Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:80076698-80296731

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp710 7 80024814 to 80092751 67937 + protein coding gene zinc finger protein 710
Tssr67406 7 80081939 to 80081953 14 + TSS region transcription start site region 67406
Tssr67407 7 80082310 to 80082331 21 + TSS region transcription start site region 67407
Tssr67408 7 80082370 to 80082387 17 + TSS region transcription start site region 67408
Gm44949 7 80088982 to 80090431 1449 - antisense lncRNA gene predicted gene 44949
Tssr67409 7 80090591 to 80090618 27 + TSS region transcription start site region 67409
Tssr67410 7 80091330 to 80091343 13 + TSS region transcription start site region 67410
Tssr67411 7 80091674 to 80091684 10 + TSS region transcription start site region 67411
Idh2 7 80094846 to 80115392 20546 - protein coding gene isocitrate dehydrogenase 2 (NADP+), mitochondrial
Tssr73204 7 80096576 to 80096591 15 - TSS region transcription start site region 73204
Tssr73205 7 80099091 to 80099102 11 - TSS region transcription start site region 73205
Gm45203 7 80110804 to 80112634 1830 - unclassified gene predicted gene 45203
Tssr73206 7 80113970 to 80114009 39 - TSS region transcription start site region 73206
Cpgi19322 7 80114458 to 80115791 1333 CpG island CpG island 19322
Tssr73207 7 80115294 to 80115355 61 - TSS region transcription start site region 73207
Tssr73208 7 80130408 to 80130422 14 - TSS region transcription start site region 73208
Tssr67412 7 80153245 to 80153250 5 + TSS region transcription start site region 67412
Gm45202 7 80155169 to 80156771 1602 + lincRNA gene predicted gene 45202
D7Mit200 7 80166556 to 80166705 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 200
Tssr67413 7 80186297 to 80186326 29 + TSS region transcription start site region 67413
Cpgi19323 7 80186334 to 80187312 978 CpG island CpG island 19323
Tssr67414 7 80186698 to 80186731 33 + TSS region transcription start site region 67414
Tssr67415 7 80186835 to 80186904 69 + TSS region transcription start site region 67415
Sema4b 7 80186841 to 80226527 39686 + protein coding gene sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
Tssr67416 7 80186909 to 80186932 23 + TSS region transcription start site region 67416
Cpgi19324 7 80197998 to 80199200 1202 CpG island CpG island 19324
Tssr67417 7 80198390 to 80198458 68 + TSS region transcription start site region 67417
Tssr67418 7 80198564 to 80198628 64 + TSS region transcription start site region 67418
Gm45206 7 80209394 to 80211678 2284 + unclassified gene predicted gene 45206
Tssr67419 7 80213940 to 80213957 17 + TSS region transcription start site region 67419
Tssr67420 7 80220953 to 80220957 4 + TSS region transcription start site region 67420
Cib1 7 80227156 to 80232805 5649 - protein coding gene calcium and integrin binding 1 (calmyrin)
Cpgi19325 7 80232140 to 80233169 1029 CpG island CpG island 19325
Tssr73209 7 80232479 to 80232498 19 - TSS region transcription start site region 73209
Tssr73210 7 80232556 to 80232633 77 - TSS region transcription start site region 73210
Tssr73211 7 80232752 to 80232842 90 - TSS region transcription start site region 73211
Tssr67421 7 80232862 to 80232945 83 + TSS region transcription start site region 67421
Gdpgp1 7 80232893 to 80241420 8527 + protein coding gene GDP-D-glucose phosphorylase 1
Gm15504 7 80237680 to 80237944 264 - pseudogene predicted gene 15504
Cpgi19326 7 80246114 to 80246805 691 CpG island CpG island 19326
Tssr2310 7 80246359 to 80246364 5 + TSS region transcription start site region 2310
Tssr67422 7 80246369 to 80246371 2 + TSS region transcription start site region 67422
Tssr67423 7 80246375 to 80246429 54 + TSS region transcription start site region 67423
Ttll13 7 80246376 to 80260821 14445 + protein coding gene tubulin tyrosine ligase-like family, member 13
Tssr67424 7 80246430 to 80246434 4 + TSS region transcription start site region 67424
Tssr67425 7 80246447 to 80246456 9 + TSS region transcription start site region 67425
Tssr67426 7 80246506 to 80246520 14 + TSS region transcription start site region 67426
Tssr67427 7 80246529 to 80246579 50 + TSS region transcription start site region 67427
Cpgi19327 7 80261058 to 80261845 787 CpG island CpG island 19327
Tssr67428 7 80261202 to 80261257 55 + TSS region transcription start site region 67428
Ngrn 7 80261215 to 80265374 4159 + protein coding gene neugrin, neurite outgrowth associated
Cpgi19328 7 80269566 to 80270129 563 CpG island CpG island 19328
Vps33b 7 80269632 to 80291579 21947 + protein coding gene vacuolar protein sorting 33B
Tssr67429 7 80269632 to 80269726 94 + TSS region transcription start site region 67429
Tssr2311 7 80285120 to 80285131 11 + TSS region transcription start site region 2311
Tssr67430 7 80289999 to 80290007 8 + TSS region transcription start site region 67430
Tssr67431 7 80291246 to 80291271 25 + TSS region transcription start site region 67431
Cpgi19329 7 80294146 to 80295122 976 CpG island CpG island 19329
Prc1 7 80294451 to 80316259 21808 + protein coding gene protein regulator of cytokinesis 1
Tssr67432 7 80294459 to 80294492 33 + TSS region transcription start site region 67432
Tssr67433 7 80294541 to 80294550 9 + TSS region transcription start site region 67433
Tssr67434 7 80294557 to 80294565 8 + TSS region transcription start site region 67434
Rccd1 7 80294591 to 80324696 30105 - protein coding gene RCC1 domain containing 1