Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:79864827-80184841

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr67377 7 79869382 to 79869387 5 + TSS region transcription start site region 67377
Tssr67378 7 79869626 to 79869643 17 + TSS region transcription start site region 67378
Ap3s2 7 79875325 to 79920640 45315 - protein coding gene adaptor-related protein complex 3, sigma 2 subunit
Tssr73190 7 79878304 to 79878318 14 - TSS region transcription start site region 73190
Tssr73191 7 79880043 to 79880068 25 - TSS region transcription start site region 73191
Tssr73192 7 79880267 to 79880298 31 - TSS region transcription start site region 73192
Tssr73193 7 79884611 to 79884614 3 - TSS region transcription start site region 73193
Tssr2309 7 79891101 to 79891105 4 + TSS region transcription start site region 2309
Gm26646 7 79916937 to 79920641 3704 + antisense lncRNA gene predicted gene, 26646
Cpgi19318 7 79920396 to 79920937 541 CpG island CpG island 19318
Tssr73194 7 79920599 to 79920658 59 - TSS region transcription start site region 73194
5430400D12Rik 7 79920723 to 79922521 1798 + bidirectional promoter lncRNA gene RIKEN cDNA 5430400D12 gene
Gm44950 7 79922572 to 79924867 2295 - unclassified gene predicted gene 44950
Tssr73195 7 79924844 to 79924847 3 - TSS region transcription start site region 73195
Arpin 7 79925359 to 79935264 9905 - protein coding gene actin-related protein 2/3 complex inhibitor
Cpgi19319 7 79935009 to 79935395 386 CpG island CpG island 19319
Tssr73196 7 79935241 to 79935255 14 - TSS region transcription start site region 73196
Tssr73197 7 79935258 to 79935371 113 - TSS region transcription start site region 73197
Gm31966 7 79935518 to 79939014 3496 + lncRNA gene predicted gene, 31966
Gm24541 7 79949187 to 79949282 95 + miRNA gene predicted gene, 24541
Tssr67379 7 80010920 to 80010958 38 + TSS region transcription start site region 67379
Tssr67380 7 80014214 to 80014217 3 + TSS region transcription start site region 67380
Tssr73198 7 80014956 to 80014992 36 - TSS region transcription start site region 73198
Cpgi19320 7 80024588 to 80025553 965 CpG island CpG island 19320
Zfp710 7 80024814 to 80092751 67937 + protein coding gene zinc finger protein 710
Tssr67381 7 80024827 to 80024841 14 + TSS region transcription start site region 67381
Tssr67382 7 80024847 to 80024883 36 + TSS region transcription start site region 67382
Tssr67383 7 80024891 to 80024907 16 + TSS region transcription start site region 67383
Tssr73199 7 80025113 to 80025135 22 - TSS region transcription start site region 73199
Tssr67384 7 80025273 to 80025284 11 + TSS region transcription start site region 67384
Tssr67385 7 80025301 to 80025320 19 + TSS region transcription start site region 67385
Tssr67386 7 80025813 to 80025829 16 + TSS region transcription start site region 67386
Tssr67387 7 80025906 to 80025921 15 + TSS region transcription start site region 67387
Tssr67388 7 80025933 to 80025950 17 + TSS region transcription start site region 67388
Tssr67389 7 80025993 to 80026028 35 + TSS region transcription start site region 67389
Cpgi19321 7 80026119 to 80027890 1771 CpG island CpG island 19321
Tssr67390 7 80026161 to 80026192 31 + TSS region transcription start site region 67390
Tssr67391 7 80026195 to 80026215 20 + TSS region transcription start site region 67391
Tssr67392 7 80026347 to 80026369 22 + TSS region transcription start site region 67392
Tssr67393 7 80026370 to 80026394 24 + TSS region transcription start site region 67393
Tssr67394 7 80026632 to 80026658 26 + TSS region transcription start site region 67394
Tssr67395 7 80027114 to 80027147 33 + TSS region transcription start site region 67395
Tssr67396 7 80027150 to 80027196 46 + TSS region transcription start site region 67396
Tssr67397 7 80027485 to 80027507 22 + TSS region transcription start site region 67397
Tssr67398 7 80027606 to 80027610 4 + TSS region transcription start site region 67398
Tssr67399 7 80028369 to 80028374 5 + TSS region transcription start site region 67399
Tssr67400 7 80029910 to 80029927 17 + TSS region transcription start site region 67400
Tssr67401 7 80030744 to 80030753 9 + TSS region transcription start site region 67401
Tssr67402 7 80030758 to 80030774 16 + TSS region transcription start site region 67402
D7Mit162 7 80031574 to 80031700 126 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 162
Gm44951 7 80036705 to 80038728 2023 + unclassified gene predicted gene 44951
Tssr67403 7 80038331 to 80038342 11 + TSS region transcription start site region 67403
Tssr67404 7 80040043 to 80040057 14 + TSS region transcription start site region 67404
Tssr67405 7 80040239 to 80040261 22 + TSS region transcription start site region 67405
Tssr73200 7 80056182 to 80056196 14 - TSS region transcription start site region 73200
Gm21057 7 80062710 to 80075257 12547 - antisense lncRNA gene predicted gene, 21057
Tssr73201 7 80066256 to 80066260 4 - TSS region transcription start site region 73201
Tssr73202 7 80074874 to 80074887 13 - TSS region transcription start site region 73202
Tssr73203 7 80075265 to 80075268 3 - TSS region transcription start site region 73203
Tssr67406 7 80081939 to 80081953 14 + TSS region transcription start site region 67406
Tssr67407 7 80082310 to 80082331 21 + TSS region transcription start site region 67407
Tssr67408 7 80082370 to 80082387 17 + TSS region transcription start site region 67408
Gm44949 7 80088982 to 80090431 1449 - antisense lncRNA gene predicted gene 44949
Tssr67409 7 80090591 to 80090618 27 + TSS region transcription start site region 67409
Tssr67410 7 80091330 to 80091343 13 + TSS region transcription start site region 67410
Tssr67411 7 80091674 to 80091684 10 + TSS region transcription start site region 67411
Idh2 7 80094846 to 80115392 20546 - protein coding gene isocitrate dehydrogenase 2 (NADP+), mitochondrial
Tssr73204 7 80096576 to 80096591 15 - TSS region transcription start site region 73204
Tssr73205 7 80099091 to 80099102 11 - TSS region transcription start site region 73205
Gm45203 7 80110804 to 80112634 1830 - unclassified gene predicted gene 45203
Tssr73206 7 80113970 to 80114009 39 - TSS region transcription start site region 73206
Cpgi19322 7 80114458 to 80115791 1333 CpG island CpG island 19322
Tssr73207 7 80115294 to 80115355 61 - TSS region transcription start site region 73207
Tssr73208 7 80130408 to 80130422 14 - TSS region transcription start site region 73208
Tssr67412 7 80153245 to 80153250 5 + TSS region transcription start site region 67412
Gm45202 7 80155169 to 80156771 1602 + lincRNA gene predicted gene 45202
D7Mit200 7 80166556 to 80166705 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 200