Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:90632149-92702293

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158 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dlg2 7 90476672 to 92449247 1972575 + protein coding gene discs large MAGUK scaffold protein 2
D7Mit300 7 90804882 to 90805006 124 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 300
Gm45162 7 90811544 to 90812161 617 - pseudogene predicted gene 45162
A930002H02Rik 7 90871603 to 90872780 1177 + unclassified gene RIKEN cDNA A930002H02 gene
Gm45161 7 90885444 to 90887706 2262 - unclassified gene predicted gene 45161
Gm45159 7 90887072 to 90940052 52980 + lincRNA gene predicted gene 45159
Tssr67771 7 90887282 to 90887312 30 + TSS region transcription start site region 67771
Tssr67772 7 90887338 to 90887359 21 + TSS region transcription start site region 67772
Tssr67773 7 90887365 to 90887386 21 + TSS region transcription start site region 67773
Tssr67774 7 90887596 to 90887607 11 + TSS region transcription start site region 67774
Tssr67775 7 90954724 to 90954751 27 + TSS region transcription start site region 67775
Tssr67776 7 90965786 to 90965799 13 + TSS region transcription start site region 67776
Tssr67777 7 90972386 to 90972403 17 + TSS region transcription start site region 67777
Tssr67778 7 90972427 to 90972442 15 + TSS region transcription start site region 67778
Gm45178 7 90995309 to 90999418 4109 + unclassified gene predicted gene 45178
Gm39048 7 91015739 to 91016298 559 + lncRNA gene predicted gene, 39048
Gm45179 7 91048999 to 91053335 4336 + unclassified gene predicted gene 45179
Stmm2b 7 91076757 to 91076757 0 QTL skin tumor modifier of MSM 2a
Tssr67779 7 91090697 to 91090727 30 + TSS region transcription start site region 67779
Tssr67780 7 91090728 to 91090751 23 + TSS region transcription start site region 67780
Tssr67781 7 91090810 to 91090847 37 + TSS region transcription start site region 67781
Tssr67782 7 91090873 to 91090887 14 + TSS region transcription start site region 67782
Tssr67783 7 91090888 to 91090902 14 + TSS region transcription start site region 67783
Tssr67784 7 91090912 to 91090927 15 + TSS region transcription start site region 67784
Tssr67785 7 91090932 to 91090951 19 + TSS region transcription start site region 67785
Tssr67786 7 91108795 to 91108805 10 + TSS region transcription start site region 67786
Tssr67787 7 91108817 to 91108829 12 + TSS region transcription start site region 67787
Tssr67788 7 91118309 to 91118314 5 + TSS region transcription start site region 67788
Gm27470 7 91123002 to 91123211 209 - unclassified non-coding RNA gene predicted gene, 27470
Gm27660 7 91126348 to 91126555 207 - unclassified non-coding RNA gene predicted gene, 27660
Gm45176 7 91131841 to 91135936 4095 + unclassified gene predicted gene 45176
Tssr67789 7 91138297 to 91138310 13 + TSS region transcription start site region 67789
Gm45177 7 91139964 to 91142270 2306 + unclassified gene predicted gene 45177
Tssr67790 7 91143676 to 91143681 5 + TSS region transcription start site region 67790
Tssr67791 7 91156852 to 91156855 3 + TSS region transcription start site region 67791
Gm45182 7 91158600 to 91161003 2403 + unclassified gene predicted gene 45182
Tssr67792 7 91162533 to 91162544 11 + TSS region transcription start site region 67792
Tssr67793 7 91162659 to 91162690 31 + TSS region transcription start site region 67793
Tssr67794 7 91176779 to 91176788 9 + TSS region transcription start site region 67794
Tssr67795 7 91176911 to 91176928 17 + TSS region transcription start site region 67795
Tssr67796 7 91226518 to 91226522 4 + TSS region transcription start site region 67796
Gm24552 7 91242995 to 91243097 102 + snRNA gene predicted gene, 24552
Tssr67797 7 91250748 to 91250768 20 + TSS region transcription start site region 67797
Tssr67798 7 91253275 to 91253285 10 + TSS region transcription start site region 67798
Cpgi19403 7 91262094 to 91262352 258 CpG island CpG island 19403
Tssr67799 7 91262121 to 91262144 23 + TSS region transcription start site region 67799
Tssr67800 7 91262309 to 91262338 29 + TSS region transcription start site region 67800
Tssr67801 7 91262340 to 91262358 18 + TSS region transcription start site region 67801
Tssr67802 7 91262365 to 91262374 9 + TSS region transcription start site region 67802
Cpgi19404 7 91262625 to 91262849 224 CpG island CpG island 19404
Tssr67803 7 91262692 to 91262722 30 + TSS region transcription start site region 67803
