Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:92424892-93214915

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98 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rigs1 7 36580590 to 92745138 56164548 QTL radiation induced gastroschisis 1
Powg 7 73207357 to 92932955 19725598 QTL post-ovarectomy weight gain
Png1 7 74676373 to 92745138 18068765 QTL Postnatal growth 1
Dlg2 7 90476672 to 92449247 1972575 + protein coding gene discs large MAGUK scaffold protein 2
Gm45201 7 92431170 to 92433848 2678 + unclassified gene predicted gene 45201
Tssr67845 7 92447280 to 92447285 5 + TSS region transcription start site region 67845
Tssr67846 7 92447379 to 92447391 12 + TSS region transcription start site region 67846
Tssr67847 7 92447431 to 92447442 11 + TSS region transcription start site region 67847
Tssr67848 7 92447467 to 92447478 11 + TSS region transcription start site region 67848
Tssr67849 7 92447508 to 92447525 17 + TSS region transcription start site region 67849
Tssr67850 7 92447561 to 92447570 9 + TSS region transcription start site region 67850
Tssr67851 7 92447573 to 92447589 16 + TSS region transcription start site region 67851
Tssr67852 7 92447607 to 92447608 1 + TSS region transcription start site region 67852
Tssr67853 7 92447612 to 92447633 21 + TSS region transcription start site region 67853
Tssr67854 7 92447635 to 92447646 11 + TSS region transcription start site region 67854
Tssr67855 7 92447650 to 92447657 7 + TSS region transcription start site region 67855
Tssr67856 7 92447718 to 92447731 13 + TSS region transcription start site region 67856
Tssr67857 7 92448962 to 92448966 4 + TSS region transcription start site region 67857
Gm31491 7 92469227 to 92478235 9008 + pseudogene predicted gene, 31491
Cpgi19407 7 92561046 to 92561882 836 CpG island CpG island 19407
Tssr67858 7 92561141 to 92561210 69 + TSS region transcription start site region 67858
Ccdc90b 7 92561149 to 92582294 21145 + protein coding gene coiled-coil domain containing 90B
Tssr67859 7 92561484 to 92561537 53 + TSS region transcription start site region 67859
Tssr67860 7 92561542 to 92561553 11 + TSS region transcription start site region 67860
Ankrd42 7 92584175 to 92637142 52967 - protein coding gene ankyrin repeat domain 42
Tssr73544 7 92618974 to 92618978 4 - TSS region transcription start site region 73544
Cpgi19408 7 92636112 to 92637528 1416 CpG island CpG island 19408
Tssr73545 7 92637079 to 92637147 68 - TSS region transcription start site region 73545
Tssr67861 7 92637169 to 92637221 52 + TSS region transcription start site region 67861
Gm37008 7 92637208 to 92637526 318 + unclassified gene predicted gene, 37008
Tssr67862 7 92637225 to 92637235 10 + TSS region transcription start site region 67862
Tssr67863 7 92638299 to 92638302 3 + TSS region transcription start site region 67863
Gm26944 7 92639739 to 92647442 7703 + antisense lncRNA gene predicted gene, 26944
6430511E19Rik 7 92639949 to 92643783 3834 + unclassified gene RIKEN cDNA 6430511E19 gene
Pcf11 7 92643710 to 92670051 26341 - protein coding gene PCF11 cleavage and polyadenylation factor subunit
Tssr73546 7 92654016 to 92654020 4 - TSS region transcription start site region 73546
Tssr73547 7 92661665 to 92661715 50 - TSS region transcription start site region 73547
Tssr73548 7 92666055 to 92666060 5 - TSS region transcription start site region 73548
Tssr73549 7 92667957 to 92667966 9 - TSS region transcription start site region 73549
Cpgi19409 7 92668949 to 92670526 1577 CpG island CpG island 19409
Tssr73550 7 92669865 to 92669877 12 - TSS region transcription start site region 73550
Tssr73551 7 92669888 to 92669912 24 - TSS region transcription start site region 73551
Tssr73552 7 92669917 to 92669943 26 - TSS region transcription start site region 73552
Tssr73553 7 92670068 to 92670092 24 - TSS region transcription start site region 73553
Gm2551 7 92693676 to 92697905 4229 - pseudogene predicted gene 2551
Tssr67864 7 92698911 to 92698922 11 + TSS region transcription start site region 67864
Tssr67865 7 92705248 to 92705261 13 + TSS region transcription start site region 67865
Gm45199 7 92706773 to 92708279 1506 + unclassified gene predicted gene 45199
