Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:80257777-80757781

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147 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hfhl1 7 57574300 to 80632588 23058288 QTL high-frequency hearing loss 1
Ttll13 7 80246376 to 80260821 14445 + protein coding gene tubulin tyrosine ligase-like family, member 13
Cpgi19327 7 80261058 to 80261845 787 CpG island CpG island 19327
Tssr67428 7 80261202 to 80261257 55 + TSS region transcription start site region 67428
Ngrn 7 80261215 to 80265374 4159 + protein coding gene neugrin, neurite outgrowth associated
Cpgi19328 7 80269566 to 80270129 563 CpG island CpG island 19328
Tssr67429 7 80269632 to 80269726 94 + TSS region transcription start site region 67429
Vps33b 7 80269632 to 80291579 21947 + protein coding gene vacuolar protein sorting 33B
Tssr2311 7 80285120 to 80285131 11 + TSS region transcription start site region 2311
Tssr67430 7 80289999 to 80290007 8 + TSS region transcription start site region 67430
Tssr67431 7 80291246 to 80291271 25 + TSS region transcription start site region 67431
Cpgi19329 7 80294146 to 80295122 976 CpG island CpG island 19329
Prc1 7 80294451 to 80316259 21808 + protein coding gene protein regulator of cytokinesis 1
Tssr67432 7 80294459 to 80294492 33 + TSS region transcription start site region 67432
Tssr67433 7 80294541 to 80294550 9 + TSS region transcription start site region 67433
Tssr67434 7 80294557 to 80294565 8 + TSS region transcription start site region 67434
Rccd1 7 80294591 to 80324696 30105 - protein coding gene RCC1 domain containing 1
6330403N20Rik 7 80297728 to 80299616 1888 - lincRNA gene RIKEN cDNA 6330403N20 gene
Cpgi19330 7 80323991 to 80324474 483 CpG island CpG island 19330
Tssr73212 7 80324099 to 80324112 13 - TSS region transcription start site region 73212
Tssr73213 7 80324115 to 80324137 22 - TSS region transcription start site region 73213
Tssr73214 7 80324418 to 80324458 40 - TSS region transcription start site region 73214
Unc45a 7 80325292 to 80341000 15708 - protein coding gene unc-45 myosin chaperone A
Cpgi19331 7 80339528 to 80340498 970 CpG island CpG island 19331
Tssr73215 7 80339990 to 80340010 20 - TSS region transcription start site region 73215
Tssr73216 7 80340139 to 80340150 11 - TSS region transcription start site region 73216
Tssr73217 7 80340152 to 80340210 58 - TSS region transcription start site region 73217
Tssr73218 7 80340214 to 80340231 17 - TSS region transcription start site region 73218
Cpgi19332 7 80342883 to 80343504 621 CpG island CpG island 19332
Hddc3 7 80343074 to 80346716 3642 + protein coding gene HD domain containing 3
Tssr67435 7 80343091 to 80343146 55 + TSS region transcription start site region 67435
Tssr67436 7 80343165 to 80343188 23 + TSS region transcription start site region 67436
Gm18310 7 80346880 to 80347389 509 - pseudogene predicted gene, 18310
Man2a2 7 80349097 to 80371375 22278 - protein coding gene mannosidase 2, alpha 2
Tssr73219 7 80349551 to 80349560 9 - TSS region transcription start site region 73219
Tssr73220 7 80368847 to 80368857 10 - TSS region transcription start site region 73220
Tssr73221 7 80368979 to 80368982 3 - TSS region transcription start site region 73221
Tssr67437 7 80370319 to 80370359 40 + TSS region transcription start site region 67437
Cpgi19333 7 80370412 to 80371811 1399 CpG island CpG island 19333
Tssr73222 7 80370783 to 80370790 7 - TSS region transcription start site region 73222
Tssr73223 7 80370815 to 80370828 13 - TSS region transcription start site region 73223
Tssr73224 7 80370843 to 80370869 26 - TSS region transcription start site region 73224
Tssr73225 7 80371197 to 80371368 171 - TSS region transcription start site region 73225
Tssr73226 7 80371405 to 80371416 11 - TSS region transcription start site region 73226
Tssr73227 7 80371481 to 80371494 13 - TSS region transcription start site region 73227
Tssr67438 7 80372451 to 80372455 4 + TSS region transcription start site region 67438
Fes 7 80377756 to 80387946 10190 - protein coding gene feline sarcoma oncogene
Tssr73228 7 80384539 to 80384543 4 - TSS region transcription start site region 73228
Tssr73229 7 80385557 to 80385622 65 - TSS region transcription start site region 73229
