Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:82771589-83162217

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Efl1 7 82648614 to 82777852 129238 + protein coding gene elongation factor like GTPase 1
Cpgi19370 7 82771225 to 82772044 819 CpG island CpG island 19370
Tssr67553 7 82771620 to 82771625 5 + TSS region transcription start site region 67553
Tssr67554 7 82771641 to 82771679 38 + TSS region transcription start site region 67554
Tssr73374 7 82771680 to 82771716 36 - TSS region transcription start site region 73374
Tssr67555 7 82771768 to 82771803 35 + TSS region transcription start site region 67555
Tssr67556 7 82771874 to 82771904 30 + TSS region transcription start site region 67556
Tssr67557 7 82771925 to 82771955 30 + TSS region transcription start site region 67557
Tssr67558 7 82771960 to 82772011 51 + TSS region transcription start site region 67558
D7Dcr35 7 82786385 to 82786485 100 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 35
Gm29796 7 82810903 to 82823444 12541 + lncRNA gene predicted gene, 29796
1700010L04Rik 7 82851599 to 82859849 8250 + lincRNA gene RIKEN cDNA 1700010L04 gene
Gm36584 7 82852498 to 82867074 14576 - lincRNA gene predicted gene, 36584
Cpgi19371 7 82865662 to 82868196 2534 CpG island CpG island 19371
Tssr67559 7 82866330 to 82866369 39 + TSS region transcription start site region 67559
Tssr73375 7 82867077 to 82867084 7 - TSS region transcription start site region 73375
Tssr67560 7 82867206 to 82867217 11 + TSS region transcription start site region 67560
Tssr67561 7 82867304 to 82867313 9 + TSS region transcription start site region 67561
Tssr67562 7 82867327 to 82867357 30 + TSS region transcription start site region 67562
Mex3b 7 82867333 to 82871515 4182 + protein coding gene mex3 RNA binding family member B
Tssr67563 7 82867451 to 82867499 48 + TSS region transcription start site region 67563
Tssr2317 7 82867784 to 82867794 10 + TSS region transcription start site region 2317
Cpgi19372 7 82868463 to 82870349 1886 CpG island CpG island 19372
4933430H16Rik 7 82937936 to 82940688 2752 - lincRNA gene RIKEN cDNA 4933430H16 gene
Gm45992 7 82945390 to 82951317 5927 + lncRNA gene predicted gene, 45992
Gm6112 7 82966589 to 82967217 628 - pseudogene predicted gene 6112
Tssr73376 7 82971385 to 82971396 11 - TSS region transcription start site region 73376
Tssr73377 7 82971420 to 82971423 3 - TSS region transcription start site region 73377
Gm22934 7 82994835 to 82994966 131 + snoRNA gene predicted gene, 22934
Gm36817 7 83037378 to 83048173 10795 + lncRNA gene predicted gene, 36817
Stmm1d 7 83139778 to 83139778 0 QTL skin tumor modifier of MSM 1d
Stmm1c 7 83139778 to 83139778 0 QTL skin tumor modifier of MSM 1c
Stmm1b 7 83139778 to 83139778 0 QTL skin tumor modifier of MSM 1b
Stmm1a 7 83139778 to 83139778 0 QTL skin tumor modifier of MSM 1a
Tssr67564 7 83148390 to 83148401 11 + TSS region transcription start site region 67564
A530021J07Rik 7 83148463 to 83179432 30969 + lincRNA gene Riken cDNA A530021J07 gene