Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:90161672-92764247

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255 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rigs1 7 36580590 to 92745138 56164548 QTL radiation induced gastroschisis 1
Png1 7 74676373 to 92745138 18068765 QTL Postnatal growth 1
Picalm 7 90130220 to 90209447 79227 + protein coding gene phosphatidylinositol binding clathrin assembly protein
Tssr67720 7 90163061 to 90163074 13 + TSS region transcription start site region 67720
Tssr67721 7 90163113 to 90163157 44 + TSS region transcription start site region 67721
Tssr67722 7 90164091 to 90164095 4 + TSS region transcription start site region 67722
Tssr67723 7 90165505 to 90165548 43 + TSS region transcription start site region 67723
Tssr67724 7 90166052 to 90166066 14 + TSS region transcription start site region 67724
Tssr67725 7 90166097 to 90166108 11 + TSS region transcription start site region 67725
Tssr67726 7 90166110 to 90166123 13 + TSS region transcription start site region 67726
Tssr67727 7 90166174 to 90166187 13 + TSS region transcription start site region 67727
Tssr67728 7 90168301 to 90168310 9 + TSS region transcription start site region 67728
Tssr67729 7 90168450 to 90168455 5 + TSS region transcription start site region 67729
Tssr67730 7 90176274 to 90176288 14 + TSS region transcription start site region 67730
Tssr67731 7 90176310 to 90176332 22 + TSS region transcription start site region 67731
Tssr67732 7 90176734 to 90176748 14 + TSS region transcription start site region 67732
Tssr67733 7 90182367 to 90182384 17 + TSS region transcription start site region 67733
Tssr67734 7 90182742 to 90182756 14 + TSS region transcription start site region 67734
Tssr67735 7 90182818 to 90182831 13 + TSS region transcription start site region 67735
Tssr67736 7 90182949 to 90182962 13 + TSS region transcription start site region 67736
Tssr67737 7 90183021 to 90183133 112 + TSS region transcription start site region 67737
Tssr67738 7 90183150 to 90183154 4 + TSS region transcription start site region 67738
Tssr67739 7 90183746 to 90183769 23 + TSS region transcription start site region 67739
Tssr67740 7 90184397 to 90184430 33 + TSS region transcription start site region 67740
Gm45221 7 90185927 to 90188198 2271 + unclassified gene predicted gene 45221
Tssr67741 7 90191693 to 90191706 13 + TSS region transcription start site region 67741
Tssr67742 7 90194336 to 90194339 3 + TSS region transcription start site region 67742
Tssr67743 7 90195452 to 90195463 11 + TSS region transcription start site region 67743
Tssr67744 7 90195992 to 90196014 22 + TSS region transcription start site region 67744
Gm45220 7 90201278 to 90203786 2508 + unclassified gene predicted gene 45220
Tssr67745 7 90207635 to 90207652 17 + TSS region transcription start site region 67745
Tssr67746 7 90207725 to 90207732 7 + TSS region transcription start site region 67746
Tssr67747 7 90207741 to 90207762 21 + TSS region transcription start site region 67747
Tssr67748 7 90207821 to 90207837 16 + TSS region transcription start site region 67748
Tssr67749 7 90207905 to 90207916 11 + TSS region transcription start site region 67749
Tssr67750 7 90208769 to 90208783 14 + TSS region transcription start site region 67750
Tssr67751 7 90208999 to 90209010 11 + TSS region transcription start site region 67751
Tssr67752 7 90211713 to 90211725 12 + TSS region transcription start site region 67752
Ccdc83 7 90223873 to 90265777 41904 - protein coding gene coiled-coil domain containing 83
Tssr73532 7 90265370 to 90265374 4 - TSS region transcription start site region 73532
Tssr73533 7 90265377 to 90265395 18 - TSS region transcription start site region 73533
Tssr73534 7 90265402 to 90265444 42 - TSS region transcription start site region 73534
Tssr73535 7 90265446 to 90265457 11 - TSS region transcription start site region 73535
Cpgi19397 7 90265598 to 90265942 344 CpG island CpG island 19397
Tssr67753 7 90283795 to 90283801 6 + TSS region transcription start site region 67753
n-R5s155 7 90293734 to 90293846 112 + rRNA gene nuclear encoded rRNA 5S 155
Cpgi19398 7 90302227 to 90302864 637 CpG island CpG island 19398
Tssr67754 7 90302237 to 90302248 11 + TSS region transcription start site region 67754
