Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:86769269-87839287

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sle3 7 3463212 to 87493512 84030300 QTL systemic lupus erythmatosus susceptibility 3
Tsve1 7 56239760 to 87493512 31253752 QTL variable short tail (Tsv) enhancer 1
Folh1 7 86718977 to 86775943 56966 - protein coding gene folate hydrolase 1
Tssr73454 7 86775576 to 86775587 11 - TSS region transcription start site region 73454
Tssr73455 7 86775759 to 86775776 17 - TSS region transcription start site region 73455
Tssr73456 7 86775792 to 86775806 14 - TSS region transcription start site region 73456
Tssr73457 7 86775809 to 86775839 30 - TSS region transcription start site region 73457
Tssr73458 7 86775860 to 86775872 12 - TSS region transcription start site region 73458
Tssr73459 7 86775939 to 86775948 9 - TSS region transcription start site region 73459
Tssr73460 7 86775953 to 86775962 9 - TSS region transcription start site region 73460
Tssr73461 7 86775968 to 86775978 10 - TSS region transcription start site region 73461
Vmn2r77 7 86795141 to 86812032 16891 + protein coding gene vomeronasal 2, receptor 77
Vmn2r-ps87 7 86884865 to 86885740 875 + pseudogene vomeronasal 2, receptor, pseudogene 87
Gm39047 7 86890298 to 86897738 7440 + lncRNA gene predicted gene, 39047
Gm19203 7 86906996 to 86907934 938 - pseudogene predicted gene, 19203
Vmn2r78 7 86915349 to 86955177 39828 + protein coding gene vomeronasal 2, receptor 78
Vmn2r79 7 86996465 to 87037968 41503 + protein coding gene vomeronasal 2, receptor 79
Gm44925 7 87118867 to 87120976 2109 + unclassified gene predicted gene 44925
Gm6230 7 87242106 to 87242885 779 - pseudogene predicted gene 6230
Nox4 7 87246405 to 87398710 152305 + protein coding gene NADPH oxidase 4
Cpgi19385 7 87246457 to 87246988 531 CpG island CpG island 19385
Tssr67600 7 87246656 to 87246661 5 + TSS region transcription start site region 67600
Tssr67601 7 87246687 to 87246692 5 + TSS region transcription start site region 67601
Tssr67602 7 87246708 to 87246719 11 + TSS region transcription start site region 67602
Tssr67603 7 87246788 to 87246807 19 + TSS region transcription start site region 67603
Tssr67604 7 87246819 to 87246832 13 + TSS region transcription start site region 67604
Tssr67605 7 87253358 to 87253376 18 + TSS region transcription start site region 67605
Tssr67606 7 87278888 to 87278892 4 + TSS region transcription start site region 67606
Tssr67607 7 87281482 to 87281487 5 + TSS region transcription start site region 67607
Tssr67608 7 87304249 to 87304263 14 + TSS region transcription start site region 67608
Tssr67609 7 87304269 to 87304287 18 + TSS region transcription start site region 67609
Tssr67610 7 87304288 to 87304305 17 + TSS region transcription start site region 67610
Alcp11 7 87424771 to 87493512 68741 QTL alcohol preference locus 11, male specific
Alcp13 7 87424771 to 87493512 68741 QTL alcohol preference locus 13, female specific
Tyr 7 87424771 to 87493512 68741 - protein coding gene tyrosinase
Lorp1 7 87424771 to 87493512 68741 QTL loss of righting due to propofol 1
Tlag1 7 87424771 to 87493512 68741 QTL T lymphoma attenuation gene 1
D0Nds35 7 87428752 to 87428902 150 DNA segment DNA segment, Nuffield Department of Surgery 35
D0Nds37 7 87429084 to 87429168 84 DNA segment DNA segment, Nuffield Department of Surgery 37
D7Mit216 7 87447195 to 87447372 177 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 216
Tssr73462 7 87493327 to 87493340 13 - TSS region transcription start site region 73462
Tssr73463 7 87493371 to 87493438 67 - TSS region transcription start site region 73463
chtl 7 87493929 to 97902584 10408655 heritable phenotypic marker chocolate-like
D7Mit31 7 87493929 to 87494171 242 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 31
Bpq7 7 87493929 to 87494171 242 QTL blood pressure QTL 7
Tssr67611 7 87583948 to 87583957 9 + TSS region transcription start site region 67611
Tssr67612 7 87584117 to 87584130 13 + TSS region transcription start site region 67612
Tssr67613 7 87584140 to 87584173 33 + TSS region transcription start site region 67613
Grm5 7 87584168 to 88134907 550739 + protein coding gene glutamate receptor, metabotropic 5
Cpgi19386 7 87584179 to 87584627 448 CpG island CpG island 19386
Tssr67614 7 87584322 to 87584327 5 + TSS region transcription start site region 67614
Tssr67615 7 87584347 to 87584451 104 + TSS region transcription start site region 67615
Tssr67616 7 87586472 to 87586490 18 + TSS region transcription start site region 67616
Tssr67617 7 87586495 to 87586565 70 + TSS region transcription start site region 67617
Tssr2322 7 87650179 to 87650180 1 + TSS region transcription start site region 2322
Gm18454 7 87697822 to 87699107 1285 - pseudogene predicted gene, 18454
Gm44926 7 87772567 to 87774392 1825 + unclassified gene predicted gene 44926
Tssr67618 7 87828482 to 87828485 3 + TSS region transcription start site region 67618
Capsq3 7 119886157 to 87493929 -32392228 QTL capsaicin sensitivity related QTL 3