Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:89728061-90598074

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173 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Me3 7 89632392 to 89854359 221967 + protein coding gene malic enzyme 3, NADP(+)-dependent, mitochondrial
Tssr67683 7 89736677 to 89736685 8 + TSS region transcription start site region 67683
Gm15744 7 89761463 to 89761675 212 - pseudogene predicted gene 15744
Gm45793 7 89827218 to 89828559 1341 + unclassified gene predicted gene 45793
Ccdc81 7 89866148 to 89903629 37481 - protein coding gene coiled-coil domain containing 81
Tssr73498 7 89903578 to 89903633 55 - TSS region transcription start site region 73498
Hikeshi 7 89917529 to 89941204 23675 - protein coding gene heat shock protein nuclear import factor
Cpgi19394 7 89940648 to 89941348 700 CpG island CpG island 19394
Tssr73499 7 89941042 to 89941053 11 - TSS region transcription start site region 73499
Tssr73500 7 89941067 to 89941070 3 - TSS region transcription start site region 73500
Tssr73501 7 89941136 to 89941174 38 - TSS region transcription start site region 73501
Tssr73502 7 89941196 to 89941213 17 - TSS region transcription start site region 73502
Tssr73503 7 89941220 to 89941223 3 - TSS region transcription start site region 73503
Eed 7 89954654 to 89980983 26329 - protein coding gene embryonic ectoderm development
Gm45120 7 89964987 to 89965394 407 - unclassified gene predicted gene 45120
Cpgi19395 7 89979806 to 89981411 1605 CpG island CpG island 19395
Tssr73504 7 89980246 to 89980259 13 - TSS region transcription start site region 73504
Tssr73505 7 89980481 to 89980496 15 - TSS region transcription start site region 73505
Tssr73506 7 89980504 to 89980586 82 - TSS region transcription start site region 73506
Tssr73507 7 89980601 to 89980625 24 - TSS region transcription start site region 73507
Tssr67684 7 89980720 to 89980759 39 + TSS region transcription start site region 67684
Tssr73508 7 89980883 to 89980908 25 - TSS region transcription start site region 73508
Tssr73509 7 89980935 to 89981009 74 - TSS region transcription start site region 73509
Tssr67685 7 89981247 to 89981266 19 + TSS region transcription start site region 67685
Tssr67686 7 90007736 to 90007745 9 + TSS region transcription start site region 67686
Tssr73510 7 90019638 to 90019657 19 - TSS region transcription start site region 73510
Tssr73511 7 90023059 to 90023080 21 - TSS region transcription start site region 73511
Tssr67687 7 90023410 to 90023413 3 + TSS region transcription start site region 67687
Tssr73512 7 90024620 to 90024624 4 - TSS region transcription start site region 73512
Tssr67688 7 90025219 to 90025228 9 + TSS region transcription start site region 67688
Tssr2325 7 90029134 to 90029150 16 + TSS region transcription start site region 2325
Tssr67689 7 90029153 to 90029184 31 + TSS region transcription start site region 67689
E230029C05Rik 7 90029159 to 90049071 19912 + lncRNA gene RIKEN cDNA E230029C05 gene
Tssr67690 7 90030029 to 90030072 43 + TSS region transcription start site region 67690
Gm44860 7 90030571 to 90032916 2345 + unclassified gene predicted gene 44860
Gm44861 7 90042697 to 90043916 1219 + unclassified gene predicted gene 44861
Gm45993 7 90043432 to 90047523 4091 - lncRNA gene predicted gene, 45993
Tssr73513 7 90046363 to 90046401 38 - TSS region transcription start site region 73513
Tssr73514 7 90046977 to 90047012 35 - TSS region transcription start site region 73514
Tssr73515 7 90047033 to 90047042 9 - TSS region transcription start site region 73515
Gm32164 7 90055375 to 90063506 8131 - lncRNA gene predicted gene, 32164
Tssr2326 7 90059955 to 90059963 8 - TSS region transcription start site region 2326
