Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:80214451-80396259

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84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sema4b 7 80186841 to 80226527 39686 + protein coding gene sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
Tssr67420 7 80220953 to 80220957 4 + TSS region transcription start site region 67420
Cib1 7 80227156 to 80232805 5649 - protein coding gene calcium and integrin binding 1 (calmyrin)
Cpgi19325 7 80232140 to 80233169 1029 CpG island CpG island 19325
Tssr73209 7 80232479 to 80232498 19 - TSS region transcription start site region 73209
Tssr73210 7 80232556 to 80232633 77 - TSS region transcription start site region 73210
Tssr73211 7 80232752 to 80232842 90 - TSS region transcription start site region 73211
Tssr67421 7 80232862 to 80232945 83 + TSS region transcription start site region 67421
Gdpgp1 7 80232893 to 80241420 8527 + protein coding gene GDP-D-glucose phosphorylase 1
Gm15504 7 80237680 to 80237944 264 - pseudogene predicted gene 15504
Cpgi19326 7 80246114 to 80246805 691 CpG island CpG island 19326
Tssr2310 7 80246359 to 80246364 5 + TSS region transcription start site region 2310
Tssr67422 7 80246369 to 80246371 2 + TSS region transcription start site region 67422
Tssr67423 7 80246375 to 80246429 54 + TSS region transcription start site region 67423
Ttll13 7 80246376 to 80260821 14445 + protein coding gene tubulin tyrosine ligase-like family, member 13
Tssr67424 7 80246430 to 80246434 4 + TSS region transcription start site region 67424
Tssr67425 7 80246447 to 80246456 9 + TSS region transcription start site region 67425
Tssr67426 7 80246506 to 80246520 14 + TSS region transcription start site region 67426
Tssr67427 7 80246529 to 80246579 50 + TSS region transcription start site region 67427
Cpgi19327 7 80261058 to 80261845 787 CpG island CpG island 19327
Tssr67428 7 80261202 to 80261257 55 + TSS region transcription start site region 67428
Ngrn 7 80261215 to 80265374 4159 + protein coding gene neugrin, neurite outgrowth associated
Cpgi19328 7 80269566 to 80270129 563 CpG island CpG island 19328
Tssr67429 7 80269632 to 80269726 94 + TSS region transcription start site region 67429
Vps33b 7 80269632 to 80291579 21947 + protein coding gene vacuolar protein sorting 33B
Tssr2311 7 80285120 to 80285131 11 + TSS region transcription start site region 2311
Tssr67430 7 80289999 to 80290007 8 + TSS region transcription start site region 67430
Tssr67431 7 80291246 to 80291271 25 + TSS region transcription start site region 67431
Cpgi19329 7 80294146 to 80295122 976 CpG island CpG island 19329
Prc1 7 80294451 to 80316259 21808 + protein coding gene protein regulator of cytokinesis 1
Tssr67432 7 80294459 to 80294492 33 + TSS region transcription start site region 67432
Tssr67433 7 80294541 to 80294550 9 + TSS region transcription start site region 67433
Tssr67434 7 80294557 to 80294565 8 + TSS region transcription start site region 67434
Rccd1 7 80294591 to 80324696 30105 - protein coding gene RCC1 domain containing 1
6330403N20Rik 7 80297728 to 80299616 1888 - lincRNA gene RIKEN cDNA 6330403N20 gene
Cpgi19330 7 80323991 to 80324474 483 CpG island CpG island 19330
Tssr73212 7 80324099 to 80324112 13 - TSS region transcription start site region 73212
Tssr73213 7 80324115 to 80324137 22 - TSS region transcription start site region 73213
Tssr73214 7 80324418 to 80324458 40 - TSS region transcription start site region 73214
Unc45a 7 80325292 to 80341000 15708 - protein coding gene unc-45 myosin chaperone A
Cpgi19331 7 80339528 to 80340498 970 CpG island CpG island 19331
