Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:87850326-89010364

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Grm5 7 87584168 to 88134907 550739 + protein coding gene glutamate receptor, metabotropic 5
Tssr67620 7 87861719 to 87861737 18 + TSS region transcription start site region 67620
Slpapn1 7 87884432 to 87884432 0 QTL average percent sleep per night
Gm44927 7 87890749 to 87891464 715 + unclassified gene predicted gene 44927
Albc2 7 88000000 to 96000000 8000000 QTL albino coat color QTL 2
Gm44848 7 88063061 to 88066294 3233 + unclassified gene predicted gene 44848
Gm44847 7 88082813 to 88084803 1990 + unclassified gene predicted gene 44847
Gm24249 7 88087188 to 88087251 63 - snRNA gene predicted gene, 24249
Gm44846 7 88119158 to 88122400 3242 + unclassified gene predicted gene 44846
Cpgi19387 7 88130035 to 88130903 868 CpG island CpG island 19387
Tssr67621 7 88219538 to 88219547 9 + TSS region transcription start site region 67621
Tssr67622 7 88221929 to 88221934 5 + TSS region transcription start site region 67622
Cpgi19388 7 88277945 to 88278400 455 CpG island CpG island 19388
Ctsc 7 88278085 to 88310888 32803 + protein coding gene cathepsin C
Tssr67623 7 88278126 to 88278141 15 + TSS region transcription start site region 67623
Tssr67624 7 88278780 to 88278788 8 + TSS region transcription start site region 67624
Gm26522 7 88278787 to 88283529 4742 - lincRNA gene predicted gene, 26522
Tssr67625 7 88280494 to 88280538 44 + TSS region transcription start site region 67625
Tssr67626 7 88280582 to 88280592 10 + TSS region transcription start site region 67626
Tssr67627 7 88280608 to 88280621 13 + TSS region transcription start site region 67627
Tssr67628 7 88280969 to 88280974 5 + TSS region transcription start site region 67628
Tssr67629 7 88281379 to 88281505 126 + TSS region transcription start site region 67629
Tssr67630 7 88283898 to 88283916 18 + TSS region transcription start site region 67630
Tssr67631 7 88288750 to 88288761 11 + TSS region transcription start site region 67631
Tssr67632 7 88288943 to 88288955 12 + TSS region transcription start site region 67632
Tssr67633 7 88288971 to 88288984 13 + TSS region transcription start site region 67633
Tssr67634 7 88290451 to 88290461 10 + TSS region transcription start site region 67634
Tssr67635 7 88290597 to 88290607 10 + TSS region transcription start site region 67635
Tssr67636 7 88290825 to 88290838 13 + TSS region transcription start site region 67636
Tssr67637 7 88290873 to 88290888 15 + TSS region transcription start site region 67637
Tssr67638 7 88290897 to 88290913 16 + TSS region transcription start site region 67638
Tssr67639 7 88290955 to 88290964 9 + TSS region transcription start site region 67639
Tssr67640 7 88290999 to 88291012 13 + TSS region transcription start site region 67640
Tssr67641 7 88297091 to 88297102 11 + TSS region transcription start site region 67641
Tssr67642 7 88297133 to 88297176 43 + TSS region transcription start site region 67642
Tssr67643 7 88297185 to 88297197 12 + TSS region transcription start site region 67643
Tssr67644 7 88297204 to 88297217 13 + TSS region transcription start site region 67644
Tssr67645 7 88297245 to 88297257 12 + TSS region transcription start site region 67645
Tssr73464 7 88299467 to 88299485 18 - TSS region transcription start site region 73464
Tssr67646 7 88299483 to 88299495 12 + TSS region transcription start site region 67646
Tssr73465 7 88299492 to 88299506 14 - TSS region transcription start site region 73465
Tssr73466 7 88299532 to 88299559 27 - TSS region transcription start site region 73466
Tssr67647 7 88302181 to 88302203 22 + TSS region transcription start site region 67647
Tssr73467 7 88302214 to 88302233 19 - TSS region transcription start site region 73467
Tssr67648 7 88302263 to 88302275 12 + TSS region transcription start site region 67648
Tssr67649 7 88308049 to 88308058 9 + TSS region transcription start site region 67649
Tssr73468 7 88308078 to 88308102 24 - TSS region transcription start site region 73468
Tssr67650 7 88308109 to 88308127 18 + TSS region transcription start site region 67650
Tssr67651 7 88309458 to 88309477 19 + TSS region transcription start site region 67651
Tssr67652 7 88309685 to 88309692 7 + TSS region transcription start site region 67652
Tssr67653 7 88309806 to 88309823 17 + TSS region transcription start site region 67653
Tssr67654 7 88309922 to 88309943 21 + TSS region transcription start site region 67654
Tssr67655 7 88309973 to 88309981 8 + TSS region transcription start site region 67655
Gm44751 7 88311478 to 88315864 4386 + lincRNA gene predicted gene 44751
Gm25345 7 88343969 to 88344101 132 + snoRNA gene predicted gene, 25345
C330001P17Rik 7 88348144 to 88349055 911 unclassified gene RIKEN cDNA C330001P17 gene
Gm2407 7 88349311 to 88356590 7279 - pseudogene predicted gene 2407
Cpgi19389 7 88430243 to 88430739 496 CpG island CpG island 19389
Tssr67656 7 88430257 to 88430286 29 + TSS region transcription start site region 67656
Rab38 7 88430273 to 88491572 61299 + protein coding gene RAB38, member RAS oncogene family
Tssr67657 7 88430299 to 88430320 21 + TSS region transcription start site region 67657
Tssr67658 7 88430326 to 88430364 38 + TSS region transcription start site region 67658
Tssr67659 7 88430863 to 88430865 2 + TSS region transcription start site region 67659
Gm15661 7 88448675 to 88449230 555 - pseudogene predicted gene 15661
Rps13-ps2 7 88530446 to 88530898 452 - pseudogene ribosomal protein S13, pseudogene 2
Tssr73469 7 88530926 to 88530928 2 - TSS region transcription start site region 73469
Gm8183 7 88571870 to 88572849 979 - pseudogene predicted gene 8183
D7Dcr36 7 88738995 to 88739090 95 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 36
Gm6240 7 88781922 to 88782389 467 - pseudogene predicted gene 6240
Gm45144 7 88853043 to 88864892 11849 - lincRNA gene predicted gene 45144