Tssr67804 7 91262723 to 91262735 12 + TSS region transcription start site region 67804
Tssr67805 7 91267369 to 91267373 4 + TSS region transcription start site region 67805
Tssr67806 7 91269310 to 91269314 4 + TSS region transcription start site region 67806
Gm45183 7 91304695 to 91306191 1496 + unclassified gene predicted gene 45183
Gm44678 7 91340016 to 91342790 2774 + unclassified gene predicted gene 44678
Tssr67807 7 91344510 to 91344515 5 + TSS region transcription start site region 67807
Tssr67808 7 91354220 to 91354225 5 + TSS region transcription start site region 67808
Gm22080 7 91392584 to 91392689 105 - snRNA gene predicted gene, 22080
Tssr67809 7 91463867 to 91463894 27 + TSS region transcription start site region 67809
Tssr67810 7 91488692 to 91488694 2 + TSS region transcription start site region 67810
Tssr67811 7 91508644 to 91508648 4 + TSS region transcription start site region 67811
Tssr67812 7 91509144 to 91509149 5 + TSS region transcription start site region 67812
Gm44679 7 91519115 to 91522022 2907 + unclassified gene predicted gene 44679
Cpgi19405 7 91542581 to 91543255 674 CpG island CpG island 19405
Tssr67813 7 91542965 to 91542993 28 + TSS region transcription start site region 67813
Tssr67814 7 91542994 to 91543043 49 + TSS region transcription start site region 67814
Tssr67815 7 91543064 to 91543095 31 + TSS region transcription start site region 67815
Tssr67816 7 91563079 to 91563086 7 + TSS region transcription start site region 67816
Gm44675 7 91564367 to 91567293 2926 + unclassified gene predicted gene 44675
Tssr67817 7 91564671 to 91564680 9 + TSS region transcription start site region 67817
D7Dcr38 7 91583902 to 91584030 128 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 38
D7Mit301 7 91583911 to 91584031 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 301
Gm44676 7 91608956 to 91612010 3054 + unclassified gene predicted gene 44676
Tssr67818 7 91608982 to 91608986 4 + TSS region transcription start site region 67818
Gm44677 7 91627272 to 91631010 3738 + unclassified gene predicted gene 44677
Gm44680 7 91635239 to 91638148 2909 + unclassified gene predicted gene 44680
Gm44681 7 91647711 to 91648552 841 + unclassified gene predicted gene 44681
Tssr67819 7 91647713 to 91647715 2 + TSS region transcription start site region 67819
Gm23928 7 91667149 to 91667293 144 - snRNA gene predicted gene, 23928
Tssr67820 7 91672381 to 91672390 9 + TSS region transcription start site region 67820
Tssr67821 7 91672430 to 91672448 18 + TSS region transcription start site region 67821
Tssr67822 7 91672455 to 91672483 28 + TSS region transcription start site region 67822
Tssr67823 7 91672486 to 91672497 11 + TSS region transcription start site region 67823
Tssr67824 7 91672637 to 91672657 20 + TSS region transcription start site region 67824
C030038I04Rik 7 91689469 to 91690208 739 + unclassified gene RIKEN cDNA C030038I04 gene
Tssr67825 7 91711663 to 91711687 24 + TSS region transcription start site region 67825
Tssr67826 7 91754607 to 91754623 16 + TSS region transcription start site region 67826
Gm45130 7 91816167 to 91819554 3387 + unclassified gene predicted gene 45130
Gm45129 7 91908063 to 91910286 2223 + unclassified gene predicted gene 45129
Gm32353 7 91932765 to 91960762 27997 - lncRNA gene predicted gene, 32353
Tssr67827 7 92062392 to 92062425 33 + TSS region transcription start site region 67827
Gm45131 7 92064593 to 92067174 2581 + unclassified gene predicted gene 45131
4931412I15Rik 7 92081089 to 92082536 1447 - unclassified gene RIKEN cDNA 4931412I15 gene
4930567K12Rik 7 92092206 to 92119511 27305 - antisense lncRNA gene RIKEN cDNA 4930567K12 gene
Tssr67828 7 92129708 to 92129712 4 + TSS region transcription start site region 67828
Tssr67829 7 92143084 to 92143092 8 + TSS region transcription start site region 67829
Cpgi19406 7 92180538 to 92180992 454 CpG island CpG island 19406
Tssr67830 7 92180610 to 92180621 11 + TSS region transcription start site region 67830
Tssr67831 7 92180678 to 92180734 56 + TSS region transcription start site region 67831
Tssr67832 7 92180874 to 92180896 22 + TSS region transcription start site region 67832
Tssr67833 7 92234940 to 92234970 30 + TSS region transcription start site region 67833
Tssr67834 7 92234974 to 92234997 23 + TSS region transcription start site region 67834
Tssr67835 7 92235079 to 92235123 44 + TSS region transcription start site region 67835
Tssr67836 7 92235135 to 92235144 9 + TSS region transcription start site region 67836