Sytl2 7 90302252 to 90410719 108467 + protein coding gene synaptotagmin-like 2
Tssr67755 7 90302359 to 90302397 38 + TSS region transcription start site region 67755
Tssr67756 7 90302400 to 90302444 44 + TSS region transcription start site region 67756
Tssr73536 7 90353893 to 90353931 38 - TSS region transcription start site region 73536
D7Cwr11D 7 90355058 to 90355287 229 DNA segment DNA segment, Chr 7, Case Western Reserve-11D
Tssr67757 7 90386975 to 90387018 43 + TSS region transcription start site region 67757
Tssr67758 7 90387041 to 90387052 11 + TSS region transcription start site region 67758
Tssr67759 7 90426494 to 90426502 8 + TSS region transcription start site region 67759
Tssr67760 7 90426508 to 90426544 36 + TSS region transcription start site region 67760
Tssr67761 7 90426555 to 90426577 22 + TSS region transcription start site region 67761
Ccdc89 7 90426577 to 90428669 2092 + protein coding gene coiled-coil domain containing 89
Cpgi19399 7 90442585 to 90444360 1775 CpG island CpG island 19399
Tssr73537 7 90442624 to 90442650 26 - TSS region transcription start site region 73537
Crebzf 7 90442729 to 90447994 5265 + protein coding gene CREB/ATF bZIP transcription factor
Tssr67762 7 90442774 to 90442865 91 + TSS region transcription start site region 67762
Tssr67763 7 90442902 to 90442921 19 + TSS region transcription start site region 67763
Tmem126a 7 90450712 to 90457208 6496 - protein coding gene transmembrane protein 126A
Tssr67764 7 90451133 to 90451137 4 + TSS region transcription start site region 67764
Cpgi19400 7 90456931 to 90457570 639 CpG island CpG island 19400
Tssr73538 7 90457142 to 90457153 11 - TSS region transcription start site region 73538
Tssr73539 7 90457167 to 90457213 46 - TSS region transcription start site region 73539
Gm44907 7 90457252 to 90458884 1632 + unclassified gene predicted gene 44907
Tssr67765 7 90457274 to 90457285 11 + TSS region transcription start site region 67765
Cpgi19401 7 90460979 to 90461199 220 CpG island CpG island 19401
Tmem126b 7 90468833 to 90475995 7162 - protein coding gene transmembrane protein 126B
Cpgi19402 7 90475713 to 90476703 990 CpG island CpG island 19402
Tssr73540 7 90475971 to 90476003 32 - TSS region transcription start site region 73540
Tssr67766 7 90476660 to 90476681 21 + TSS region transcription start site region 67766
Dlg2 7 90476672 to 92449247 1972575 + protein coding gene discs large MAGUK scaffold protein 2
Tssr67767 7 90476683 to 90476712 29 + TSS region transcription start site region 67767
Tssr67768 7 90519537 to 90519541 4 + TSS region transcription start site region 67768
Tssr67769 7 90540264 to 90540271 7 + TSS region transcription start site region 67769
Tssr73541 7 90541237 to 90541240 3 - TSS region transcription start site region 73541
D7Mit352 7 90599957 to 90600077 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 352
Tssr67770 7 90615078 to 90615092 14 + TSS region transcription start site region 67770
D7Mit300 7 90804882 to 90805006 124 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 300
Gm45162 7 90811544 to 90812161 617 - pseudogene predicted gene 45162
A930002H02Rik 7 90871603 to 90872780 1177 + unclassified gene RIKEN cDNA A930002H02 gene
Gm45161 7 90885444 to 90887706 2262 - unclassified gene predicted gene 45161
Gm45159 7 90887072 to 90940052 52980 + lincRNA gene predicted gene 45159
Tssr67771 7 90887282 to 90887312 30 + TSS region transcription start site region 67771
Tssr67772 7 90887338 to 90887359 21 + TSS region transcription start site region 67772
Tssr67773 7 90887365 to 90887386 21 + TSS region transcription start site region 67773
Tssr67774 7 90887596 to 90887607 11 + TSS region transcription start site region 67774
Tssr67775 7 90954724 to 90954751 27 + TSS region transcription start site region 67775
Tssr67776 7 90965786 to 90965799 13 + TSS region transcription start site region 67776
Tssr67777 7 90972386 to 90972403 17 + TSS region transcription start site region 67777
Tssr67778 7 90972427 to 90972442 15 + TSS region transcription start site region 67778
Gm45178 7 90995309 to 90999418 4109 + unclassified gene predicted gene 45178
Gm39048 7 91015739 to 91016298 559 + lncRNA gene predicted gene, 39048
