Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:90305444-91467706

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sytl2 7 90302252 to 90410719 108467 + protein coding gene synaptotagmin-like 2
Tssr73536 7 90353893 to 90353931 38 - TSS region transcription start site region 73536
D7Cwr11D 7 90355058 to 90355287 229 DNA segment DNA segment, Chr 7, Case Western Reserve-11D
Tssr67757 7 90386975 to 90387018 43 + TSS region transcription start site region 67757
Tssr67758 7 90387041 to 90387052 11 + TSS region transcription start site region 67758
Tssr67759 7 90426494 to 90426502 8 + TSS region transcription start site region 67759
Tssr67760 7 90426508 to 90426544 36 + TSS region transcription start site region 67760
Tssr67761 7 90426555 to 90426577 22 + TSS region transcription start site region 67761
Ccdc89 7 90426577 to 90428669 2092 + protein coding gene coiled-coil domain containing 89
Cpgi19399 7 90442585 to 90444360 1775 CpG island CpG island 19399
Tssr73537 7 90442624 to 90442650 26 - TSS region transcription start site region 73537
Crebzf 7 90442729 to 90447994 5265 + protein coding gene CREB/ATF bZIP transcription factor
Tssr67762 7 90442774 to 90442865 91 + TSS region transcription start site region 67762
Tssr67763 7 90442902 to 90442921 19 + TSS region transcription start site region 67763
Tmem126a 7 90450712 to 90457208 6496 - protein coding gene transmembrane protein 126A
Tssr67764 7 90451133 to 90451137 4 + TSS region transcription start site region 67764
Cpgi19400 7 90456931 to 90457570 639 CpG island CpG island 19400
Tssr73538 7 90457142 to 90457153 11 - TSS region transcription start site region 73538
Tssr73539 7 90457167 to 90457213 46 - TSS region transcription start site region 73539
Gm44907 7 90457252 to 90458884 1632 + unclassified gene predicted gene 44907
Tssr67765 7 90457274 to 90457285 11 + TSS region transcription start site region 67765
Cpgi19401 7 90460979 to 90461199 220 CpG island CpG island 19401
Tmem126b 7 90468833 to 90475995 7162 - protein coding gene transmembrane protein 126B
Cpgi19402 7 90475713 to 90476703 990 CpG island CpG island 19402
Tssr73540 7 90475971 to 90476003 32 - TSS region transcription start site region 73540
Tssr67766 7 90476660 to 90476681 21 + TSS region transcription start site region 67766
Dlg2 7 90476672 to 92449247 1972575 + protein coding gene discs large MAGUK scaffold protein 2
Tssr67767 7 90476683 to 90476712 29 + TSS region transcription start site region 67767
Tssr67768 7 90519537 to 90519541 4 + TSS region transcription start site region 67768
Tssr67769 7 90540264 to 90540271 7 + TSS region transcription start site region 67769
Tssr73541 7 90541237 to 90541240 3 - TSS region transcription start site region 73541
D7Mit352 7 90599957 to 90600077 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 352
Tssr67770 7 90615078 to 90615092 14 + TSS region transcription start site region 67770
D7Mit300 7 90804882 to 90805006 124 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 300
Gm45162 7 90811544 to 90812161 617 - pseudogene predicted gene 45162
A930002H02Rik 7 90871603 to 90872780 1177 + unclassified gene RIKEN cDNA A930002H02 gene
Gm45161 7 90885444 to 90887706 2262 - unclassified gene predicted gene 45161
Gm45159 7 90887072 to 90940052 52980 + lincRNA gene predicted gene 45159
Tssr67771 7 90887282 to 90887312 30 + TSS region transcription start site region 67771
Tssr67772 7 90887338 to 90887359 21 + TSS region transcription start site region 67772
Tssr67773 7 90887365 to 90887386 21 + TSS region transcription start site region 67773
Tssr67774 7 90887596 to 90887607 11 + TSS region transcription start site region 67774
Tssr67775 7 90954724 to 90954751 27 + TSS region transcription start site region 67775
Tssr67776 7 90965786 to 90965799 13 + TSS region transcription start site region 67776
Tssr67777 7 90972386 to 90972403 17 + TSS region transcription start site region 67777