Tssr67691 7 90060141 to 90060183 42 + TSS region transcription start site region 67691
Tssr73516 7 90067984 to 90067999 15 - TSS region transcription start site region 73516
Tssr73517 7 90068024 to 90068027 3 - TSS region transcription start site region 73517
Tssr73518 7 90068060 to 90068064 4 - TSS region transcription start site region 73518
Tssr2327 7 90071660 to 90071692 32 + TSS region transcription start site region 2327
Gm5341 7 90107480 to 90107968 488 - pseudogene predicted pseudogene 5341
Tssr73519 7 90108077 to 90108088 11 - TSS region transcription start site region 73519
2310010J17Rik 7 90124836 to 90129936 5100 - bidirectional promoter lncRNA gene RIKEN cDNA 2310010J17 gene
Tssr73520 7 90129339 to 90129356 17 - TSS region transcription start site region 73520
Tssr67692 7 90129498 to 90129527 29 + TSS region transcription start site region 67692
Tssr73521 7 90129648 to 90129651 3 - TSS region transcription start site region 73521
Cpgi19396 7 90129708 to 90131103 1395 CpG island CpG island 19396
Tssr67693 7 90129708 to 90129715 7 + TSS region transcription start site region 67693
Tssr73522 7 90129847 to 90129852 5 - TSS region transcription start site region 73522
Tssr73523 7 90129893 to 90129913 20 - TSS region transcription start site region 73523
Tssr73524 7 90129926 to 90129961 35 - TSS region transcription start site region 73524
Tssr73525 7 90129994 to 90130045 51 - TSS region transcription start site region 73525
Tssr67694 7 90130061 to 90130084 23 + TSS region transcription start site region 67694
Tssr73526 7 90130086 to 90130108 22 - TSS region transcription start site region 73526
Tssr67695 7 90130110 to 90130121 11 + TSS region transcription start site region 67695
Tssr73527 7 90130127 to 90130175 48 - TSS region transcription start site region 73527
Picalm 7 90130220 to 90209447 79227 + protein coding gene phosphatidylinositol binding clathrin assembly protein
Tssr67696 7 90130227 to 90130279 52 + TSS region transcription start site region 67696
Tssr67697 7 90130285 to 90130300 15 + TSS region transcription start site region 67697
Tssr67698 7 90130356 to 90130367 11 + TSS region transcription start site region 67698
Tssr73528 7 90131101 to 90131112 11 - TSS region transcription start site region 73528
Tssr67699 7 90131107 to 90131134 27 + TSS region transcription start site region 67699
Tssr73529 7 90131116 to 90131127 11 - TSS region transcription start site region 73529
Tssr73530 7 90131128 to 90131138 10 - TSS region transcription start site region 73530
Tssr67700 7 90131189 to 90131193 4 + TSS region transcription start site region 67700
Tssr73531 7 90131215 to 90131243 28 - TSS region transcription start site region 73531
Tssr67701 7 90131578 to 90131627 49 + TSS region transcription start site region 67701
Gm45223 7 90132492 to 90137629 5137 + unclassified gene predicted gene 45223
Tssr67702 7 90137590 to 90137605 15 + TSS region transcription start site region 67702
Tssr67703 7 90137694 to 90137723 29 + TSS region transcription start site region 67703
Tssr67704 7 90140013 to 90140046 33 + TSS region transcription start site region 67704
Tssr67705 7 90143212 to 90143215 3 + TSS region transcription start site region 67705
Tssr67706 7 90144738 to 90144764 26 + TSS region transcription start site region 67706
Gm45222 7 90145948 to 90150254 4306 + unclassified gene predicted gene 45222
Tssr67707 7 90146786 to 90146804 18 + TSS region transcription start site region 67707
Tssr67708 7 90146982 to 90147005 23 + TSS region transcription start site region 67708
Tssr67709 7 90147058 to 90147076 18 + TSS region transcription start site region 67709
Tssr67710 7 90149031 to 90149035 4 + TSS region transcription start site region 67710
