Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:97321808-97721916

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Usp35 7 97309380 to 97332020 22640 - protein coding gene ubiquitin specific peptidase 35
Cpgi19422 7 97325077 to 97326032 955 CpG island CpG island 19422
Cpgi19423 7 97331747 to 97332769 1022 CpG island CpG island 19423
Tssr73573 7 97332017 to 97332095 78 - TSS region transcription start site region 73573
Tssr73574 7 97332103 to 97332114 11 - TSS region transcription start site region 73574
Tssr73575 7 97332116 to 97332142 26 - TSS region transcription start site region 73575
Tssr67964 7 97332311 to 97332331 20 + TSS region transcription start site region 67964
Kctd21 7 97332327 to 97350213 17886 + protein coding gene potassium channel tetramerisation domain containing 21
Tssr67965 7 97332638 to 97332651 13 + TSS region transcription start site region 67965
Cpgi19425 7 97371391 to 97371926 535 CpG island CpG island 19425
Tssr67966 7 97371592 to 97371601 9 + TSS region transcription start site region 67966
Alg8 7 97371594 to 97392159 20565 + protein coding gene asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase)
Tssr67967 7 97371604 to 97371640 36 + TSS region transcription start site region 67967
Cpgi19426 7 97399862 to 97400635 773 CpG island CpG island 19426
Ndufc2 7 97400003 to 97407800 7797 + protein coding gene NADH:ubiquinone oxidoreductase subunit C2
Tssr67968 7 97400044 to 97400047 3 + TSS region transcription start site region 67968
Tssr67969 7 97400049 to 97400115 66 + TSS region transcription start site region 67969
Tssr67970 7 97400125 to 97400136 11 + TSS region transcription start site region 67970
Tssr67971 7 97400168 to 97400178 10 + TSS region transcription start site region 67971
Gm16053 7 97406140 to 97406327 187 + pseudogene predicted gene 16053
Thrsp 7 97412933 to 97417550 4617 - protein coding gene thyroid hormone responsive
Tssr73576 7 97413417 to 97413435 18 - TSS region transcription start site region 73576
Tssr73577 7 97413596 to 97413601 5 - TSS region transcription start site region 73577
Cpgi19427 7 97417094 to 97417548 454 CpG island CpG island 19427
Tssr2334 7 97417461 to 97417469 8 - TSS region transcription start site region 2334
Tssr73578 7 97417511 to 97417539 28 - TSS region transcription start site region 73578
Gm32945 7 97418653 to 97420144 1491 + lncRNA gene predicted gene, 32945
Tssr73579 7 97420957 to 97420980 23 - TSS region transcription start site region 73579
Tssr67972 7 97451267 to 97451270 3 + TSS region transcription start site region 67972
Tssr67973 7 97451300 to 97451309 9 + TSS region transcription start site region 67973
Tssr67974 7 97451316 to 97451331 15 + TSS region transcription start site region 67974
Kctd14 7 97451323 to 97459557 8234 + protein coding gene potassium channel tetramerisation domain containing 14
Tssr67975 7 97451432 to 97451441 9 + TSS region transcription start site region 67975
Tssr67976 7 97453235 to 97453303 68 + TSS region transcription start site region 67976
Cpgi19428 7 97453342 to 97453588 246 CpG island CpG island 19428
7030407A21Rik 7 97455265 to 97456712 1447 unclassified gene RIKEN cDNA 7030407A21 gene
Cpgi19429 7 97457877 to 97458076 199 CpG island CpG island 19429
Tssr67977 7 97480906 to 97480917 11 + TSS region transcription start site region 67977
Tssr67978 7 97480920 to 97480927 7 + TSS region transcription start site region 67978
Tssr67979 7 97480928 to 97480966 38 + TSS region transcription start site region 67979
Cpgi19430 7 97480935 to 97481319 384 CpG island CpG island 19430
Ints4 7 97480956 to 97541395 60439 + protein coding gene integrator complex subunit 4
Tssr67980 7 97480994 to 97481078 84 + TSS region transcription start site region 67980
Tssr67981 7 97494067 to 97494072 5 + TSS region transcription start site region 67981
Gm24412 7 97521808 to 97521916 108 + snoRNA gene predicted gene, 24412
Tssr67982 7 97536214 to 97536227 13 + TSS region transcription start site region 67982
Tssr73580 7 97549777 to 97549790 13 - TSS region transcription start site region 73580
Aamdc 7 97550331 to 97579497 29166 - protein coding gene adipogenesis associated Mth938 domain containing
Tssr73581 7 97578764 to 97578767 3 - TSS region transcription start site region 73581
Cpgi19431 7 97579169 to 97580645 1476 CpG island CpG island 19431
Tssr73582 7 97579428 to 97579501 73 - TSS region transcription start site region 73582
Tssr67983 7 97579560 to 97579609 49 + TSS region transcription start site region 67983
Tssr67984 7 97579868 to 97579901 33 + TSS region transcription start site region 67984
Rsf1 7 97579889 to 97692778 112889 + protein coding gene remodeling and spacing factor 1
Cpgi19432 7 97580989 to 97581278 289 CpG island CpG island 19432
Tssr67985 7 97590214 to 97590218 4 + TSS region transcription start site region 67985
Ywhaq-ps1 7 97591693 to 97592402 709 - pseudogene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, pseudogene 1
Rpl15-ps5 7 97594837 to 97595441 604 - pseudogene ribosomal protein L15, pseudogene 5
Rsf1os1 7 97598349 to 97645112 46763 - antisense lncRNA gene remodeling and spacing factor 1, opposite strand 1
Tssr67986 7 97637688 to 97637691 3 + TSS region transcription start site region 67986
Tssr73583 7 97645120 to 97645135 15 - TSS region transcription start site region 73583
C920008N22Rik 7 97649002 to 97652316 3314 unclassified gene RIKEN cDNA C920008N22 gene
Gm45186 7 97654276 to 97654753 477 - pseudogene predicted gene 45186
Rsf1os2 7 97681850 to 97696640 14790 - antisense lncRNA gene remodeling and spacing factor 1, opposite strand 2
Cpgi19433 7 97696063 to 97697336 1273 CpG island CpG island 19433
Tssr67987 7 97696645 to 97696725 80 + TSS region transcription start site region 67987
Clns1a 7 97696657 to 97720793 24136 + protein coding gene chloride channel, nucleotide-sensitive, 1A
Tssr73584 7 97721515 to 97721518 3 - TSS region transcription start site region 73584