Gm45179 7 91048999 to 91053335 4336 + unclassified gene predicted gene 45179
Stmm2b 7 91076757 to 91076757 0 QTL skin tumor modifier of MSM 2a
Tssr67779 7 91090697 to 91090727 30 + TSS region transcription start site region 67779
Tssr67780 7 91090728 to 91090751 23 + TSS region transcription start site region 67780
Tssr67781 7 91090810 to 91090847 37 + TSS region transcription start site region 67781
Tssr67782 7 91090873 to 91090887 14 + TSS region transcription start site region 67782
Tssr67783 7 91090888 to 91090902 14 + TSS region transcription start site region 67783
Tssr67784 7 91090912 to 91090927 15 + TSS region transcription start site region 67784
Tssr67785 7 91090932 to 91090951 19 + TSS region transcription start site region 67785
Tssr67786 7 91108795 to 91108805 10 + TSS region transcription start site region 67786
Tssr67787 7 91108817 to 91108829 12 + TSS region transcription start site region 67787
Tssr67788 7 91118309 to 91118314 5 + TSS region transcription start site region 67788
Gm27470 7 91123002 to 91123211 209 - unclassified non-coding RNA gene predicted gene, 27470
Gm27660 7 91126348 to 91126555 207 - unclassified non-coding RNA gene predicted gene, 27660
Gm45176 7 91131841 to 91135936 4095 + unclassified gene predicted gene 45176
Tssr67789 7 91138297 to 91138310 13 + TSS region transcription start site region 67789
Gm45177 7 91139964 to 91142270 2306 + unclassified gene predicted gene 45177
Tssr67790 7 91143676 to 91143681 5 + TSS region transcription start site region 67790
Tssr67791 7 91156852 to 91156855 3 + TSS region transcription start site region 67791
Gm45182 7 91158600 to 91161003 2403 + unclassified gene predicted gene 45182
Tssr67792 7 91162533 to 91162544 11 + TSS region transcription start site region 67792
Tssr67793 7 91162659 to 91162690 31 + TSS region transcription start site region 67793
Tssr67794 7 91176779 to 91176788 9 + TSS region transcription start site region 67794
Tssr67795 7 91176911 to 91176928 17 + TSS region transcription start site region 67795
Tssr67796 7 91226518 to 91226522 4 + TSS region transcription start site region 67796
Gm24552 7 91242995 to 91243097 102 + snRNA gene predicted gene, 24552
Tssr67797 7 91250748 to 91250768 20 + TSS region transcription start site region 67797
Tssr67798 7 91253275 to 91253285 10 + TSS region transcription start site region 67798
Cpgi19403 7 91262094 to 91262352 258 CpG island CpG island 19403
Tssr67799 7 91262121 to 91262144 23 + TSS region transcription start site region 67799
Tssr67800 7 91262309 to 91262338 29 + TSS region transcription start site region 67800
Tssr67801 7 91262340 to 91262358 18 + TSS region transcription start site region 67801
Tssr67802 7 91262365 to 91262374 9 + TSS region transcription start site region 67802
Cpgi19404 7 91262625 to 91262849 224 CpG island CpG island 19404
Tssr67803 7 91262692 to 91262722 30 + TSS region transcription start site region 67803
Tssr67804 7 91262723 to 91262735 12 + TSS region transcription start site region 67804
Tssr67805 7 91267369 to 91267373 4 + TSS region transcription start site region 67805
Tssr67806 7 91269310 to 91269314 4 + TSS region transcription start site region 67806
Gm45183 7 91304695 to 91306191 1496 + unclassified gene predicted gene 45183
Gm44678 7 91340016 to 91342790 2774 + unclassified gene predicted gene 44678
Tssr67807 7 91344510 to 91344515 5 + TSS region transcription start site region 67807
Tssr67808 7 91354220 to 91354225 5 + TSS region transcription start site region 67808
Gm22080 7 91392584 to 91392689 105 - snRNA gene predicted gene, 22080
Tssr67809 7 91463867 to 91463894 27 + TSS region transcription start site region 67809
Tssr67810 7 91488692 to 91488694 2 + TSS region transcription start site region 67810
Tssr67811 7 91508644 to 91508648 4 + TSS region transcription start site region 67811
Tssr67812 7 91509144 to 91509149 5 + TSS region transcription start site region 67812
Gm44679 7 91519115 to 91522022 2907 + unclassified gene predicted gene 44679
Cpgi19405 7 91542581 to 91543255 674 CpG island CpG island 19405
Tssr67813 7 91542965 to 91542993 28 + TSS region transcription start site region 67813
Tssr67814 7 91542994 to 91543043 49 + TSS region transcription start site region 67814
