Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 7:81662953-81869490

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48 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Homer2 7 81600481 to 81706925 106444 - protein coding gene homer scaffolding protein 2
Gm26149 7 81669728 to 81669835 107 + snRNA gene predicted gene, 26149
Tssr73348 7 81688477 to 81688482 5 - TSS region transcription start site region 73348
Cpgi19358 7 81706248 to 81707768 1520 CpG island CpG island 19358
Tssr73349 7 81706857 to 81706869 12 - TSS region transcription start site region 73349
Tssr73350 7 81706890 to 81706901 11 - TSS region transcription start site region 73350
Tssr73351 7 81706905 to 81706964 59 - TSS region transcription start site region 73351
Tssr73352 7 81707082 to 81707098 16 - TSS region transcription start site region 73352
Gm32579 7 81708152 to 81716866 8714 - lncRNA gene predicted gene, 32579
Gm42400 7 81731461 to 81737634 6173 + lncRNA gene predicted gene, 42400
Gm18806 7 81742356 to 81744259 1903 + pseudogene predicted gene, 18806
Cpgi19359 7 81762298 to 81763868 1570 CpG island CpG island 19359
Tssr67511 7 81762927 to 81762943 16 + TSS region transcription start site region 67511
Tssr67512 7 81762947 to 81762997 50 + TSS region transcription start site region 67512
Ramac 7 81762953 to 81769490 6537 + protein coding gene RNA guanine-7 methyltransferase activating subunit
Tssr67513 7 81765931 to 81765936 5 + TSS region transcription start site region 67513
3110040N11Rik 7 81782182 to 81789478 7296 - protein coding gene RIKEN cDNA 3110040N11 gene
Cpgi19360 7 81788982 to 81789745 763 CpG island CpG island 19360
Tssr73353 7 81789426 to 81789490 64 - TSS region transcription start site region 73353
Gm45016 7 81789477 to 81794685 5208 + lncRNA gene predicted gene 45016
Gm45845 7 81789738 to 81790319 581 - unclassified gene predicted gene 45845
Btbd1 7 81792074 to 81829431 37357 - protein coding gene BTB (POZ) domain containing 1
Cpgi19361 7 81828609 to 81830150 1541 CpG island CpG island 19361
Tssr73354 7 81829443 to 81829514 71 - TSS region transcription start site region 73354
Gm32695 7 81835536 to 81849058 13522 + lncRNA gene predicted gene, 32695
Tssr67514 7 81835585 to 81835615 30 + TSS region transcription start site region 67514
Tssr67515 7 81843228 to 81843235 7 + TSS region transcription start site region 67515
Gm51491 7 81843435 to 81855351 11916 - lncRNA gene predicted gene, 51491
Gm10160 7 81855533 to 81855794 261 - protein coding gene predicted gene 10160
Cpgi19362 7 81858713 to 81859841 1128 CpG island CpG island 19362
Tm6sf1 7 81858718 to 81884079 25361 + protein coding gene transmembrane 6 superfamily member 1
Tssr67516 7 81858965 to 81858977 12 + TSS region transcription start site region 67516
Tssr67517 7 81858993 to 81859010 17 + TSS region transcription start site region 67517
Tssr67518 7 81859040 to 81859053 13 + TSS region transcription start site region 67518
Tssr67519 7 81859063 to 81859125 62 + TSS region transcription start site region 67519
Tssr67520 7 81859147 to 81859152 5 + TSS region transcription start site region 67520
Tssr67521 7 81859288 to 81859297 9 + TSS region transcription start site region 67521
Tssr67522 7 81859328 to 81859337 9 + TSS region transcription start site region 67522
Tssr2315 7 81859389 to 81859400 11 + TSS region transcription start site region 2315
Tssr67523 7 81859407 to 81859433 26 + TSS region transcription start site region 67523
Gm45014 7 81860293 to 81862527 2234 - lncRNA gene predicted gene 45014
Tssr73355 7 81862510 to 81862521 11 - TSS region transcription start site region 73355
Tssr73356 7 81862523 to 81862530 7 - TSS region transcription start site region 73356
Tssr67524 7 81862578 to 81862587 9 + TSS region transcription start site region 67524
Tssr67525 7 81862624 to 81862659 35 + TSS region transcription start site region 67525
Tssr67526 7 81862674 to 81862692 18 + TSS region transcription start site region 67526
Tssr73357 7 81863311 to 81863326 15 - TSS region transcription start site region 73357
Scvln10 7 126900000 to 81800000 -45100000 QTL sacral vertebrae length 2, 10 week