Tssr73230 7 80385673 to 80385684 11 - TSS region transcription start site region 73230
Cpgi19334 7 80386772 to 80387438 666 CpG island CpG island 19334
Tssr73231 7 80387171 to 80387205 34 - TSS region transcription start site region 73231
Tssr73232 7 80387364 to 80387381 17 - TSS region transcription start site region 73232
Tssr73233 7 80387383 to 80387394 11 - TSS region transcription start site region 73233
Tssr73234 7 80387408 to 80387426 18 - TSS region transcription start site region 73234
Tssr73235 7 80387871 to 80387901 30 - TSS region transcription start site region 73235
Tssr73236 7 80387904 to 80387922 18 - TSS region transcription start site region 73236
Cpgi19335 7 80387927 to 80388108 181 CpG island CpG island 19335
Tssr73237 7 80387935 to 80387953 18 - TSS region transcription start site region 73237
Tssr67439 7 80387996 to 80388018 22 + TSS region transcription start site region 67439
Tssr67440 7 80388024 to 80388055 31 + TSS region transcription start site region 67440
Tssr73238 7 80388719 to 80388730 11 - TSS region transcription start site region 73238
Furin 7 80389194 to 80405441 16247 - protein coding gene furin (paired basic amino acid cleaving enzyme)
Tssr73239 7 80389816 to 80389827 11 - TSS region transcription start site region 73239
Tssr73240 7 80389859 to 80389912 53 - TSS region transcription start site region 73240
Tssr73241 7 80391223 to 80391243 20 - TSS region transcription start site region 73241
Tssr73242 7 80391562 to 80391576 14 - TSS region transcription start site region 73242
Tssr73243 7 80396961 to 80396978 17 - TSS region transcription start site region 73243
Tssr73244 7 80398767 to 80398791 24 - TSS region transcription start site region 73244
Tssr73245 7 80398873 to 80398898 25 - TSS region transcription start site region 73245
Tssr67441 7 80400385 to 80400399 14 + TSS region transcription start site region 67441
D7Mit90 7 80401024 to 80401283 259 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 90
Tssr67442 7 80401281 to 80401298 17 + TSS region transcription start site region 67442
Tssr73246 7 80401461 to 80401473 12 - TSS region transcription start site region 73246
Tssr73247 7 80401490 to 80401507 17 - TSS region transcription start site region 73247
Tssr73248 7 80401749 to 80401754 5 - TSS region transcription start site region 73248
Cpgi19336 7 80401765 to 80403337 1572 CpG island CpG island 19336
Tssr73249 7 80402230 to 80402262 32 - TSS region transcription start site region 73249
Tssr73250 7 80402708 to 80402731 23 - TSS region transcription start site region 73250
Tssr73251 7 80402743 to 80402757 14 - TSS region transcription start site region 73251
Tssr73252 7 80402770 to 80402823 53 - TSS region transcription start site region 73252
Tssr73253 7 80403304 to 80403309 5 - TSS region transcription start site region 73253
Tssr73254 7 80403315 to 80403339 24 - TSS region transcription start site region 73254
Tssr73255 7 80403370 to 80403378 8 - TSS region transcription start site region 73255
Tssr73256 7 80404029 to 80404041 12 - TSS region transcription start site region 73256
Tssr73257 7 80404056 to 80404064 8 - TSS region transcription start site region 73257
Gm44851 7 80404269 to 80406577 2308 + antisense lncRNA gene predicted gene 44851
Tssr67443 7 80404438 to 80404445 7 + TSS region transcription start site region 67443
Tssr73258 7 80405425 to 80405433 8 - TSS region transcription start site region 73258
Tssr67444 7 80405531 to 80405541 10 + TSS region transcription start site region 67444
Tssr73259 7 80406310 to 80406321 11 - TSS region transcription start site region 73259
Tssr73260 7 80406339 to 80406353 14 - TSS region transcription start site region 73260
Tssr67445 7 80406562 to 80406573 11 + TSS region transcription start site region 67445
Tssr73261 7 80410209 to 80410215 6 - TSS region transcription start site region 73261
Tssr73262 7 80417762 to 80417782 20 - TSS region transcription start site region 73262
Tssr73263 7 80419390 to 80419401 11 - TSS region transcription start site region 73263
Tssr73264 7 80419417 to 80419429 12 - TSS region transcription start site region 73264
