Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:87267567-88279392

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sle3 7 3463212 to 87493512 84030300 QTL systemic lupus erythmatosus susceptibility 3
Tsve1 7 56239760 to 87493512 31253752 QTL variable short tail (Tsv) enhancer 1
Nox4 7 87246405 to 87398710 152305 + protein coding gene NADPH oxidase 4
Tssr67606 7 87278888 to 87278892 4 + TSS region transcription start site region 67606
Tssr67607 7 87281482 to 87281487 5 + TSS region transcription start site region 67607
Tssr67608 7 87304249 to 87304263 14 + TSS region transcription start site region 67608
Tssr67609 7 87304269 to 87304287 18 + TSS region transcription start site region 67609
Tssr67610 7 87304288 to 87304305 17 + TSS region transcription start site region 67610
Alcp11 7 87424771 to 87493512 68741 QTL alcohol preference locus 11, male specific
Alcp13 7 87424771 to 87493512 68741 QTL alcohol preference locus 13, female specific
Lorp1 7 87424771 to 87493512 68741 QTL loss of righting due to propofol 1
Tlag1 7 87424771 to 87493512 68741 QTL T lymphoma attenuation gene 1
Tyr 7 87424771 to 87493512 68741 - protein coding gene tyrosinase
D0Nds35 7 87428752 to 87428902 150 DNA segment DNA segment, Nuffield Department of Surgery 35
D0Nds37 7 87429084 to 87429168 84 DNA segment DNA segment, Nuffield Department of Surgery 37
D7Mit216 7 87447195 to 87447372 177 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 216
Tssr73462 7 87493327 to 87493340 13 - TSS region transcription start site region 73462
Tssr73463 7 87493371 to 87493438 67 - TSS region transcription start site region 73463
D7Mit31 7 87493929 to 87494171 242 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 31
Bpq7 7 87493929 to 87494171 242 QTL blood pressure QTL 7
chtl 7 87493929 to 97902584 10408655 heritable phenotypic marker chocolate-like
Tssr67611 7 87583948 to 87583957 9 + TSS region transcription start site region 67611
Tssr67612 7 87584117 to 87584130 13 + TSS region transcription start site region 67612
Tssr67613 7 87584140 to 87584173 33 + TSS region transcription start site region 67613
Grm5 7 87584168 to 88134907 550739 + protein coding gene glutamate receptor, metabotropic 5
Cpgi19386 7 87584179 to 87584627 448 CpG island CpG island 19386
Tssr67614 7 87584322 to 87584327 5 + TSS region transcription start site region 67614
Tssr67615 7 87584347 to 87584451 104 + TSS region transcription start site region 67615
Tssr67616 7 87586472 to 87586490 18 + TSS region transcription start site region 67616
Tssr67617 7 87586495 to 87586565 70 + TSS region transcription start site region 67617
Tssr2322 7 87650179 to 87650180 1 + TSS region transcription start site region 2322
Gm18454 7 87697822 to 87699107 1285 - pseudogene predicted gene, 18454
Gm44926 7 87772567 to 87774392 1825 + unclassified gene predicted gene 44926
Tssr67618 7 87828482 to 87828485 3 + TSS region transcription start site region 67618
Tssr67619 7 87844030 to 87844039 9 + TSS region transcription start site region 67619
Tssr67620 7 87861719 to 87861737 18 + TSS region transcription start site region 67620
Slpapn1 7 87884432 to 87884432 0 QTL average percent sleep per night
Gm44927 7 87890749 to 87891464 715 + unclassified gene predicted gene 44927
Albc2 7 88000000 to 96000000 8000000 QTL albino coat color QTL 2
Gm44848 7 88063061 to 88066294 3233 + unclassified gene predicted gene 44848
Gm44847 7 88082813 to 88084803 1990 + unclassified gene predicted gene 44847
Gm24249 7 88087188 to 88087251 63 - snRNA gene predicted gene, 24249
Gm44846 7 88119158 to 88122400 3242 + unclassified gene predicted gene 44846
Cpgi19387 7 88130035 to 88130903 868 CpG island CpG island 19387
Tssr67621 7 88219538 to 88219547 9 + TSS region transcription start site region 67621
Tssr67622 7 88221929 to 88221934 5 + TSS region transcription start site region 67622
Cpgi19388 7 88277945 to 88278400 455 CpG island CpG island 19388
Ctsc 7 88278085 to 88310888 32803 + protein coding gene cathepsin C
Tssr67623 7 88278126 to 88278141 15 + TSS region transcription start site region 67623
Tssr67624 7 88278780 to 88278788 8 + TSS region transcription start site region 67624
Gm26522 7 88278787 to 88283529 4742 - lincRNA gene predicted gene, 26522
Capsq3 7 119886157 to 87493929 -32392228 QTL capsaicin sensitivity related QTL 3