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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:85953977-87540943

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sle3 7 3463212 to 87493512 84030300 QTL systemic lupus erythmatosus susceptibility 3
Tsve1 7 56239760 to 87493512 31253752 QTL variable short tail (Tsv) enhancer 1
Vmn2r74 7 85951867 to 85961482 9615 - protein coding gene vomeronasal 2, receptor 74
Vmn2r-ps79 7 85967040 to 85967264 224 + pseudogene vomeronasal 2, receptor, pseudogene 79
Vmn2r-ps80 7 85997983 to 85999586 1603 - pseudogene vomeronasal 2, receptor, pseudogene 80
Vmn2r-ps81 7 86026716 to 86027553 837 + pseudogene vomeronasal 2, receptor, pseudogene 81
D7Mit234b 7 86030784 to 86030912 128 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 234b
Vmn2r-ps82 7 86053289 to 86063461 10172 - pseudogene vomeronasal 2, receptor, pseudogene 82
Vmn2r-ps83 7 86073203 to 86083066 9863 - pseudogene vomeronasal 2, receptor, pseudogene 83
Vmn2r-ps84 7 86126333 to 86127229 896 + pseudogene vomeronasal 2, receptor, pseudogene 84
Vmn2r75 7 86148042 to 86171724 23682 - protein coding gene vomeronasal 2, receptor 75
Vmn2r-ps85 7 86181228 to 86182068 840 + pseudogene vomeronasal 2, receptor, pseudogene 85
Vmn2r-ps86 7 86185726 to 86186596 870 - pseudogene vomeronasal 2, receptor, pseudogene 86
Vmn2r76 7 86225206 to 86246201 20995 - protein coding gene vomeronasal 2, receptor 76
Olfr310 7 86268730 to 86269811 1081 - protein coding gene olfactory receptor 310
Gm20480 7 86298644 to 86298893 249 - pseudogene predicted gene 20480
Gm23192 7 86298665 to 86298760 95 - miRNA gene predicted gene, 23192
Olfr309 7 86306185 to 86307111 926 - protein coding gene olfactory receptor 309
Olfr308 7 86321024 to 86321950 926 - protein coding gene olfactory receptor 308
Olfr307 7 86335453 to 86336394 941 - protein coding gene olfactory receptor 307
Olfr306-ps1 7 86353060 to 86353719 659 - pseudogene olfactory receptor 306, pseudogene 1
Olfr305 7 86363376 to 86364335 959 - protein coding gene olfactory receptor 305
Olfr304 7 86385657 to 86386658 1001 - protein coding gene olfactory receptor 304
Olfr303 7 86394537 to 86395496 959 - protein coding gene olfactory receptor 303
Gm45541 7 86402766 to 86402819 53 - pseudogene predicted gene 45541
Olfr301 7 86403849 to 86413299 9450 + protein coding gene olfactory receptor 301
Olfr300-ps1 7 86442968 to 86443906 938 + polymorphic pseudogene olfactory receptor 300, pseudogene 1
Olfr299 7 86465413 to 86466405 992 + protein coding gene olfactory receptor 299
Olfr298 7 86488551 to 86489549 998 - protein coding gene olfactory receptor 298
Olfr297 7 86526759 to 86527691 932 + protein coding gene olfactory receptor 297
Gm17919 7 86541965 to 86542661 696 - pseudogene predicted gene, 17919
Olfr296-ps1 7 86561734 to 86562663 929 + polymorphic pseudogene olfactory receptor 296, pseudogene 1
Olfr295 7 86583903 to 86586206 2303 + protein coding gene olfactory receptor 295
Olfr294 7 86615636 to 86616643 1007 - protein coding gene olfactory receptor 294
Olfr293 7 86663664 to 86664674 1010 + protein coding gene olfactory receptor 293
Olfr292 7 86688341 to 86695384 7043 + protein coding gene olfactory receptor 292
Folh1 7 86718977 to 86775943 56966 - protein coding gene folate hydrolase 1
Tssr73454 7 86775576 to 86775587 11 - TSS region transcription start site region 73454
Tssr73455 7 86775759 to 86775776 17 - TSS region transcription start site region 73455