Tssr73265 7 80420008 to 80420021 13 - TSS region transcription start site region 73265
Tssr67446 7 80422990 to 80422993 3 + TSS region transcription start site region 67446
Gm15544 7 80429210 to 80430737 1527 + pseudogene predicted gene 15544
Blm 7 80454993 to 80535147 80154 - protein coding gene Bloom syndrome, RecQ like helicase
Tssr67447 7 80472425 to 80472437 12 + TSS region transcription start site region 67447
Tssr67448 7 80472449 to 80472464 15 + TSS region transcription start site region 67448
Tssr73266 7 80495287 to 80495299 12 - TSS region transcription start site region 73266
Tssr73267 7 80501004 to 80501023 19 - TSS region transcription start site region 73267
Tssr67449 7 80501177 to 80501185 8 + TSS region transcription start site region 67449
Tssr2312 7 80501208 to 80501215 7 + TSS region transcription start site region 2312
Tssr67450 7 80501234 to 80501239 5 + TSS region transcription start site region 67450
Tssr73268 7 80503347 to 80503365 18 - TSS region transcription start site region 73268
Tssr67451 7 80507777 to 80507781 4 + TSS region transcription start site region 67451
Ndufab1-ps 7 80507787 to 80508254 467 + pseudogene NADH:ubiquinone oxidoreductase subunit AB1b
Tssr73269 7 80522454 to 80522462 8 - TSS region transcription start site region 73269
Cpgi19337 7 80534519 to 80535487 968 CpG island CpG island 19337
Tssr73270 7 80535068 to 80535121 53 - TSS region transcription start site region 73270
Tssr73271 7 80535126 to 80535158 32 - TSS region transcription start site region 73271
Gm42398 7 80543160 to 80556074 12914 - lncRNA gene predicted gene, 42398
D7Mit260 7 80568749 to 80568876 127 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 260
Tssr67452 7 80583244 to 80583290 46 + TSS region transcription start site region 67452
Crtc3 7 80586627 to 80688877 102250 - protein coding gene CREB regulated transcription coactivator 3
Cpgi19338 7 80587364 to 80587668 304 CpG island CpG island 19338
Tssr73272 7 80598892 to 80598934 42 - TSS region transcription start site region 73272
Gm44931 7 80603239 to 80603783 544 - unclassified gene predicted gene 44931
D7Dmr1 7 80615571 to 80615764 193 DNA segment DNA segment, Chr 7, Diane M Robins 1
Tssr67453 7 80628924 to 80628937 13 + TSS region transcription start site region 67453
Gm15880 7 80636017 to 80644384 8367 + antisense lncRNA gene predicted gene 15880
Cpgi19339 7 80687762 to 80689630 1868 CpG island CpG island 19339
Tssr73273 7 80688852 to 80688923 71 - TSS region transcription start site region 73273
Iqgap1 7 80711583 to 80815549 103966 - protein coding gene IQ motif containing GTPase activating protein 1
Tssr73274 7 80712031 to 80712045 14 - TSS region transcription start site region 73274
Tssr73275 7 80712191 to 80712195 4 - TSS region transcription start site region 73275
Tssr73276 7 80712935 to 80712974 39 - TSS region transcription start site region 73276
Tssr73277 7 80713012 to 80713014 2 - TSS region transcription start site region 73277
Tssr73278 7 80713183 to 80713199 16 - TSS region transcription start site region 73278
Tssr73279 7 80713543 to 80713598 55 - TSS region transcription start site region 73279
Tssr73280 7 80719287 to 80719291 4 - TSS region transcription start site region 73280
Tssr73281 7 80720898 to 80720909 11 - TSS region transcription start site region 73281
Tssr73282 7 80720988 to 80720996 8 - TSS region transcription start site region 73282
Tssr73283 7 80723938 to 80723965 27 - TSS region transcription start site region 73283
Tssr73284 7 80726759 to 80726780 21 - TSS region transcription start site region 73284
Tssr73285 7 80728898 to 80728913 15 - TSS region transcription start site region 73285
Tssr73286 7 80743125 to 80743149 24 - TSS region transcription start site region 73286
Tssr73287 7 80748868 to 80748895 27 - TSS region transcription start site region 73287
Tssr73288 7 80751699 to 80751737 38 - TSS region transcription start site region 73288
Gm44649 7 80751822 to 80758612 6790 + antisense lncRNA gene predicted gene 44649
Tssr2313 7 80751840 to 80751847 7 + TSS region transcription start site region 2313
Tssr73289 7 80752018 to 80752039 21 - TSS region transcription start site region 73289
Gm18392 7 80753446 to 80754087 641 + pseudogene predicted gene, 18392