Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:83026977-83799578

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbrs5 7 49509479 to 83586207 34076728 QTL tuberculosis resistance 5
Gm36817 7 83037378 to 83048173 10795 + lncRNA gene predicted gene, 36817
Stmm1d 7 83139778 to 83139778 0 QTL skin tumor modifier of MSM 1d
Stmm1a 7 83139778 to 83139778 0 QTL skin tumor modifier of MSM 1a
Stmm1b 7 83139778 to 83139778 0 QTL skin tumor modifier of MSM 1b
Stmm1c 7 83139778 to 83139778 0 QTL skin tumor modifier of MSM 1c
Tssr67564 7 83148390 to 83148401 11 + TSS region transcription start site region 67564
A530021J07Rik 7 83148463 to 83179432 30969 + lincRNA gene Riken cDNA A530021J07 gene
5930435M05Rik 7 83178570 to 83201586 23016 - lincRNA gene RIKEN cDNA 5930435M05 gene
Gm44845 7 83234541 to 83234875 334 + pseudogene predicted gene 44845
Gm44724 7 83327738 to 83369429 41691 - lincRNA gene predicted gene 44724
Gm29976 7 83341271 to 83383189 41918 - lncRNA gene predicted gene, 29976
Gm44723 7 83379142 to 83383141 3999 - unclassified gene predicted gene 44723
Tssr67565 7 83408931 to 83408936 5 + TSS region transcription start site region 67565
Gm7957 7 83411977 to 83414578 2601 + pseudogene predicted gene 7957
Gm44991 7 83471708 to 83485474 13766 + lincRNA gene predicted gene 44991
Tssr73378 7 83531728 to 83531731 3 - TSS region transcription start site region 73378
Gm10610 7 83536810 to 83550703 13893 - lincRNA gene predicted gene 10610
Tssr2318 7 83567897 to 83567901 4 + TSS region transcription start site region 2318
Tssr67566 7 83584910 to 83584942 32 + TSS region transcription start site region 67566
Tmc3 7 83584927 to 83625614 40687 + protein coding gene transmembrane channel-like gene family 3
D7Mit350 7 83586089 to 83586207 118 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 350
Gm16638 7 83597048 to 83631880 34832 - antisense lncRNA gene predicted gene, 16638
Tssr73379 7 83631802 to 83631819 17 - TSS region transcription start site region 73379
Cpgi19373 7 83631805 to 83632269 464 CpG island CpG island 19373
Tssr73380 7 83631823 to 83631852 29 - TSS region transcription start site region 73380
Tssr67567 7 83631964 to 83631969 5 + TSS region transcription start site region 67567
Tssr67568 7 83631974 to 83631981 7 + TSS region transcription start site region 67568
Tssr67569 7 83631987 to 83632022 35 + TSS region transcription start site region 67569
Stard5 7 83632017 to 83642328 10311 + protein coding gene StAR-related lipid transfer (START) domain containing 5
Tssr73381 7 83632472 to 83632475 3 - TSS region transcription start site region 73381
Gm45838 7 83633371 to 83635817 2446 + unclassified gene predicted gene 45838
Tssr67570 7 83641377 to 83641388 11 + TSS region transcription start site region 67570
Tssr67571 7 83641750 to 83641768 18 + TSS region transcription start site region 67571
Tssr67572 7 83641819 to 83641834 15 + TSS region transcription start site region 67572
Tssr73382 7 83642254 to 83642258 4 - TSS region transcription start site region 73382
Il16 7 83642825 to 83745726 102901 - protein coding gene interleukin 16
Tssr73383 7 83653338 to 83653342 4 - TSS region transcription start site region 73383
Tssr67573 7 83653858 to 83653880 22 + TSS region transcription start site region 67573
Tssr73384 7 83655313 to 83655432 119 - TSS region transcription start site region 73384
Tssr73385 7 83655491 to 83655498 7 - TSS region transcription start site region 73385
Tssr67574 7 83658823 to 83658838 15 + TSS region transcription start site region 67574
Tssr2319 7 83659417 to 83659427 10 - TSS region transcription start site region 2319
2310044K18Rik 7 83659575 to 83660963 1388 + antisense lncRNA gene RIKEN cDNA 2310044K18 gene
Tssr67575 7 83660679 to 83660694 15 + TSS region transcription start site region 67575
Tssr73386 7 83661078 to 83661090 12 - TSS region transcription start site region 73386
Tssr73387 7 83697457 to 83697463 6 - TSS region transcription start site region 73387
Tssr73388 7 83697563 to 83697568 5 - TSS region transcription start site region 73388
Tssr73389 7 83706768 to 83706773 5 - TSS region transcription start site region 73389
Phgdh-ps1 7 83710966 to 83711719 753 - pseudogene 3-phosphoglycerate dehydrogenase, pseudogene 1
Cpgi19374 7 83722314 to 83722598 284 CpG island CpG island 19374
Tssr73390 7 83732346 to 83732357 11 - TSS region transcription start site region 73390
Tssr73391 7 83732401 to 83732437 36 - TSS region transcription start site region 73391
D7Mit261 7 83734030 to 83734134 104 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 261
Tssr73392 7 83735426 to 83735436 10 - TSS region transcription start site region 73392
Tssr73393 7 83735440 to 83735463 23 - TSS region transcription start site region 73393
Tssr73394 7 83735472 to 83735489 17 - TSS region transcription start site region 73394
Tssr73395 7 83735503 to 83735517 14 - TSS region transcription start site region 73395
Tssr73396 7 83735534 to 83735543 9 - TSS region transcription start site region 73396
Tssr73397 7 83744833 to 83744853 20 - TSS region transcription start site region 73397
Tssr73398 7 83745796 to 83745844 48 - TSS region transcription start site region 73398
Tssr73399 7 83746061 to 83746106 45 - TSS region transcription start site region 73399
Tssr67576 7 83755841 to 83755872 31 + TSS region transcription start site region 67576
Gm7964 7 83755904 to 83757281 1377 + pseudogene predicted gene 7964
Tssr67577 7 83755912 to 83755956 44 + TSS region transcription start site region 67577
Tssr67578 7 83756082 to 83756095 13 + TSS region transcription start site region 67578
Tssr67579 7 83756510 to 83756531 21 + TSS region transcription start site region 67579
Cfap161 7 83774101 to 83794880 20779 - protein coding gene cilia and flagella associated protein 161
Cpgi19375 7 83794725 to 83794898 173 CpG island CpG island 19375
Tssr73400 7 83794820 to 83794841 21 - TSS region transcription start site region 73400
Tssr73401 7 83794842 to 83794887 45 - TSS region transcription start site region 73401
Tssr67580 7 83799456 to 83799458 2 + TSS region transcription start site region 67580