Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:95454424-97044532

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Albc2 7 88000000 to 96000000 8000000 QTL albino coat color QTL 2
Gm8309 7 95461991 to 95463438 1447 + pseudogene predicted gene 8309
Gm44603 7 95474946 to 95475312 366 + pseudogene predicted gene 44603
Tssr73564 7 95596120 to 95596145 25 - TSS region transcription start site region 73564
Gm39049 7 95775449 to 95781171 5722 + lncRNA gene predicted gene, 39049
Gm5037 7 95912769 to 95913386 617 - pseudogene predicted gene 5037
Cpgi19413 7 95913131 to 95913371 240 CpG island CpG island 19413
D7Mit373 7 96071819 to 96072018 199 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology-373
Tenm4 7 96171246 to 96911093 739847 + protein coding gene teneurin transmembrane protein 4
Gm8319 7 96202896 to 96203536 640 - pseudogene predicted gene 8319
Cpgi19414 7 96209690 to 96211330 1640 CpG island CpG island 19414
Tssr67889 7 96209939 to 96209975 36 + TSS region transcription start site region 67889
Tssr67890 7 96210107 to 96210183 76 + TSS region transcription start site region 67890
Tssr67891 7 96210184 to 96210200 16 + TSS region transcription start site region 67891
Tssr2332 7 96210250 to 96210259 9 + TSS region transcription start site region 2332
Tssr67892 7 96210277 to 96210288 11 + TSS region transcription start site region 67892
Cpgi19415 7 96211516 to 96211947 431 CpG island CpG island 19415
Tssr67893 7 96211656 to 96211680 24 + TSS region transcription start site region 67893
Tssr67894 7 96211825 to 96211837 12 + TSS region transcription start site region 67894
Tssr67895 7 96211895 to 96211921 26 + TSS region transcription start site region 67895
Tssr67896 7 96211927 to 96211938 11 + TSS region transcription start site region 67896
Cpgi19416 7 96212615 to 96213519 904 CpG island CpG island 19416
Tssr67897 7 96213392 to 96213401 9 + TSS region transcription start site region 67897
Mir708 7 96249424 to 96249532 108 + miRNA gene microRNA 708
Tssr67898 7 96279192 to 96279195 3 + TSS region transcription start site region 67898
Tssr67899 7 96295942 to 96295947 5 + TSS region transcription start site region 67899
Mir6394 7 96305667 to 96305765 98 + miRNA gene microRNA 6394
Gm15412 7 96339483 to 96341964 2481 - antisense lncRNA gene predicted gene 15412
Tssr67900 7 96406811 to 96406827 16 + TSS region transcription start site region 67900
Rps11-ps5 7 96435546 to 96436017 471 - pseudogene ribosomal protein S11, pseudogene 5
Tssr67901 7 96456311 to 96456325 14 + TSS region transcription start site region 67901
Cpgi19417 7 96494133 to 96494348 215 CpG island CpG island 19417
Tssr67902 7 96512615 to 96512629 14 + TSS region transcription start site region 67902
Tssr67903 7 96522342 to 96522357 15 + TSS region transcription start site region 67903
Tssr67904 7 96532700 to 96532707 7 + TSS region transcription start site region 67904
Tssr67905 7 96532718 to 96532739 21 + TSS region transcription start site region 67905
Cpgi19418 7 96549973 to 96550344 371 CpG island CpG island 19418
8030425K09Rik 7 96585811 to 96586907 1096 unclassified gene RIKEN cDNA 8030425K09 gene
Tssr67906 7 96593361 to 96593377 16 + TSS region transcription start site region 67906
Gm15414 7 96596652 to 96629069 32417 - antisense lncRNA gene predicted gene 15414
Tssr67907 7 96603474 to 96603513 39 + TSS region transcription start site region 67907
Tssr67908 7 96619094 to 96619099 5 + TSS region transcription start site region 67908
Tssr67909 7 96644113 to 96644135 22 + TSS region transcription start site region 67909
Tssr67910 7 96644138 to 96644178 40 + TSS region transcription start site region 67910
Tssr67911 7 96647637 to 96647686 49 + TSS region transcription start site region 67911
Tssr67912 7 96648090 to 96648111 21 + TSS region transcription start site region 67912
Tssr67913 7 96672678 to 96672681 3 + TSS region transcription start site region 67913
Tssr67914 7 96694804 to 96694816 12 + TSS region transcription start site region 67914
Tssr67915 7 96697478 to 96697491 13 + TSS region transcription start site region 67915
Tssr67916 7 96754802 to 96754806 4 + TSS region transcription start site region 67916
Gm15413 7 96791433 to 96801549 10116 - antisense lncRNA gene predicted gene 15413
Cpgi19419 7 96797275 to 96797556 281 CpG island CpG island 19419
Tssr67917 7 96797293 to 96797341 48 + TSS region transcription start site region 67917
Gm15416 7 96812433 to 96817485 5052 - antisense lncRNA gene predicted gene 15416
Gm44633 7 96813869 to 96818306 4437 - antisense lncRNA gene predicted gene 44633
Tssr67918 7 96825527 to 96825532 5 + TSS region transcription start site region 67918
D7Mit184 7 96843943 to 96844092 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 184
Gm25712 7 96863287 to 96863379 92 - rRNA gene predicted gene, 25712
D7Mit351 7 96901062 to 96901168 106 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 351
C230038L03Rik 7 96907622 to 96951521 43899 - lncRNA gene RIKEN cDNA C230038L03 gene
Gm22226 7 96919994 to 96920102 108 - snRNA gene predicted gene, 22226
Tssr67919 7 96946874 to 96946902 28 + TSS region transcription start site region 67919
Tssr73565 7 96947033 to 96947042 9 - TSS region transcription start site region 73565
Cpgi19420 7 96951288 to 96952067 779 CpG island CpG island 19420
Nars2 7 96951510 to 97064758 113248 + protein coding gene asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
Tssr67920 7 96951515 to 96951526 11 + TSS region transcription start site region 67920
Tssr67921 7 96951534 to 96951548 14 + TSS region transcription start site region 67921
Tssr67922 7 96951552 to 96951597 45 + TSS region transcription start site region 67922
Tssr73566 7 96951842 to 96951881 39 - TSS region transcription start site region 73566
Tssr67923 7 96958120 to 96958148 28 + TSS region transcription start site region 67923
Tssr2333 7 97032827 to 97032831 4 + TSS region transcription start site region 2333