region 68026
Tssr68027 7 98563227 to 98563236 9 + TSS region transcription start site region 68027
Emsy 7 98587137 to 98656783 69646 - protein coding gene EMSY, BRCA2-interacting transcriptional repressor
Cpgi19448 7 98655558 to 98657298 1740 CpG island CpG island 19448
Tssr68028 7 98655817 to 98655853 36 + TSS region transcription start site region 68028
Tssr68029 7 98656145 to 98656159 14 + TSS region transcription start site region 68029
Tssr68030 7 98656174 to 98656201 27 + TSS region transcription start site region 68030
4930558N01Rik 7 98656198 to 98657829 1631 unclassified gene RIKEN cDNA 4930558N01 gene
Tssr73641 7 98656515 to 98656524 9 - TSS region transcription start site region 73641
Tssr73642 7 98656530 to 98656600 70 - TSS region transcription start site region 73642
Tssr73643 7 98656792 to 98656813 21 - TSS region transcription start site region 73643
Tssr68031 7 98656901 to 98656946 45 + TSS region transcription start site region 68031
Tssr73644 7 98665347 to 98665348 1 - TSS region transcription start site region 73644
Gm45132 7 98678106 to 98680647 2541 - unclassified gene predicted gene 45132
Gm15506 7 98682331 to 98693341 11010 - unclassified non-coding RNA gene predicted gene 15506
Tssr73645 7 98694191 to 98694215 24 - TSS region transcription start site region 73645
Tssr73646 7 98694222 to 98694233 11 - TSS region transcription start site region 73646
Cpgi19449 7 98702565 to 98703810 1245 CpG island CpG island 19449
Tssr73647 7 98702849 to 98702874 25 - TSS region transcription start site region 73647
Tssr73648 7 98702882 to 98702893 11 - TSS region transcription start site region 73648
Tssr73649 7 98702899 to 98702934 35 - TSS region transcription start site region 73649
Tssr68032 7 98703091 to 98703137 46 + TSS region transcription start site region 68032
Thap12 7 98703128 to 98718062 14934 + protein coding gene THAP domain containing 12
Tssr68033 7 98703159 to 98703170 11 + TSS region transcription start site region 68033
Tssr68034 7 98703239 to 98703292 53 + TSS region transcription start site region 68034
Tssr68035 7 98703298 to 98703312 14 + TSS region transcription start site region 68035
Gm19656 7 98719498 to 98727090 7592 - lincRNA gene predicted gene, 19656
Cpgi19450 7 98729995 to 98730430 435 CpG island CpG island 19450
Gm44934 7 98734747 to 98735081 334 - lincRNA gene predicted gene 44934
Gm19250 7 98761481 to 98761940 459 + pseudogene predicted gene, 19250
Gm33720 7 98763018 to 98769841 6823 + lncRNA gene predicted gene, 33720
Cpgi19451 7 98814883 to 98815456 573 CpG island CpG island 19451
n-TPtgg8 7 98815415 to 98815486 71 + tRNA gene nuclear encoded tRNA proline 8 (anticodon TGG)
n-TPagg7 7 98815676 to 98815747 71 - tRNA gene nuclear encoded tRNA proline 7 (anticodon AGG)
Cpgi19452 7 98815751 to 98816706 955 CpG island CpG island 19452
Gm39054 7 98816131 to 98821934 5803 + lncRNA gene predicted gene, 39054
Gm33770 7 98830658 to 98836055 5397 - lncRNA gene predicted gene, 33770
Cpgi19453 7 98834517 to 98837134 2617 CpG island CpG island 19453
Wnt11 7 98834916 to 98854747 19831 + protein coding gene wingless-type MMTV integration site family, member 11
Tssr68036 7 98835104 to 98835119 15 + TSS region transcription start site region 68036
Cpgi19454 7 98837964 to 98838366 402 CpG island CpG island 19454
Cpgi19455 7 98838592 to 98839715 1123 CpG island CpG island 19455
Tssr68037 7 98838995 to 98839010 15 + TSS region transcription start site region 68037
Cpgi19456 7 98846299 to 98846744 445 CpG island CpG island 19456
Gm8398 7 98854732 to 98855095 363 - pseudogene predicted gene 8398
Gm33827 7 98869260 to 98876632 7372 - lncRNA gene predicted gene, 33827
Uvrag 7 98886742 to 99141168 254426 - protein coding gene UV radiation resistance associated gene
Cpgi19457 7 98887834 to 98888288 454 CpG island CpG island 19457
Tssr68038 7 98889910 to 98889913 3 + TSS region transcription start site region 68038
Gm8149 7 98895217 to 98906485 11268 + unclassified gene predicted gene 8149
Tssr68039 7 98895928 to 98895933 5 + TSS region transcription start site region 68039
Gm45188 7 98895930 to 98899545 3615 + antisense lncRNA gene predicted gene 45188
Gm45187 7 98904268 to 98908055 3787 + antisense lncRNA gene predicted gene 45187
Gm39055 7 98906590 to 98910998 4408 + lncRNA gene predicted gene, 39055
D7Mit354 7 98911768 to 98911890 122 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 354
Tssr73650 7 98931199 to 98931202 3 - TSS region transcription start site region 73650
Gm23479 7 98935894 to 98936015 121 + snoRNA gene predicted gene, 23479
Tssr73651 7 98943353 to 98943359 6 - TSS region transcription start site region 73651
Tssr73652 7 98975974 to 98975997 23 - TSS region transcription start site region 73652
Tssr73653 7 98993549 to 98993551 2 - TSS region transcription start site region 73653
Tssr73654 7 99020432 to 99020439 7 - TSS region transcription start site region 73654
Tssr73655 7 99049942 to 99049983 41 - TSS region transcription start site region 73655
Gm33882 7 99090232 to 99090882 650 + pseudogene predicted gene, 33882
Tssr73656 7 99116757 to 99116762 5 - TSS region transcription start site region 73656
Gm44975 7 99122070 to 99123459 1389 - unclassified gene predicted gene 44975
Tssr73657 7 99131745 to 99131747 2 - TSS region transcription start site region 73657
Cpgi19458 7 99140493 to 99141733 1240 CpG island CpG island 19458
Tssr73658 7 99141068 to 99141149 81 - TSS region transcription start site region 73658
Tssr73659 7 99141266 to 99141294 28 - TSS region transcription start site region 73659
Gm45185 7 99141593 to 99141996 403 + unclassified gene predicted gene 45185