Tssr67815 7 91543064 to 91543095 31 + TSS region transcription start site region 67815
Tssr67816 7 91563079 to 91563086 7 + TSS region transcription start site region 67816
Gm44675 7 91564367 to 91567293 2926 + unclassified gene predicted gene 44675
Tssr67817 7 91564671 to 91564680 9 + TSS region transcription start site region 67817
D7Dcr38 7 91583902 to 91584030 128 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 38
D7Mit301 7 91583911 to 91584031 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 301
Gm44676 7 91608956 to 91612010 3054 + unclassified gene predicted gene 44676
Tssr67818 7 91608982 to 91608986 4 + TSS region transcription start site region 67818
Gm44677 7 91627272 to 91631010 3738 + unclassified gene predicted gene 44677
Gm44680 7 91635239 to 91638148 2909 + unclassified gene predicted gene 44680
Gm44681 7 91647711 to 91648552 841 + unclassified gene predicted gene 44681
Tssr67819 7 91647713 to 91647715 2 + TSS region transcription start site region 67819
Gm23928 7 91667149 to 91667293 144 - snRNA gene predicted gene, 23928
Tssr67820 7 91672381 to 91672390 9 + TSS region transcription start site region 67820
Tssr67821 7 91672430 to 91672448 18 + TSS region transcription start site region 67821
Tssr67822 7 91672455 to 91672483 28 + TSS region transcription start site region 67822
Tssr67823 7 91672486 to 91672497 11 + TSS region transcription start site region 67823
Tssr67824 7 91672637 to 91672657 20 + TSS region transcription start site region 67824
C030038I04Rik 7 91689469 to 91690208 739 + unclassified gene RIKEN cDNA C030038I04 gene
Tssr67825 7 91711663 to 91711687 24 + TSS region transcription start site region 67825
Tssr67826 7 91754607 to 91754623 16 + TSS region transcription start site region 67826
Gm45130 7 91816167 to 91819554 3387 + unclassified gene predicted gene 45130
Gm45129 7 91908063 to 91910286 2223 + unclassified gene predicted gene 45129
Gm32353 7 91932765 to 91960762 27997 - lncRNA gene predicted gene, 32353
Tssr67827 7 92062392 to 92062425 33 + TSS region transcription start site region 67827
Gm45131 7 92064593 to 92067174 2581 + unclassified gene predicted gene 45131
4931412I15Rik 7 92081089 to 92082536 1447 - unclassified gene RIKEN cDNA 4931412I15 gene
4930567K12Rik 7 92092206 to 92119511 27305 - antisense lncRNA gene RIKEN cDNA 4930567K12 gene
Tssr67828 7 92129708 to 92129712 4 + TSS region transcription start site region 67828
Tssr67829 7 92143084 to 92143092 8 + TSS region transcription start site region 67829
Cpgi19406 7 92180538 to 92180992 454 CpG island CpG island 19406
Tssr67830 7 92180610 to 92180621 11 + TSS region transcription start site region 67830
Tssr67831 7 92180678 to 92180734 56 + TSS region transcription start site region 67831
Tssr67832 7 92180874 to 92180896 22 + TSS region transcription start site region 67832
Tssr67833 7 92234940 to 92234970 30 + TSS region transcription start site region 67833
Tssr67834 7 92234974 to 92234997 23 + TSS region transcription start site region 67834
Tssr67835 7 92235079 to 92235123 44 + TSS region transcription start site region 67835
Tssr67836 7 92235135 to 92235144 9 + TSS region transcription start site region 67836
Tssr67837 7 92236168 to 92236173 5 + TSS region transcription start site region 67837
Tssr73542 7 92258674 to 92258688 14 - TSS region transcription start site region 73542
Tssr73543 7 92258692 to 92258701 9 - TSS region transcription start site region 73543
Tssr67838 7 92258823 to 92258832 9 + TSS region transcription start site region 67838
Tssr67839 7 92324659 to 92324663 4 + TSS region transcription start site region 67839
Tssr67840 7 92336590 to 92336628 38 + TSS region transcription start site region 67840
Tssr67841 7 92348216 to 92348246 30 + TSS region transcription start site region 67841
Tssr67842 7 92393409 to 92393413 4 + TSS region transcription start site region 67842
Tssr67843 7 92402698 to 92402706 8 + TSS region transcription start site region 67843
B230206I08Rik 7 92408184 to 92411374 3190 + unclassified gene RIKEN cDNA B230206I08 gene
Tssr67844 7 92420787 to 92420791 4 + TSS region transcription start site region 67844
Gm45201 7 92431170 to 92433848 2678 + unclassified gene predicted gene 45201
Tssr67845 7 92447280 to 92447285 5 + TSS region transcription start site region 67845