Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:88965108-89467097

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rta1 7 67518279 to 89440781 21922502 QTL retinal aging 1
D7Dcr37 7 89014244 to 89014346 102 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 37
D7Mit123.1 7 89038953 to 89039087 134 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 123.1
D7Mit123 7 89039030 to 89039170 140 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 123
Tmem135 7 89139714 to 89404222 264508 - protein coding gene transmembrane protein 135
Tssr73470 7 89188310 to 89188315 5 - TSS region transcription start site region 73470
Tssr73471 7 89189714 to 89189721 7 - TSS region transcription start site region 73471
Gm44704 7 89215108 to 89217097 1989 - unclassified gene predicted gene 44704
Gm24659 7 89291190 to 89291299 109 - miRNA gene predicted gene, 24659
Gm22171 7 89295755 to 89295864 109 - miRNA gene predicted gene, 22171
Tssr73472 7 89328724 to 89328727 3 - TSS region transcription start site region 73472
Cpgi19390 7 89338240 to 89339071 831 CpG island CpG island 19390
Gm44995 7 89338370 to 89346288 7918 + antisense lncRNA gene predicted gene 44995
Tssr2323 7 89338418 to 89338422 4 + TSS region transcription start site region 2323
Tssr73473 7 89338589 to 89338600 11 - TSS region transcription start site region 73473
Tssr73474 7 89338605 to 89338632 27 - TSS region transcription start site region 73474
Tssr73475 7 89338646 to 89338666 20 - TSS region transcription start site region 73475
Tssr73476 7 89338669 to 89338680 11 - TSS region transcription start site region 73476
Tssr73477 7 89338685 to 89338705 20 - TSS region transcription start site region 73477
Tssr73478 7 89338709 to 89338795 86 - TSS region transcription start site region 73478
Tssr73479 7 89338912 to 89338919 7 - TSS region transcription start site region 73479
Gm44996 7 89388344 to 89391323 2979 - unclassified gene predicted gene 44996
Tssr67660 7 89392050 to 89392091 41 + TSS region transcription start site region 67660
Cpgi19391 7 89403352 to 89405055 1703 CpG island CpG island 19391
Tssr73480 7 89404144 to 89404149 5 - TSS region transcription start site region 73480
Tssr73481 7 89404191 to 89404204 13 - TSS region transcription start site region 73481
Tssr73482 7 89404210 to 89404237 27 - TSS region transcription start site region 73482
Tssr67661 7 89404356 to 89404367 11 + TSS region transcription start site region 67661
Fzd4 7 89404366 to 89410110 5744 + protein coding gene frizzled class receptor 4
Tssr67662 7 89404370 to 89404401 31 + TSS region transcription start site region 67662
Tssr67663 7 89406956 to 89406961 5 + TSS region transcription start site region 67663
Tssr67664 7 89426270 to 89426277 7 + TSS region transcription start site region 67664
Tssr67665 7 89426280 to 89426293 13 + TSS region transcription start site region 67665
Tssr67666 7 89426300 to 89426323 23 + TSS region transcription start site region 67666
AI314278 7 89426306 to 89432077 5771 + lincRNA gene expressed sequence AI314278
Tssr67667 7 89426330 to 89426353 23 + TSS region transcription start site region 67667
Tssr67668 7 89426923 to 89426926 3 + TSS region transcription start site region 67668
D7Mit320 7 89436896 to 89436978 82 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 320