Tssr67837 7 92236168 to 92236173 5 + TSS region transcription start site region 67837
Tssr73542 7 92258674 to 92258688 14 - TSS region transcription start site region 73542
Tssr73543 7 92258692 to 92258701 9 - TSS region transcription start site region 73543
Tssr67838 7 92258823 to 92258832 9 + TSS region transcription start site region 67838
Tssr67839 7 92324659 to 92324663 4 + TSS region transcription start site region 67839
Tssr67840 7 92336590 to 92336628 38 + TSS region transcription start site region 67840
Tssr67841 7 92348216 to 92348246 30 + TSS region transcription start site region 67841
Tssr67842 7 92393409 to 92393413 4 + TSS region transcription start site region 67842
Tssr67843 7 92402698 to 92402706 8 + TSS region transcription start site region 67843
B230206I08Rik 7 92408184 to 92411374 3190 + unclassified gene RIKEN cDNA B230206I08 gene
Tssr67844 7 92420787 to 92420791 4 + TSS region transcription start site region 67844
Gm45201 7 92431170 to 92433848 2678 + unclassified gene predicted gene 45201
Tssr67845 7 92447280 to 92447285 5 + TSS region transcription start site region 67845
Tssr67846 7 92447379 to 92447391 12 + TSS region transcription start site region 67846
Tssr67847 7 92447431 to 92447442 11 + TSS region transcription start site region 67847
Tssr67848 7 92447467 to 92447478 11 + TSS region transcription start site region 67848
Tssr67849 7 92447508 to 92447525 17 + TSS region transcription start site region 67849
Tssr67850 7 92447561 to 92447570 9 + TSS region transcription start site region 67850
Tssr67851 7 92447573 to 92447589 16 + TSS region transcription start site region 67851
Tssr67852 7 92447607 to 92447608 1 + TSS region transcription start site region 67852
Tssr67853 7 92447612 to 92447633 21 + TSS region transcription start site region 67853
Tssr67854 7 92447635 to 92447646 11 + TSS region transcription start site region 67854
Tssr67855 7 92447650 to 92447657 7 + TSS region transcription start site region 67855
Tssr67856 7 92447718 to 92447731 13 + TSS region transcription start site region 67856
Tssr67857 7 92448962 to 92448966 4 + TSS region transcription start site region 67857
Gm31491 7 92469227 to 92478235 9008 + pseudogene predicted gene, 31491
Cpgi19407 7 92561046 to 92561882 836 CpG island CpG island 19407
Tssr67858 7 92561141 to 92561210 69 + TSS region transcription start site region 67858
Ccdc90b 7 92561149 to 92582294 21145 + protein coding gene coiled-coil domain containing 90B
Tssr67859 7 92561484 to 92561537 53 + TSS region transcription start site region 67859
Tssr67860 7 92561542 to 92561553 11 + TSS region transcription start site region 67860
Ankrd42 7 92584175 to 92637142 52967 - protein coding gene ankyrin repeat domain 42
Tssr73544 7 92618974 to 92618978 4 - TSS region transcription start site region 73544
Cpgi19408 7 92636112 to 92637528 1416 CpG island CpG island 19408
Tssr73545 7 92637079 to 92637147 68 - TSS region transcription start site region 73545
Tssr67861 7 92637169 to 92637221 52 + TSS region transcription start site region 67861
Gm37008 7 92637208 to 92637526 318 + unclassified gene predicted gene, 37008
Tssr67862 7 92637225 to 92637235 10 + TSS region transcription start site region 67862
Tssr67863 7 92638299 to 92638302 3 + TSS region transcription start site region 67863
Gm26944 7 92639739 to 92647442 7703 + antisense lncRNA gene predicted gene, 26944
6430511E19Rik 7 92639949 to 92643783 3834 + unclassified gene RIKEN cDNA 6430511E19 gene
Pcf11 7 92643710 to 92670051 26341 - protein coding gene PCF11 cleavage and polyadenylation factor subunit
Tssr73546 7 92654016 to 92654020 4 - TSS region transcription start site region 73546
Tssr73547 7 92661665 to 92661715 50 - TSS region transcription start site region 73547
Tssr73548 7 92666055 to 92666060 5 - TSS region transcription start site region 73548
Tssr73549 7 92667957 to 92667966 9 - TSS region transcription start site region 73549
Cpgi19409 7 92668949 to 92670526 1577 CpG island CpG island 19409
Tssr73550 7 92669865 to 92669877 12 - TSS region transcription start site region 73550
Tssr73551 7 92669888 to 92669912 24 - TSS region transcription start site region 73551
Tssr73552 7 92669917 to 92669943 26 - TSS region transcription start site region 73552
Tssr73553 7 92670068 to 92670092 24 - TSS region transcription start site region 73553
Gm2551 7 92693676 to 92697905 4229 - pseudogene predicted gene 2551
Tssr67864 7 92698911 to 92698922 11 + TSS region transcription start site region 67864