Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:89784987-90145394

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Me3 7 89632392 to 89854359 221967 + protein coding gene malic enzyme 3, NADP(+)-dependent, mitochondrial
Gm45793 7 89827218 to 89828559 1341 + unclassified gene predicted gene 45793
Ccdc81 7 89866148 to 89903629 37481 - protein coding gene coiled-coil domain containing 81
Tssr73498 7 89903578 to 89903633 55 - TSS region transcription start site region 73498
Hikeshi 7 89917529 to 89941204 23675 - protein coding gene heat shock protein nuclear import factor
Cpgi19394 7 89940648 to 89941348 700 CpG island CpG island 19394
Tssr73499 7 89941042 to 89941053 11 - TSS region transcription start site region 73499
Tssr73500 7 89941067 to 89941070 3 - TSS region transcription start site region 73500
Tssr73501 7 89941136 to 89941174 38 - TSS region transcription start site region 73501
Tssr73502 7 89941196 to 89941213 17 - TSS region transcription start site region 73502
Tssr73503 7 89941220 to 89941223 3 - TSS region transcription start site region 73503
Eed 7 89954654 to 89980983 26329 - protein coding gene embryonic ectoderm development
Gm45120 7 89964987 to 89965394 407 - unclassified gene predicted gene 45120
Cpgi19395 7 89979806 to 89981411 1605 CpG island CpG island 19395
Tssr73504 7 89980246 to 89980259 13 - TSS region transcription start site region 73504
Tssr73505 7 89980481 to 89980496 15 - TSS region transcription start site region 73505
Tssr73506 7 89980504 to 89980586 82 - TSS region transcription start site region 73506
Tssr73507 7 89980601 to 89980625 24 - TSS region transcription start site region 73507
Tssr67684 7 89980720 to 89980759 39 + TSS region transcription start site region 67684
Tssr73508 7 89980883 to 89980908 25 - TSS region transcription start site region 73508
Tssr73509 7 89980935 to 89981009 74 - TSS region transcription start site region 73509
Tssr67685 7 89981247 to 89981266 19 + TSS region transcription start site region 67685
Tssr67686 7 90007736 to 90007745 9 + TSS region transcription start site region 67686
Tssr73510 7 90019638 to 90019657 19 - TSS region transcription start site region 73510
Tssr73511 7 90023059 to 90023080 21 - TSS region transcription start site region 73511
Tssr67687 7 90023410 to 90023413 3 + TSS region transcription start site region 67687
Tssr73512 7 90024620 to 90024624 4 - TSS region transcription start site region 73512
Tssr67688 7 90025219 to 90025228 9 + TSS region transcription start site region 67688
Tssr2325 7 90029134 to 90029150 16 + TSS region transcription start site region 2325
Tssr67689 7 90029153 to 90029184 31 + TSS region transcription start site region 67689
E230029C05Rik 7 90029159 to 90049071 19912 + lncRNA gene RIKEN cDNA E230029C05 gene
Tssr67690 7 90030029 to 90030072 43 + TSS region transcription start site region 67690
Gm44860 7 90030571 to 90032916 2345 + unclassified gene predicted gene 44860
Gm44861 7 90042697 to 90043916 1219 + unclassified gene predicted gene 44861
Gm45993 7 90043432 to 90047523 4091 - lncRNA gene predicted gene, 45993
Tssr73513 7 90046363 to 90046401 38 - TSS region transcription start site region 73513
Tssr73514 7 90046977 to 90047012 35 - TSS region transcription start site region 73514
Tssr73515 7 90047033 to 90047042 9 - TSS region transcription start site region 73515
Gm32164 7 90055375 to 90063506 8131 - lncRNA gene predicted gene, 32164
Tssr2326 7 90059955 to 90059963 8 - TSS region transcription start site region 2326
Tssr67691 7 90060141 to 90060183 42 + TSS region transcription start site region 67691
Tssr73516 7 90067984 to 90067999 15 - TSS region transcription start site region 73516
Tssr73517 7 90068024 to 90068027 3 - TSS region transcription start site region 73517
Tssr73518 7 90068060 to 90068064 4 - TSS region transcription start site region 73518
Tssr2327 7 90071660 to 90071692 32 + TSS region transcription start site region 2327
Gm5341 7 90107480 to 90107968 488 - pseudogene predicted pseudogene 5341
Tssr73519 7 90108077 to 90108088 11 - TSS region transcription start site region 73519
2310010J17Rik 7 90124836 to 90129936 5100 - bidirectional promoter lncRNA gene RIKEN cDNA 2310010J17 gene
Tssr73520 7 90129339 to 90129356 17 - TSS region transcription start site region 73520
Tssr67692 7 90129498 to 90129527 29 + TSS region transcription start site region 67692
Tssr73521 7 90129648 to 90129651 3 - TSS region transcription start site region 73521
Cpgi19396 7 90129708 to 90131103 1395 CpG island CpG island 19396
Tssr67693 7 90129708 to 90129715 7 + TSS region transcription start site region 67693
Tssr73522 7 90129847 to 90129852 5 - TSS region transcription start site region 73522
Tssr73523 7 90129893 to 90129913 20 - TSS region transcription start site region 73523
Tssr73524 7 90129926 to 90129961 35 - TSS region transcription start site region 73524
Tssr73525 7 90129994 to 90130045 51 - TSS region transcription start site region 73525
Tssr67694 7 90130061 to 90130084 23 + TSS region transcription start site region 67694
Tssr73526 7 90130086 to 90130108 22 - TSS region transcription start site region 73526
Tssr67695 7 90130110 to 90130121 11 + TSS region transcription start site region 67695
Tssr73527 7 90130127 to 90130175 48 - TSS region transcription start site region 73527
Picalm 7 90130220 to 90209447 79227 + protein coding gene phosphatidylinositol binding clathrin assembly protein
Tssr67696 7 90130227 to 90130279 52 + TSS region transcription start site region 67696
Tssr67697 7 90130285 to 90130300 15 + TSS region transcription start site region 67697
Tssr67698 7 90130356 to 90130367 11 + TSS region transcription start site region 67698
Tssr73528 7 90131101 to 90131112 11 - TSS region transcription start site region 73528
Tssr67699 7 90131107 to 90131134 27 + TSS region transcription start site region 67699
Tssr73529 7 90131116 to 90131127 11 - TSS region transcription start site region 73529
Tssr73530 7 90131128 to 90131138 10 - TSS region transcription start site region 73530
Tssr67700 7 90131189 to 90131193 4 + TSS region transcription start site region 67700
Tssr73531 7 90131215 to 90131243 28 - TSS region transcription start site region 73531
Tssr67701 7 90131578 to 90131627 49 + TSS region transcription start site region 67701
Gm45223 7 90132492 to 90137629 5137 + unclassified gene predicted gene 45223
Tssr67702 7 90137590 to 90137605 15 + TSS region transcription start site region 67702
Tssr67703 7 90137694 to 90137723 29 + TSS region transcription start site region 67703
Tssr67704 7 90140013 to 90140046 33 + TSS region transcription start site region 67704
Tssr67705 7 90143212 to 90143215 3 + TSS region transcription start site region 67705
Tssr67706 7 90144738 to 90144764 26 + TSS region transcription start site region 67706