Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:90199957-91000077

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Picalm 7 90130220 to 90209447 79227 + protein coding gene phosphatidylinositol binding clathrin assembly protein
Gm45220 7 90201278 to 90203786 2508 + unclassified gene predicted gene 45220
Tssr67745 7 90207635 to 90207652 17 + TSS region transcription start site region 67745
Tssr67746 7 90207725 to 90207732 7 + TSS region transcription start site region 67746
Tssr67747 7 90207741 to 90207762 21 + TSS region transcription start site region 67747
Tssr67748 7 90207821 to 90207837 16 + TSS region transcription start site region 67748
Tssr67749 7 90207905 to 90207916 11 + TSS region transcription start site region 67749
Tssr67750 7 90208769 to 90208783 14 + TSS region transcription start site region 67750
Tssr67751 7 90208999 to 90209010 11 + TSS region transcription start site region 67751
Tssr67752 7 90211713 to 90211725 12 + TSS region transcription start site region 67752
Ccdc83 7 90223873 to 90265777 41904 - protein coding gene coiled-coil domain containing 83
Tssr73532 7 90265370 to 90265374 4 - TSS region transcription start site region 73532
Tssr73533 7 90265377 to 90265395 18 - TSS region transcription start site region 73533
Tssr73534 7 90265402 to 90265444 42 - TSS region transcription start site region 73534
Tssr73535 7 90265446 to 90265457 11 - TSS region transcription start site region 73535
Cpgi19397 7 90265598 to 90265942 344 CpG island CpG island 19397
Tssr67753 7 90283795 to 90283801 6 + TSS region transcription start site region 67753
n-R5s155 7 90293734 to 90293846 112 + rRNA gene nuclear encoded rRNA 5S 155
Cpgi19398 7 90302227 to 90302864 637 CpG island CpG island 19398
Tssr67754 7 90302237 to 90302248 11 + TSS region transcription start site region 67754
Sytl2 7 90302252 to 90410719 108467 + protein coding gene synaptotagmin-like 2
Tssr67755 7 90302359 to 90302397 38 + TSS region transcription start site region 67755
Tssr67756 7 90302400 to 90302444 44 + TSS region transcription start site region 67756
Tssr73536 7 90353893 to 90353931 38 - TSS region transcription start site region 73536
D7Cwr11D 7 90355058 to 90355287 229 DNA segment DNA segment, Chr 7, Case Western Reserve-11D
Tssr67757 7 90386975 to 90387018 43 + TSS region transcription start site region 67757
Tssr67758 7 90387041 to 90387052 11 + TSS region transcription start site region 67758
Tssr67759 7 90426494 to 90426502 8 + TSS region transcription start site region 67759
Tssr67760 7 90426508 to 90426544 36 + TSS region transcription start site region 67760
Tssr67761 7 90426555 to 90426577 22 + TSS region transcription start site region 67761
Ccdc89 7 90426577 to 90428669 2092 + protein coding gene coiled-coil domain containing 89
Cpgi19399 7 90442585 to 90444360 1775 CpG island CpG island 19399
Tssr73537 7 90442624 to 90442650 26 - TSS region transcription start site region 73537
Crebzf 7 90442729 to 90447994 5265 + protein coding gene CREB/ATF bZIP transcription factor
Tssr67762 7 90442774 to 90442865 91 + TSS region transcription start site region 67762
Tssr67763 7 90442902 to 90442921 19 + TSS region transcription start site region 67763
Tmem126a 7 90450712 to 90457208 6496 - protein coding gene transmembrane protein 126A
Tssr67764 7 90451133 to 90451137 4 + TSS region transcription start site region 67764
Cpgi19400 7 90456931 to 90457570 639 CpG island CpG island 19400
Tssr73538 7 90457142 to 90457153 11 - TSS region transcription start site region 73538
Tssr73539 7 90457167 to 90457213 46 - TSS region transcription start site region 73539
Gm44907 7 90457252 to 90458884 1632 + unclassified gene predicted gene 44907
Tssr67765 7 90457274 to 90457285 11 + TSS region transcription start site region 67765
Cpgi19401 7 90460979 to 90461199 220 CpG island CpG island 19401
Tmem126b 7 90468833 to 90475995 7162 - protein coding gene transmembrane protein 126B
Cpgi19402 7 90475713 to 90476703 990 CpG island CpG island 19402
Tssr73540 7 90475971 to 90476003 32 - TSS region transcription start site region 73540
Tssr67766 7 90476660 to 90476681 21 + TSS region transcription start site region 67766
Dlg2 7 90476672 to 92449247 1972575 + protein coding gene discs large MAGUK scaffold protein 2
Tssr67767 7 90476683 to 90476712 29 + TSS region transcription start site region 67767
Tssr67768 7 90519537 to 90519541 4 + TSS region transcription start site region 67768
Tssr67769 7 90540264 to 90540271 7 + TSS region transcription start site region 67769
Tssr73541 7 90541237 to 90541240 3 - TSS region transcription start site region 73541
D7Mit352 7 90599957 to 90600077 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 352
Tssr67770 7 90615078 to 90615092 14 + TSS region transcription start site region 67770
D7Mit300 7 90804882 to 90805006 124 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 300
Gm45162 7 90811544 to 90812161 617 - pseudogene predicted gene 45162
A930002H02Rik 7 90871603 to 90872780 1177 + unclassified gene RIKEN cDNA A930002H02 gene
Gm45161 7 90885444 to 90887706 2262 - unclassified gene predicted gene 45161
Gm45159 7 90887072 to 90940052 52980 + lincRNA gene predicted gene 45159
Tssr67771 7 90887282 to 90887312 30 + TSS region transcription start site region 67771
Tssr67772 7 90887338 to 90887359 21 + TSS region transcription start site region 67772
Tssr67773 7 90887365 to 90887386 21 + TSS region transcription start site region 67773
Tssr67774 7 90887596 to 90887607 11 + TSS region transcription start site region 67774
Tssr67775 7 90954724 to 90954751 27 + TSS region transcription start site region 67775
Tssr67776 7 90965786 to 90965799 13 + TSS region transcription start site region 67776
Tssr67777 7 90972386 to 90972403 17 + TSS region transcription start site region 67777
Tssr67778 7 90972427 to 90972442 15 + TSS region transcription start site region 67778
Gm45178 7 90995309 to 90999418 4109 + unclassified gene predicted gene 45178