Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:81058804-81488622

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sle19 7 30333060 to 81485905 51152845 QTL systematic lupus erythematosus susceptibility 19
Alpk3 7 81057600 to 81105612 48012 + protein coding gene alpha-kinase 3
Platr32 7 81059113 to 81066307 7194 + sense intronic lncRNA gene pluripotency associated transcript 32
Cpgi19349 7 81077593 to 81077990 397 CpG island CpG island 19349
Tssr67486 7 81087178 to 81087201 23 + TSS region transcription start site region 67486
Tssr67487 7 81100729 to 81100738 9 + TSS region transcription start site region 67487
Tssr67488 7 81104939 to 81104942 3 + TSS region transcription start site region 67488
Tssr67489 7 81113260 to 81113272 12 + TSS region transcription start site region 67489
Tssr67490 7 81114799 to 81114808 9 + TSS region transcription start site region 67490
Slc28a1 7 81114799 to 81170416 55617 + protein coding gene solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
Tssr67491 7 81114816 to 81114847 31 + TSS region transcription start site region 67491
Tssr67492 7 81141850 to 81141864 14 + TSS region transcription start site region 67492
Tssr67493 7 81141904 to 81141921 17 + TSS region transcription start site region 67493
Ndufs6b 7 81161397 to 81161744 347 - pseudogene NADH:ubiquinone oxidoreductase subunit S6B
Tssr73320 7 81161744 to 81161755 11 - TSS region transcription start site region 73320
D7Dcr34 7 81168143 to 81168274 131 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 34
D7Mit163 7 81168158 to 81168298 140 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 163
Gm44968 7 81209728 to 81210787 1059 + lincRNA gene predicted gene 44968
1700023D08Rik 7 81212185 to 81213172 987 unclassified gene RIKEN cDNA 1700023D08 gene
Cpgi19350 7 81212218 to 81214473 2255 CpG island CpG island 19350
Tssr73321 7 81213125 to 81213160 35 - TSS region transcription start site region 73321
Tssr73322 7 81213201 to 81213213 12 - TSS region transcription start site region 73322
Tssr67494 7 81213258 to 81213284 26 + TSS region transcription start site region 67494
Tssr67495 7 81213287 to 81213322 35 + TSS region transcription start site region 67495
Tssr67496 7 81213323 to 81213342 19 + TSS region transcription start site region 67496
Tssr67497 7 81213345 to 81213359 14 + TSS region transcription start site region 67497
Tssr67498 7 81213494 to 81213496 2 + TSS region transcription start site region 67498
Tssr67499 7 81213567 to 81213632 65 + TSS region transcription start site region 67499
Tssr73323 7 81213651 to 81213671 20 - TSS region transcription start site region 73323
Tssr73324 7 81213675 to 81213680 5 - TSS region transcription start site region 73324
Tssr67500 7 81213751 to 81213763 12 + TSS region transcription start site region 67500
Tssr67501 7 81213777 to 81213876 99 + TSS region transcription start site region 67501
Pde8a 7 81213804 to 81333622 119818 + protein coding gene phosphodiesterase 8A
Tssr67502 7 81214045 to 81214066 21 + TSS region transcription start site region 67502
Tssr67503 7 81222061 to 81222064 3 + TSS region transcription start site region 67503
Gm7180 7 81222362 to 81222874 512 - pseudogene predicted pseudogene 7180
Tssr73325 7 81222870 to 81222884 14 - TSS region transcription start site region 73325
Tssr67504 7 81226442 to 81226446 4 + TSS region transcription start site region 67504
Tssr67505 7 81243145 to 81243149 4 + TSS region transcription start site region 67505
Tssr67506 7 81296547 to 81296555 8 + TSS region transcription start site region 67506
Tssr2314 7 81313894 to 81313897 3 + TSS region transcription start site region 2314
Rps17 7 81342733 to 81345234 2501 - protein coding gene ribosomal protein S17
Cpgi19351 7 81344409 to 81345483 1074 CpG island CpG island 19351
Tssr73326 7 81345100 to 81345111 11 - TSS region transcription start site region 73326
Tssr73327 7 81345161 to 81345179 18 - TSS region transcription start site region 73327
Tssr73328 7 81345189 to 81345237 48 - TSS region transcription start site region 73328
Tssr73329 7 81345275 to 81345331 56 - TSS region transcription start site region 73329
Cpeb1 7 81347026 to 81455465 108439 - protein coding gene cytoplasmic polyadenylation element binding protein 1
Tssr73330 7 81372420 to 81372458 38 - TSS region transcription start site region 73330
Tssr73331 7 81372468 to 81372506 38 - TSS region transcription start site region 73331
Gm18922 7 81388714 to 81389619 905 + pseudogene predicted gene, 18922
Rpl7a-ps9 7 81445920 to 81446696 776 + pseudogene ribosomal protein L7A, pseudogene 9
Cpgi19352 7 81453252 to 81455554 2302 CpG island CpG island 19352
Tssr73332 7 81454751 to 81454764 13 - TSS region transcription start site region 73332
Tssr73333 7 81455386 to 81455397 11 - TSS region transcription start site region 73333
Tssr73334 7 81455441 to 81455478 37 - TSS region transcription start site region 73334
Tssr73335 7 81455489 to 81455501 12 - TSS region transcription start site region 73335
Cpeb1os1 7 81455895 to 81458006 2111 + unclassified gene cytoplasmic polyadenylation element binding protein 1, opposite strand 1
Ap3b2 7 81460399 to 81493925 33526 - protein coding gene adaptor-related protein complex 3, beta 2 subunit
Cpgi19353 7 81476822 to 81477399 577 CpG island CpG island 19353
Aem2 7 81485676 to 81485905 229 QTL anti-erythrocyte autoantibody modifier 2
D7Mit30 7 81485676 to 81485905 229 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 30