Tssr73456 7 86775792 to 86775806 14 - TSS region transcription start site region 73456
Tssr73457 7 86775809 to 86775839 30 - TSS region transcription start site region 73457
Tssr73458 7 86775860 to 86775872 12 - TSS region transcription start site region 73458
Tssr73459 7 86775939 to 86775948 9 - TSS region transcription start site region 73459
Tssr73460 7 86775953 to 86775962 9 - TSS region transcription start site region 73460
Tssr73461 7 86775968 to 86775978 10 - TSS region transcription start site region 73461
Vmn2r77 7 86795141 to 86812032 16891 + protein coding gene vomeronasal 2, receptor 77
Vmn2r-ps87 7 86884865 to 86885740 875 + pseudogene vomeronasal 2, receptor, pseudogene 87
Gm39047 7 86890298 to 86897738 7440 + lncRNA gene predicted gene, 39047
Gm19203 7 86906996 to 86907934 938 - pseudogene predicted gene, 19203
Vmn2r78 7 86915349 to 86955177 39828 + protein coding gene vomeronasal 2, receptor 78
Vmn2r79 7 86996465 to 87037968 41503 + protein coding gene vomeronasal 2, receptor 79
Gm44925 7 87118867 to 87120976 2109 + unclassified gene predicted gene 44925
Gm6230 7 87242106 to 87242885 779 - pseudogene predicted gene 6230
Nox4 7 87246405 to 87398710 152305 + protein coding gene NADPH oxidase 4
Cpgi19385 7 87246457 to 87246988 531 CpG island CpG island 19385
Tssr67600 7 87246656 to 87246661 5 + TSS region transcription start site region 67600
Tssr67601 7 87246687 to 87246692 5 + TSS region transcription start site region 67601
Tssr67602 7 87246708 to 87246719 11 + TSS region transcription start site region 67602
Tssr67603 7 87246788 to 87246807 19 + TSS region transcription start site region 67603
Tssr67604 7 87246819 to 87246832 13 + TSS region transcription start site region 67604
Tssr67605 7 87253358 to 87253376 18 + TSS region transcription start site region 67605
Tssr67606 7 87278888 to 87278892 4 + TSS region transcription start site region 67606
Tssr67607 7 87281482 to 87281487 5 + TSS region transcription start site region 67607
Tssr67608 7 87304249 to 87304263 14 + TSS region transcription start site region 67608
Tssr67609 7 87304269 to 87304287 18 + TSS region transcription start site region 67609
Tssr67610 7 87304288 to 87304305 17 + TSS region transcription start site region 67610
Alcp13 7 87424771 to 87493512 68741 QTL alcohol preference locus 13, female specific
Tyr 7 87424771 to 87493512 68741 - protein coding gene tyrosinase
Alcp11 7 87424771 to 87493512 68741 QTL alcohol preference locus 11, male specific
Lorp1 7 87424771 to 87493512 68741 QTL loss of righting due to propofol 1
Tlag1 7 87424771 to 87493512 68741 QTL T lymphoma attenuation gene 1
D0Nds35 7 87428752 to 87428902 150 DNA segment DNA segment, Nuffield Department of Surgery 35
D0Nds37 7 87429084 to 87429168 84 DNA segment DNA segment, Nuffield Department of Surgery 37
D7Mit216 7 87447195 to 87447372 177 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 216
Tssr73462 7 87493327 to 87493340 13 - TSS region transcription start site region 73462
Tssr73463 7 87493371 to 87493438 67 - TSS region transcription start site region 73463
chtl 7 87493929 to 97902584 10408655 heritable phenotypic marker chocolate-like
Bpq7 7 87493929 to 87494171 242 QTL blood pressure QTL 7
D7Mit31 7 87493929 to 87494171 242 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 31
Capsq3 7 119886157 to 87493929 -32392228 QTL capsaicin sensitivity related QTL 3