Tssr67778 7 90972427 to 90972442 15 + TSS region transcription start site region 67778
Gm45178 7 90995309 to 90999418 4109 + unclassified gene predicted gene 45178
Gm39048 7 91015739 to 91016298 559 + lncRNA gene predicted gene, 39048
Gm45179 7 91048999 to 91053335 4336 + unclassified gene predicted gene 45179
Stmm2b 7 91076757 to 91076757 0 QTL skin tumor modifier of MSM 2a
Tssr67779 7 91090697 to 91090727 30 + TSS region transcription start site region 67779
Tssr67780 7 91090728 to 91090751 23 + TSS region transcription start site region 67780
Tssr67781 7 91090810 to 91090847 37 + TSS region transcription start site region 67781
Tssr67782 7 91090873 to 91090887 14 + TSS region transcription start site region 67782
Tssr67783 7 91090888 to 91090902 14 + TSS region transcription start site region 67783
Tssr67784 7 91090912 to 91090927 15 + TSS region transcription start site region 67784
Tssr67785 7 91090932 to 91090951 19 + TSS region transcription start site region 67785
Tssr67786 7 91108795 to 91108805 10 + TSS region transcription start site region 67786
Tssr67787 7 91108817 to 91108829 12 + TSS region transcription start site region 67787
Tssr67788 7 91118309 to 91118314 5 + TSS region transcription start site region 67788
Gm27470 7 91123002 to 91123211 209 - unclassified non-coding RNA gene predicted gene, 27470
Gm27660 7 91126348 to 91126555 207 - unclassified non-coding RNA gene predicted gene, 27660
Gm45176 7 91131841 to 91135936 4095 + unclassified gene predicted gene 45176
Tssr67789 7 91138297 to 91138310 13 + TSS region transcription start site region 67789
Gm45177 7 91139964 to 91142270 2306 + unclassified gene predicted gene 45177
Tssr67790 7 91143676 to 91143681 5 + TSS region transcription start site region 67790
Tssr67791 7 91156852 to 91156855 3 + TSS region transcription start site region 67791
Gm45182 7 91158600 to 91161003 2403 + unclassified gene predicted gene 45182
Tssr67792 7 91162533 to 91162544 11 + TSS region transcription start site region 67792
Tssr67793 7 91162659 to 91162690 31 + TSS region transcription start site region 67793
Tssr67794 7 91176779 to 91176788 9 + TSS region transcription start site region 67794
Tssr67795 7 91176911 to 91176928 17 + TSS region transcription start site region 67795
Tssr67796 7 91226518 to 91226522 4 + TSS region transcription start site region 67796
Gm24552 7 91242995 to 91243097 102 + snRNA gene predicted gene, 24552
Tssr67797 7 91250748 to 91250768 20 + TSS region transcription start site region 67797
Tssr67798 7 91253275 to 91253285 10 + TSS region transcription start site region 67798
Cpgi19403 7 91262094 to 91262352 258 CpG island CpG island 19403
Tssr67799 7 91262121 to 91262144 23 + TSS region transcription start site region 67799
Tssr67800 7 91262309 to 91262338 29 + TSS region transcription start site region 67800
Tssr67801 7 91262340 to 91262358 18 + TSS region transcription start site region 67801
Tssr67802 7 91262365 to 91262374 9 + TSS region transcription start site region 67802
Cpgi19404 7 91262625 to 91262849 224 CpG island CpG island 19404
Tssr67803 7 91262692 to 91262722 30 + TSS region transcription start site region 67803
Tssr67804 7 91262723 to 91262735 12 + TSS region transcription start site region 67804
Tssr67805 7 91267369 to 91267373 4 + TSS region transcription start site region 67805
Tssr67806 7 91269310 to 91269314 4 + TSS region transcription start site region 67806
Gm45183 7 91304695 to 91306191 1496 + unclassified gene predicted gene 45183
Gm44678 7 91340016 to 91342790 2774 + unclassified gene predicted gene 44678
Tssr67807 7 91344510 to 91344515 5 + TSS region transcription start site region 67807
Tssr67808 7 91354220 to 91354225 5 + TSS region transcription start site region 67808
Gm22080 7 91392584 to 91392689 105 - snRNA gene predicted gene, 22080
Tssr67809 7 91463867 to 91463894 27 + TSS region transcription start site region 67809