Tssr73215 7 80339990 to 80340010 20 - TSS region transcription start site region 73215
Tssr73216 7 80340139 to 80340150 11 - TSS region transcription start site region 73216
Tssr73217 7 80340152 to 80340210 58 - TSS region transcription start site region 73217
Tssr73218 7 80340214 to 80340231 17 - TSS region transcription start site region 73218
Cpgi19332 7 80342883 to 80343504 621 CpG island CpG island 19332
Hddc3 7 80343074 to 80346716 3642 + protein coding gene HD domain containing 3
Tssr67435 7 80343091 to 80343146 55 + TSS region transcription start site region 67435
Tssr67436 7 80343165 to 80343188 23 + TSS region transcription start site region 67436
Gm18310 7 80346880 to 80347389 509 - pseudogene predicted gene, 18310
Man2a2 7 80349097 to 80371375 22278 - protein coding gene mannosidase 2, alpha 2
Tssr73219 7 80349551 to 80349560 9 - TSS region transcription start site region 73219
Tssr73220 7 80368847 to 80368857 10 - TSS region transcription start site region 73220
Tssr73221 7 80368979 to 80368982 3 - TSS region transcription start site region 73221
Tssr67437 7 80370319 to 80370359 40 + TSS region transcription start site region 67437
Cpgi19333 7 80370412 to 80371811 1399 CpG island CpG island 19333
Tssr73222 7 80370783 to 80370790 7 - TSS region transcription start site region 73222
Tssr73223 7 80370815 to 80370828 13 - TSS region transcription start site region 73223
Tssr73224 7 80370843 to 80370869 26 - TSS region transcription start site region 73224
Tssr73225 7 80371197 to 80371368 171 - TSS region transcription start site region 73225
Tssr73226 7 80371405 to 80371416 11 - TSS region transcription start site region 73226
Tssr73227 7 80371481 to 80371494 13 - TSS region transcription start site region 73227
Tssr67438 7 80372451 to 80372455 4 + TSS region transcription start site region 67438
Fes 7 80377756 to 80387946 10190 - protein coding gene feline sarcoma oncogene
Tssr73228 7 80384539 to 80384543 4 - TSS region transcription start site region 73228
Tssr73229 7 80385557 to 80385622 65 - TSS region transcription start site region 73229
Tssr73230 7 80385673 to 80385684 11 - TSS region transcription start site region 73230
Cpgi19334 7 80386772 to 80387438 666 CpG island CpG island 19334
Tssr73231 7 80387171 to 80387205 34 - TSS region transcription start site region 73231
Tssr73232 7 80387364 to 80387381 17 - TSS region transcription start site region 73232
Tssr73233 7 80387383 to 80387394 11 - TSS region transcription start site region 73233
Tssr73234 7 80387408 to 80387426 18 - TSS region transcription start site region 73234
Tssr73235 7 80387871 to 80387901 30 - TSS region transcription start site region 73235
Tssr73236 7 80387904 to 80387922 18 - TSS region transcription start site region 73236
Cpgi19335 7 80387927 to 80388108 181 CpG island CpG island 19335
Tssr73237 7 80387935 to 80387953 18 - TSS region transcription start site region 73237
Tssr67439 7 80387996 to 80388018 22 + TSS region transcription start site region 67439
Tssr67440 7 80388024 to 80388055 31 + TSS region transcription start site region 67440
Tssr73238 7 80388719 to 80388730 11 - TSS region transcription start site region 73238
Furin 7 80389194 to 80405441 16247 - protein coding gene furin (paired basic amino acid cleaving enzyme)
Tssr73239 7 80389816 to 80389827 11 - TSS region transcription start site region 73239
Tssr73240 7 80389859 to 80389912 53 - TSS region transcription start site region 73240
Tssr73241 7 80391223 to 80391243 20 - TSS region transcription start site region 73241
Tssr73242 7 80391562 to 80391576 14 - TSS region transcription start site region 73242