Tssr67711 7 90151506 to 90151516 10 + TSS region transcription start site region 67711
Tssr67712 7 90153284 to 90153286 2 + TSS region transcription start site region 67712
Tssr67713 7 90153373 to 90153380 7 + TSS region transcription start site region 67713
Tssr67714 7 90153518 to 90153535 17 + TSS region transcription start site region 67714
Tssr67715 7 90153553 to 90153569 16 + TSS region transcription start site region 67715
Tssr67716 7 90153602 to 90153626 24 + TSS region transcription start site region 67716
D7Mit32b 7 90160112 to 90160242 130 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 32b
Tssr67717 7 90160490 to 90160515 25 + TSS region transcription start site region 67717
Tssr67718 7 90160526 to 90160551 25 + TSS region transcription start site region 67718
Tssr67719 7 90161250 to 90161305 55 + TSS region transcription start site region 67719
Tssr67720 7 90163061 to 90163074 13 + TSS region transcription start site region 67720
Tssr67721 7 90163113 to 90163157 44 + TSS region transcription start site region 67721
Tssr67722 7 90164091 to 90164095 4 + TSS region transcription start site region 67722
Tssr67723 7 90165505 to 90165548 43 + TSS region transcription start site region 67723
Tssr67724 7 90166052 to 90166066 14 + TSS region transcription start site region 67724
Tssr67725 7 90166097 to 90166108 11 + TSS region transcription start site region 67725
Tssr67726 7 90166110 to 90166123 13 + TSS region transcription start site region 67726
Tssr67727 7 90166174 to 90166187 13 + TSS region transcription start site region 67727
Tssr67728 7 90168301 to 90168310 9 + TSS region transcription start site region 67728
Tssr67729 7 90168450 to 90168455 5 + TSS region transcription start site region 67729
Tssr67730 7 90176274 to 90176288 14 + TSS region transcription start site region 67730
Tssr67731 7 90176310 to 90176332 22 + TSS region transcription start site region 67731
Tssr67732 7 90176734 to 90176748 14 + TSS region transcription start site region 67732
Tssr67733 7 90182367 to 90182384 17 + TSS region transcription start site region 67733
Tssr67734 7 90182742 to 90182756 14 + TSS region transcription start site region 67734
Tssr67735 7 90182818 to 90182831 13 + TSS region transcription start site region 67735
Tssr67736 7 90182949 to 90182962 13 + TSS region transcription start site region 67736
Tssr67737 7 90183021 to 90183133 112 + TSS region transcription start site region 67737
Tssr67738 7 90183150 to 90183154 4 + TSS region transcription start site region 67738
Tssr67739 7 90183746 to 90183769 23 + TSS region transcription start site region 67739
Tssr67740 7 90184397 to 90184430 33 + TSS region transcription start site region 67740
Gm45221 7 90185927 to 90188198 2271 + unclassified gene predicted gene 45221
Tssr67741 7 90191693 to 90191706 13 + TSS region transcription start site region 67741
Tssr67742 7 90194336 to 90194339 3 + TSS region transcription start site region 67742
Tssr67743 7 90195452 to 90195463 11 + TSS region transcription start site region 67743
Tssr67744 7 90195992 to 90196014 22 + TSS region transcription start site region 67744
Gm45220 7 90201278 to 90203786 2508 + unclassified gene predicted gene 45220
Tssr67745 7 90207635 to 90207652 17 + TSS region transcription start site region 67745
Tssr67746 7 90207725 to 90207732 7 + TSS region transcription start site region 67746
Tssr67747 7 90207741 to 90207762 21 + TSS region transcription start site region 67747
Tssr67748 7 90207821 to 90207837 16 + TSS region transcription start site region 67748
Tssr67749 7 90207905 to 90207916 11 + TSS region transcription start site region 67749
Tssr67750 7 90208769 to 90208783 14 + TSS region transcription start site region 67750
