Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:83658517-84108570

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Il16 7 83642825 to 83745726 102901 - protein coding gene interleukin 16
Tssr67574 7 83658823 to 83658838 15 + TSS region transcription start site region 67574
Tssr2319 7 83659417 to 83659427 10 - TSS region transcription start site region 2319
2310044K18Rik 7 83659575 to 83660963 1388 + antisense lncRNA gene RIKEN cDNA 2310044K18 gene
Tssr67575 7 83660679 to 83660694 15 + TSS region transcription start site region 67575
Tssr73386 7 83661078 to 83661090 12 - TSS region transcription start site region 73386
Tssr73387 7 83697457 to 83697463 6 - TSS region transcription start site region 73387
Tssr73388 7 83697563 to 83697568 5 - TSS region transcription start site region 73388
Tssr73389 7 83706768 to 83706773 5 - TSS region transcription start site region 73389
Phgdh-ps1 7 83710966 to 83711719 753 - pseudogene 3-phosphoglycerate dehydrogenase, pseudogene 1
Cpgi19374 7 83722314 to 83722598 284 CpG island CpG island 19374
Tssr73390 7 83732346 to 83732357 11 - TSS region transcription start site region 73390
Tssr73391 7 83732401 to 83732437 36 - TSS region transcription start site region 73391
D7Mit261 7 83734030 to 83734134 104 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 261
Tssr73392 7 83735426 to 83735436 10 - TSS region transcription start site region 73392
Tssr73393 7 83735440 to 83735463 23 - TSS region transcription start site region 73393
Tssr73394 7 83735472 to 83735489 17 - TSS region transcription start site region 73394
Tssr73395 7 83735503 to 83735517 14 - TSS region transcription start site region 73395
Tssr73396 7 83735534 to 83735543 9 - TSS region transcription start site region 73396
Tssr73397 7 83744833 to 83744853 20 - TSS region transcription start site region 73397
Tssr73398 7 83745796 to 83745844 48 - TSS region transcription start site region 73398
Tssr73399 7 83746061 to 83746106 45 - TSS region transcription start site region 73399
Tssr67576 7 83755841 to 83755872 31 + TSS region transcription start site region 67576
Gm7964 7 83755904 to 83757281 1377 + pseudogene predicted gene 7964
Tssr67577 7 83755912 to 83755956 44 + TSS region transcription start site region 67577
Tssr67578 7 83756082 to 83756095 13 + TSS region transcription start site region 67578
Tssr67579 7 83756510 to 83756531 21 + TSS region transcription start site region 67579
Cfap161 7 83774101 to 83794880 20779 - protein coding gene cilia and flagella associated protein 161
Cpgi19375 7 83794725 to 83794898 173 CpG island CpG island 19375
Tssr73400 7 83794820 to 83794841 21 - TSS region transcription start site region 73400
Tssr73401 7 83794842 to 83794887 45 - TSS region transcription start site region 73401
Tssr67580 7 83799456 to 83799458 2 + TSS region transcription start site region 67580
Gm44993 7 83800422 to 83834599 34177 - lincRNA gene predicted gene 44993
Gm39043 7 83814707 to 83838345 23638 + lincRNA gene predicted gene, 39043
3110009M11Rik 7 83864590 to 83865481 891 - pseudogene RIKEN cDNA 3110009M11 gene
Gm44531 7 83866777 to 83868776 1999 + unclassified gene predicted gene 44531
Gm44530 7 83874362 to 83877920 3558 + unclassified gene predicted gene 44530
Tlnrd1 7 83880495 to 83884341 3846 - protein coding gene talin rod domain containing 1
Cpgi19376 7 83882210 to 83884821 2611 CpG island CpG island 19376
Tssr2320 7 83882218 to 83882220 2 + TSS region transcription start site region 2320
Tssr73402 7 83883454 to 83883470 16 - TSS region transcription start site region 73402
Tssr73403 7 83883517 to 83883570 53 - TSS region transcription start site region 73403
Tssr67581 7 83883622 to 83883645 23 + TSS region transcription start site region 67581
Tssr67582 7 83883647 to 83883668 21 + TSS region transcription start site region 67582
Tssr67583 7 83883724 to 83883740 16 + TSS region transcription start site region 67583
Tssr73404 7 83883798 to 83883830 32 - TSS region transcription start site region 73404
Tssr67584 7 83883857 to 83883881 24 + TSS region transcription start site region 67584
2310034P14Rik 7 83883953 to 83885194 1241 + protein coding gene RIKEN cDNA 2310034P14 gene
Tssr73405 7 83884154 to 83884170 16 - TSS region transcription start site region 73405
Tssr73406 7 83884213 to 83884253 40 - TSS region transcription start site region 73406
Tssr73407 7 83884262 to 83884286 24 - TSS region transcription start site region 73407
Tssr73408 7 83884289 to 83884315 26 - TSS region transcription start site region 73408
Tssr73409 7 83884324 to 83884336 12 - TSS region transcription start site region 73409
Cpgi19377 7 83891765 to 83892733 968 CpG island CpG island 19377
Tssr67585 7 83891983 to 83892033 50 + TSS region transcription start site region 67585
Mesd 7 83892000 to 83901532 9532 + protein coding gene mesoderm development LRP chaperone
Tssr67586 7 83892037 to 83892056 19 + TSS region transcription start site region 67586
Tssr67587 7 83892131 to 83892157 26 + TSS region transcription start site region 67587
Tssr67588 7 83892241 to 83892290 49 + TSS region transcription start site region 67588
Gm49493 7 83892262 to 83896397 4135 + unclassified gene predicted gene, 49493
Cemip 7 83932857 to 84086502 153645 - protein coding gene cell migration inducing protein, hyaluronan binding
Tssr73410 7 83933488 to 83933500 12 - TSS region transcription start site region 73410
Tssr73411 7 83937771 to 83937815 44 - TSS region transcription start site region 73411
Tssr67589 7 83964510 to 83964517 7 + TSS region transcription start site region 67589
Gm30440 7 83970181 to 84024735 54554 + lncRNA gene predicted gene, 30440
Tssr67590 7 83970261 to 83970276 15 + TSS region transcription start site region 67590
Tssr67591 7 83970287 to 83970305 18 + TSS region transcription start site region 67591
Tssr73412 7 83972422 to 83972428 6 - TSS region transcription start site region 73412
Tssr73413 7 83995316 to 83995320 4 - TSS region transcription start site region 73413
Tssr73414 7 84048146 to 84048152 6 - TSS region transcription start site region 73414
Tssr73415 7 84054322 to 84054326 4 - TSS region transcription start site region 73415
Tssr73416 7 84077563 to 84077565 2 - TSS region transcription start site region 73416
Cpgi19378 7 84085109 to 84086863 1754 CpG island CpG island 19378
Tssr73417 7 84086494 to 84086509 15 - TSS region transcription start site region 73417