Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:80779888-81209892

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Iqgap1 7 80711583 to 80815549 103966 - protein coding gene IQ motif containing GTPase activating protein 1
Tssr67463 7 80781554 to 80781563 9 + TSS region transcription start site region 67463
Tssr67464 7 80781584 to 80781592 8 + TSS region transcription start site region 67464
Tssr73299 7 80782183 to 80782195 12 - TSS region transcription start site region 73299
Cpgi19340 7 80782225 to 80782393 168 CpG island CpG island 19340
Tssr73300 7 80782285 to 80782301 16 - TSS region transcription start site region 73300
Tssr73301 7 80782305 to 80782322 17 - TSS region transcription start site region 73301
Tssr73302 7 80782325 to 80782335 10 - TSS region transcription start site region 73302
Tssr73303 7 80782910 to 80782916 6 - TSS region transcription start site region 73303
Tssr73304 7 80786850 to 80786864 14 - TSS region transcription start site region 73304
Cpgi19341 7 80802675 to 80803701 1026 CpG island CpG island 19341
Tssr67465 7 80802882 to 80802889 7 + TSS region transcription start site region 67465
Tssr73305 7 80802953 to 80802994 41 - TSS region transcription start site region 73305
Tssr73306 7 80803221 to 80803232 11 - TSS region transcription start site region 73306
Tssr73307 7 80803253 to 80803312 59 - TSS region transcription start site region 73307
Tssr67466 7 80803506 to 80803526 20 + TSS region transcription start site region 67466
Tssr73308 7 80815771 to 80815810 39 - TSS region transcription start site region 73308
Tssr73309 7 80815838 to 80815880 42 - TSS region transcription start site region 73309
Tssr73310 7 80826001 to 80826023 22 - TSS region transcription start site region 73310
Tssr67467 7 80830745 to 80830756 11 + TSS region transcription start site region 67467
Tssr67468 7 80830811 to 80830846 35 + TSS region transcription start site region 67468
Cpgi19342 7 80860834 to 80861464 630 CpG island CpG island 19342
Tssr67469 7 80860909 to 80860972 63 + TSS region transcription start site region 67469
Zscan2 7 80860920 to 80876537 15617 + protein coding gene zinc finger and SCAN domain containing 2
Tssr67470 7 80862229 to 80862243 14 + TSS region transcription start site region 67470
Cpgi19343 7 80875355 to 80876288 933 CpG island CpG island 19343
Wdr73 7 80890723 to 80901269 10546 - protein coding gene WD repeat domain 73
Gm32112 7 80893688 to 80894345 657 + lncRNA gene predicted gene, 32112
Cpgi19344 7 80901014 to 80901460 446 CpG island CpG island 19344
Tssr73311 7 80901226 to 80901243 17 - TSS region transcription start site region 73311
Nmb 7 80902227 to 80905076 2849 - protein coding gene neuromedin B
Cpgi19345 7 80904779 to 80905213 434 CpG island CpG island 19345
Tssr73312 7 80905012 to 80905026 14 - TSS region transcription start site region 73312
Tssr73313 7 80905060 to 80905081 21 - TSS region transcription start site region 73313
Gm16171 7 80907825 to 80908148 323 + pseudogene predicted gene 16171
Gm45718 7 80910373 to 80914166 3793 - unclassified gene predicted gene 45718
Sec11a 7 80915379 to 80947550 32171 - protein coding gene SEC11 homolog A, signal peptidase complex subunit
Tssr73314 7 80923267 to 80923274 7 - TSS region transcription start site region 73314
Tssr73315 7 80929454 to 80929458 4 - TSS region transcription start site region 73315
Cpgi19346 7 80947265 to 80948096 831 CpG island CpG island 19346
Tssr73316 7 80947499 to 80947579 80 - TSS region transcription start site region 73316
Tssr73317 7 80947736 to 80947764 28 - TSS region transcription start site region 73317
Tssr73318 7 80947765 to 80947777 12 - TSS region transcription start site region 73318
Gm32178 7 80956405 to 80981429 25024 - lncRNA gene predicted gene, 32178
Gm18782 7 80979893 to 80981291 1398 + pseudogene predicted gene, 18782
Gm44899 7 80980846 to 80993415 12569 - lincRNA gene predicted gene 44899
Cpgi19347 7 80992729 to 80994709 1980 CpG island CpG island 19347
Tssr67471 7 80993427 to 80993482 55 + TSS region transcription start site region 67471
Tssr73319 7 80993552 to 80993583 31 - TSS region transcription start site region 73319
Tssr67472 7 80993646 to 80993657 11 + TSS region transcription start site region 67472
Tssr67473 7 80993658 to 80993698 40 + TSS region transcription start site region 67473
Zfp592 7 80993684 to 81045162 51478 + protein coding gene zinc finger protein 592
Tssr67474 7 80993699 to 80993714 15 + TSS region transcription start site region 67474
Tssr67475 7 80994014 to 80994016 2 + TSS region transcription start site region 67475
Gm44967 7 80994683 to 80995313 630 + unclassified gene predicted gene 44967
Tssr67476 7 80994888 to 80994892 4 + TSS region transcription start site region 67476
Tssr67477 7 81004840 to 81004841 1 + TSS region transcription start site region 67477
Tssr67478 7 81004967 to 81004978 11 + TSS region transcription start site region 67478
Tssr67479 7 81005005 to 81005014 9 + TSS region transcription start site region 67479
Tssr67480 7 81005026 to 81005037 11 + TSS region transcription start site region 67480
Tssr67481 7 81005363 to 81005367 4 + TSS region transcription start site region 67481
Tssr67482 7 81023839 to 81023862 23 + TSS region transcription start site region 67482
Tssr67483 7 81031565 to 81031569 4 + TSS region transcription start site region 67483
Cpgi19348 7 81057545 to 81057811 266 CpG island CpG island 19348
Tssr67484 7 81057583 to 81057588 5 + TSS region transcription start site region 67484
Tssr67485 7 81057589 to 81057603 14 + TSS region transcription start site region 67485
Alpk3 7 81057600 to 81105612 48012 + protein coding gene alpha-kinase 3
Platr32 7 81059113 to 81066307 7194 + sense intronic lncRNA gene pluripotency associated transcript 32
Cpgi19349 7 81077593 to 81077990 397 CpG island CpG island 19349
Tssr67486 7 81087178 to 81087201 23 + TSS region transcription start site region 67486
Tssr67487 7 81100729 to 81100738 9 + TSS region transcription start site region 67487
Tssr67488 7 81104939 to 81104942 3 + TSS region transcription start site region 67488
Tssr67489 7 81113260 to 81113272 12 + TSS region transcription start site region 67489
Slc28a1 7 81114799 to 81170416 55617 + protein coding gene solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
Tssr67490 7 81114799 to 81114808 9 + TSS region transcription start site region 67490
Tssr67491 7 81114816 to 81114847 31 + TSS region transcription start site region 67491
Tssr67492 7 81141850 to 81141864 14 + TSS region transcription start site region 67492
Tssr67493 7 81141904 to 81141921 17 + TSS region transcription start site region 67493
Ndufs6b 7 81161397 to 81161744 347 - pseudogene NADH:ubiquinone oxidoreductase subunit S6B
Tssr73320 7 81161744 to 81161755 11 - TSS region transcription start site region 73320
D7Dcr34 7 81168143 to 81168274 131 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 34
D7Mit163 7 81168158 to 81168298 140 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 163
Gm44968 7 81209728 to 81210787 1059 + lincRNA gene predicted gene 44968