Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:88300446-88760898

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctsc 7 88278085 to 88310888 32803 + protein coding gene cathepsin C
Tssr67647 7 88302181 to 88302203 22 + TSS region transcription start site region 67647
Tssr73467 7 88302214 to 88302233 19 - TSS region transcription start site region 73467
Tssr67648 7 88302263 to 88302275 12 + TSS region transcription start site region 67648
Tssr67649 7 88308049 to 88308058 9 + TSS region transcription start site region 67649
Tssr73468 7 88308078 to 88308102 24 - TSS region transcription start site region 73468
Tssr67650 7 88308109 to 88308127 18 + TSS region transcription start site region 67650
Tssr67651 7 88309458 to 88309477 19 + TSS region transcription start site region 67651
Tssr67652 7 88309685 to 88309692 7 + TSS region transcription start site region 67652
Tssr67653 7 88309806 to 88309823 17 + TSS region transcription start site region 67653
Tssr67654 7 88309922 to 88309943 21 + TSS region transcription start site region 67654
Tssr67655 7 88309973 to 88309981 8 + TSS region transcription start site region 67655
Gm44751 7 88311478 to 88315864 4386 + lincRNA gene predicted gene 44751
Gm25345 7 88343969 to 88344101 132 + snoRNA gene predicted gene, 25345
C330001P17Rik 7 88348144 to 88349055 911 unclassified gene RIKEN cDNA C330001P17 gene
Gm2407 7 88349311 to 88356590 7279 - pseudogene predicted gene 2407
Cpgi19389 7 88430243 to 88430739 496 CpG island CpG island 19389
Tssr67656 7 88430257 to 88430286 29 + TSS region transcription start site region 67656
Rab38 7 88430273 to 88491572 61299 + protein coding gene RAB38, member RAS oncogene family
Tssr67657 7 88430299 to 88430320 21 + TSS region transcription start site region 67657
Tssr67658 7 88430326 to 88430364 38 + TSS region transcription start site region 67658
Tssr67659 7 88430863 to 88430865 2 + TSS region transcription start site region 67659
Gm15661 7 88448675 to 88449230 555 - pseudogene predicted gene 15661
Rps13-ps2 7 88530446 to 88530898 452 - pseudogene ribosomal protein S13, pseudogene 2
Tssr73469 7 88530926 to 88530928 2 - TSS region transcription start site region 73469
Gm8183 7 88571870 to 88572849 979 - pseudogene predicted gene 8183
D7Dcr36 7 88738995 to 88739090 95 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 36