Tssr67751 7 90208999 to 90209010 11 + TSS region transcription start site region 67751
Tssr67752 7 90211713 to 90211725 12 + TSS region transcription start site region 67752
Ccdc83 7 90223873 to 90265777 41904 - protein coding gene coiled-coil domain containing 83
Tssr73532 7 90265370 to 90265374 4 - TSS region transcription start site region 73532
Tssr73533 7 90265377 to 90265395 18 - TSS region transcription start site region 73533
Tssr73534 7 90265402 to 90265444 42 - TSS region transcription start site region 73534
Tssr73535 7 90265446 to 90265457 11 - TSS region transcription start site region 73535
Cpgi19397 7 90265598 to 90265942 344 CpG island CpG island 19397
Tssr67753 7 90283795 to 90283801 6 + TSS region transcription start site region 67753
n-R5s155 7 90293734 to 90293846 112 + rRNA gene nuclear encoded rRNA 5S 155
Cpgi19398 7 90302227 to 90302864 637 CpG island CpG island 19398
Tssr67754 7 90302237 to 90302248 11 + TSS region transcription start site region 67754
Sytl2 7 90302252 to 90410719 108467 + protein coding gene synaptotagmin-like 2
Tssr67755 7 90302359 to 90302397 38 + TSS region transcription start site region 67755
Tssr67756 7 90302400 to 90302444 44 + TSS region transcription start site region 67756
Tssr73536 7 90353893 to 90353931 38 - TSS region transcription start site region 73536
D7Cwr11D 7 90355058 to 90355287 229 DNA segment DNA segment, Chr 7, Case Western Reserve-11D
Tssr67757 7 90386975 to 90387018 43 + TSS region transcription start site region 67757
Tssr67758 7 90387041 to 90387052 11 + TSS region transcription start site region 67758
Tssr67759 7 90426494 to 90426502 8 + TSS region transcription start site region 67759
Tssr67760 7 90426508 to 90426544 36 + TSS region transcription start site region 67760
Tssr67761 7 90426555 to 90426577 22 + TSS region transcription start site region 67761
Ccdc89 7 90426577 to 90428669 2092 + protein coding gene coiled-coil domain containing 89
Cpgi19399 7 90442585 to 90444360 1775 CpG island CpG island 19399
Tssr73537 7 90442624 to 90442650 26 - TSS region transcription start site region 73537
Crebzf 7 90442729 to 90447994 5265 + protein coding gene CREB/ATF bZIP transcription factor
Tssr67762 7 90442774 to 90442865 91 + TSS region transcription start site region 67762
Tssr67763 7 90442902 to 90442921 19 + TSS region transcription start site region 67763
Tmem126a 7 90450712 to 90457208 6496 - protein coding gene transmembrane protein 126A
Tssr67764 7 90451133 to 90451137 4 + TSS region transcription start site region 67764
Cpgi19400 7 90456931 to 90457570 639 CpG island CpG island 19400
Tssr73538 7 90457142 to 90457153 11 - TSS region transcription start site region 73538
Tssr73539 7 90457167 to 90457213 46 - TSS region transcription start site region 73539
Gm44907 7 90457252 to 90458884 1632 + unclassified gene predicted gene 44907
Tssr67765 7 90457274 to 90457285 11 + TSS region transcription start site region 67765
Cpgi19401 7 90460979 to 90461199 220 CpG island CpG island 19401
Tmem126b 7 90468833 to 90475995 7162 - protein coding gene transmembrane protein 126B
Cpgi19402 7 90475713 to 90476703 990 CpG island CpG island 19402
Tssr73540 7 90475971 to 90476003 32 - TSS region transcription start site region 73540
Tssr67766 7 90476660 to 90476681 21 + TSS region transcription start site region 67766
Dlg2 7 90476672 to 92449247 1972575 + protein coding gene discs large MAGUK scaffold protein 2
Tssr67767 7 90476683 to 90476712 29 + TSS region transcription start site region 67767
Tssr67768 7 90519537 to 90519541 4 + TSS region transcription start site region 67768
Tssr67769 7 90540264 to 90540271 7 + TSS region transcription start site region 67769
Tssr73541 7 90541237 to 90541240 3 - TSS region transcription start site region 73541