Gm26981 7 92729840 to 92733748 3908 + lincRNA gene predicted gene, 26981
4632427E13Rik 7 92740706 to 92741459 753 - bidirectional promoter lncRNA gene RIKEN cDNA 4632427E13 gene
Cpgi19410 7 92741058 to 92741794 736 CpG island CpG island 19410
Tssr73554 7 92741403 to 92741410 7 - TSS region transcription start site region 73554
Tssr73555 7 92741417 to 92741444 27 - TSS region transcription start site region 73555
Tssr73556 7 92741448 to 92741473 25 - TSS region transcription start site region 73556
Tssr67866 7 92741632 to 92741715 83 + TSS region transcription start site region 67866
Rab30 7 92741714 to 92844535 102821 + protein coding gene RAB30, member RAS oncogene family
Adip3 7 92745007 to 92745138 131 QTL adiposity 3
D7Mit148 7 92745007 to 92745138 131 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 148
D7Dcr39 7 92745049 to 92745157 108 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 39
D7Jpk2 7 92747007 to 92747155 148 DNA segment DNA segment, Chr 7, Japan, Kominami 2
Tssr67867 7 92761355 to 92761385 30 + TSS region transcription start site region 67867
Tssr67868 7 92777564 to 92777604 40 + TSS region transcription start site region 67868
Gm45200 7 92778505 to 92779423 918 + unclassified gene predicted gene 45200
Tssr67869 7 92819892 to 92819915 23 + TSS region transcription start site region 67869
2010107C10Rik 7 92820557 to 92820767 210 unclassified gene RIKEN cDNA 2010107C10 gene
Tssr67870 7 92839871 to 92839878 7 + TSS region transcription start site region 67870
Ddias 7 92857525 to 92874247 16722 - protein coding gene DNA damage-induced apoptosis suppressor
Cpgi19411 7 92873977 to 92875449 1472 CpG island CpG island 19411
Tssr73557 7 92874154 to 92874165 11 - TSS region transcription start site region 73557
Tssr73558 7 92874196 to 92874244 48 - TSS region transcription start site region 73558
Tssr73559 7 92875092 to 92875133 41 - TSS region transcription start site region 73559
Prcp 7 92875253 to 92934581 59328 + protein coding gene prolylcarboxypeptidase (angiotensinase C)
Tssr67871 7 92875266 to 92875284 18 + TSS region transcription start site region 67871
Tssr67872 7 92875289 to 92875315 26 + TSS region transcription start site region 67872
Tssr73560 7 92876496 to 92876502 6 - TSS region transcription start site region 73560
Gm40448 7 92877428 to 92889994 12566 + lncRNA gene predicted gene, 40448
Tssr73561 7 92878754 to 92878761 7 - TSS region transcription start site region 73561
9530078K11Rik 7 92902179 to 92902872 693 + unclassified gene RIKEN cDNA 9530078K11 gene
Tssr67873 7 92928708 to 92928724 16 + TSS region transcription start site region 67873
Tssr67874 7 92933030 to 92933042 12 + TSS region transcription start site region 67874
Tssr67875 7 92933067 to 92933096 29 + TSS region transcription start site region 67875
Tssr67876 7 92933147 to 92933161 14 + TSS region transcription start site region 67876
Tssr67877 7 92934314 to 92934325 11 + TSS region transcription start site region 67877
Tssr67878 7 92934910 to 92934928 18 + TSS region transcription start site region 67878
Gm31663 7 92979876 to 93006513 26637 + pseudogene predicted gene, 31663
Tssr67879 7 92982086 to 92982120 34 + TSS region transcription start site region 67879
Gm26862 7 93006982 to 93104789 97807 + sense overlapping lncRNA gene predicted gene, 26862
Gm9934 7 93052081 to 93081027 28946 - antisense lncRNA gene predicted gene 9934
Cpgi19412 7 93079600 to 93081246 1646 CpG island CpG island 19412
Tssr67880 7 93079859 to 93079870 11 + TSS region transcription start site region 67880
Fam181b 7 93079879 to 93081722 1843 + protein coding gene family with sequence similarity 181, member B
Tssr67881 7 93079883 to 93079901 18 + TSS region transcription start site region 67881
Tssr67882 7 93079912 to 93079931 19 + TSS region transcription start site region 67882
Tssr67883 7 93079940 to 93079955 15 + TSS region transcription start site region 67883
Gm25860 7 93147846 to 93147971 125 - snoRNA gene predicted gene, 25860
Gm44715 7 93168834 to 93172672 3838 + pseudogene predicted gene 44715
Gm15501 7 93178980 to 93179684 704 - pseudogene predicted pseudogene 15501
Tssr73562 7 93179669 to 93179678 9 - TSS region transcription start site region 73562