Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:89698578-90108633

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Me3 7 89632392 to 89854359 221967 + protein coding gene malic enzyme 3, NADP(+)-dependent, mitochondrial
Tssr67682 7 89721401 to 89721405 4 + TSS region transcription start site region 67682
Tssr67683 7 89736677 to 89736685 8 + TSS region transcription start site region 67683
Gm15744 7 89761463 to 89761675 212 - pseudogene predicted gene 15744
Gm45793 7 89827218 to 89828559 1341 + unclassified gene predicted gene 45793
Ccdc81 7 89866148 to 89903629 37481 - protein coding gene coiled-coil domain containing 81
Tssr73498 7 89903578 to 89903633 55 - TSS region transcription start site region 73498
Hikeshi 7 89917529 to 89941204 23675 - protein coding gene heat shock protein nuclear import factor
Cpgi19394 7 89940648 to 89941348 700 CpG island CpG island 19394
Tssr73499 7 89941042 to 89941053 11 - TSS region transcription start site region 73499
Tssr73500 7 89941067 to 89941070 3 - TSS region transcription start site region 73500
Tssr73501 7 89941136 to 89941174 38 - TSS region transcription start site region 73501
Tssr73502 7 89941196 to 89941213 17 - TSS region transcription start site region 73502
Tssr73503 7 89941220 to 89941223 3 - TSS region transcription start site region 73503
Eed 7 89954654 to 89980983 26329 - protein coding gene embryonic ectoderm development
Gm45120 7 89964987 to 89965394 407 - unclassified gene predicted gene 45120
Cpgi19395 7 89979806 to 89981411 1605 CpG island CpG island 19395
Tssr73504 7 89980246 to 89980259 13 - TSS region transcription start site region 73504
Tssr73505 7 89980481 to 89980496 15 - TSS region transcription start site region 73505
Tssr73506 7 89980504 to 89980586 82 - TSS region transcription start site region 73506
Tssr73507 7 89980601 to 89980625 24 - TSS region transcription start site region 73507
Tssr67684 7 89980720 to 89980759 39 + TSS region transcription start site region 67684
Tssr73508 7 89980883 to 89980908 25 - TSS region transcription start site region 73508
Tssr73509 7 89980935 to 89981009 74 - TSS region transcription start site region 73509
Tssr67685 7 89981247 to 89981266 19 + TSS region transcription start site region 67685
Tssr67686 7 90007736 to 90007745 9 + TSS region transcription start site region 67686
Tssr73510 7 90019638 to 90019657 19 - TSS region transcription start site region 73510
Tssr73511 7 90023059 to 90023080 21 - TSS region transcription start site region 73511
Tssr67687 7 90023410 to 90023413 3 + TSS region transcription start site region 67687
Tssr73512 7 90024620 to 90024624 4 - TSS region transcription start site region 73512
Tssr67688 7 90025219 to 90025228 9 + TSS region transcription start site region 67688
Tssr2325 7 90029134 to 90029150 16 + TSS region transcription start site region 2325
Tssr67689 7 90029153 to 90029184 31 + TSS region transcription start site region 67689
E230029C05Rik 7 90029159 to 90049071 19912 + lncRNA gene RIKEN cDNA E230029C05 gene
Tssr67690 7 90030029 to 90030072 43 + TSS region transcription start site region 67690
Gm44860 7 90030571 to 90032916 2345 + unclassified gene predicted gene 44860
Gm44861 7 90042697 to 90043916 1219 + unclassified gene predicted gene 44861
Gm45993 7 90043432 to 90047523 4091 - lncRNA gene predicted gene, 45993
Tssr73513 7 90046363 to 90046401 38 - TSS region transcription start site region 73513
Tssr73514 7 90046977 to 90047012 35 - TSS region transcription start site region 73514
Tssr73515 7 90047033 to 90047042 9 - TSS region transcription start site region 73515
Gm32164 7 90055375 to 90063506 8131 - lncRNA gene predicted gene, 32164
Tssr2326 7 90059955 to 90059963 8 - TSS region transcription start site region 2326
Tssr67691 7 90060141 to 90060183 42 + TSS region transcription start site region 67691
Tssr73516 7 90067984 to 90067999 15 - TSS region transcription start site region 73516
Tssr73517 7 90068024 to 90068027 3 - TSS region transcription start site region 73517
Tssr73518 7 90068060 to 90068064 4 - TSS region transcription start site region 73518
Tssr2327 7 90071660 to 90071692 32 + TSS region transcription start site region 2327
Gm5341 7 90107480 to 90107968 488 - pseudogene predicted pseudogene 5341
Tssr73519 7 90108077 to 90108088 11 - TSS region transcription start site region 73519