Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:79801375-80691429

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303 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hfhl1 7 57574300 to 80632588 23058288 QTL high-frequency hearing loss 1
Tssr73134 7 79801539 to 79801553 14 - TSS region transcription start site region 73134
Cpgi19316 7 79810594 to 79811725 1131 CpG island CpG island 19316
Mesp2 7 79810727 to 79813431 2704 + protein coding gene mesoderm posterior 2
Tssr67368 7 79811200 to 79811215 15 + TSS region transcription start site region 67368
Tssr67369 7 79811221 to 79811266 45 + TSS region transcription start site region 67369
Tssr67370 7 79821801 to 79821811 10 + TSS region transcription start site region 67370
Anpep 7 79821803 to 79848189 26386 - protein coding gene alanyl (membrane) aminopeptidase
Tssr73135 7 79822150 to 79822162 12 - TSS region transcription start site region 73135
Tssr73136 7 79822171 to 79822195 24 - TSS region transcription start site region 73136
Tssr73137 7 79822308 to 79822346 38 - TSS region transcription start site region 73137
Tssr73138 7 79822348 to 79822366 18 - TSS region transcription start site region 73138
Tssr73139 7 79825335 to 79825347 12 - TSS region transcription start site region 73139
Tssr73140 7 79825734 to 79825747 13 - TSS region transcription start site region 73140
Tssr2308 7 79825793 to 79825853 60 - TSS region transcription start site region 2308
Tssr73141 7 79826908 to 79826927 19 - TSS region transcription start site region 73141
Tssr73142 7 79827593 to 79827604 11 - TSS region transcription start site region 73142
Tssr73143 7 79827632 to 79827655 23 - TSS region transcription start site region 73143
Gm44974 7 79830593 to 79831871 1278 - unclassified gene predicted gene 44974
Tssr73144 7 79835405 to 79835416 11 - TSS region transcription start site region 73144
Tssr73145 7 79836250 to 79836262 12 - TSS region transcription start site region 73145
Tssr73146 7 79836288 to 79836301 13 - TSS region transcription start site region 73146
Tssr73147 7 79836318 to 79836335 17 - TSS region transcription start site region 73147
Tssr73148 7 79836342 to 79836353 11 - TSS region transcription start site region 73148
Tssr73149 7 79836360 to 79836389 29 - TSS region transcription start site region 73149
Tssr73150 7 79836397 to 79836408 11 - TSS region transcription start site region 73150
Tssr73151 7 79837659 to 79837666 7 - TSS region transcription start site region 73151
Tssr73152 7 79837693 to 79837710 17 - TSS region transcription start site region 73152
Tssr73153 7 79838294 to 79838320 26 - TSS region transcription start site region 73153
Tssr73154 7 79838468 to 79838482 14 - TSS region transcription start site region 73154
Tssr73155 7 79838682 to 79838692 10 - TSS region transcription start site region 73155
Tssr73156 7 79838725 to 79838756 31 - TSS region transcription start site region 73156
Tssr73157 7 79838936 to 79838954 18 - TSS region transcription start site region 73157
Tssr73158 7 79839190 to 79839204 14 - TSS region transcription start site region 73158
Tssr73159 7 79839227 to 79839254 27 - TSS region transcription start site region 73159
Tssr73160 7 79839453 to 79839498 45 - TSS region transcription start site region 73160
Tssr73161 7 79840903 to 79840917 14 - TSS region transcription start site region 73161
Tssr73162 7 79840920 to 79840975 55 - TSS region transcription start site region 73162
Tssr73163 7 79840979 to 79840996 17 - TSS region transcription start site region 73163
Tssr73164 7 79841124 to 79841159 35 - TSS region transcription start site region 73164
Tssr73165 7 79841685 to 79841705 20 - TSS region transcription start site region 73165
Tssr73166 7 79841726 to 79841737 11 - TSS region transcription start site region 73166
Tssr67371 7 79841829 to 79841839 10 + TSS region transcription start site region 67371
Tssr73167 7 79841934 to 79841939 5 - TSS region transcription start site region 73167
Tssr73168 7 79841946 to 79841960 14 - TSS region transcription start site region 73168
Tssr73169 7 79841974 to 79841997 23 - TSS region transcription start site region 73169
Tssr73170 7 79842005 to 79842016 11 - TSS region transcription start site region 73170
Tssr67372 7 79842017 to 79842090 73 + TSS region transcription start site region 67372
Tssr73171 7 79842076 to 79842101 25 - TSS region transcription start site region 73171
Tssr73172 7 79842104 to 79842113 9 - TSS region transcription start site region 73172
Tssr73173 7 79842120 to 79842131 11 - TSS region transcription start site region 73173
Tssr73174 7 79842208 to 79842217 9 - TSS region transcription start site region 73174
Tssr73175 7 79842229 to 79842245 16 - TSS region transcription start site region 73175
Tssr73176 7 79842287 to 79842302 15 - TSS region transcription start site region 73176
Tssr73177 7 79842317 to 79842328 11 - TSS region transcription start site region 73177
Tssr73178 7 79842343 to 79842354 11 - TSS region transcription start site region 73178
Tssr73179 7 79842407 to 79842419 12 - TSS region transcription start site region 73179
Tssr73180 7 79842474 to 79842509 35 - TSS region transcription start site region 73180
Tssr67373 7 79842477 to 79842509 32 + TSS region transcription start site region 67373
Tssr67374 7 79842523 to 79842549 26 + TSS region transcription start site region 67374
Tssr67375 7 79842557 to 79842585 28 + TSS region transcription start site region 67375
Tssr73181 7 79842557 to 79842575 18 - TSS region transcription start site region 73181
Tssr73182 7 79842576 to 79842587 11 - TSS region transcription start site region 73182
Tssr73183 7 79842615 to 79842626 11 - TSS region transcription start site region 73183
Tssr73184 7 79843275 to 79843283 8 - TSS region transcription start site region 73184
Tssr73185 7 79844524 to 79844539 15 - TSS region transcription start site region 73185
Tssr73186 7 79846432 to 79846443 11 - TSS region transcription start site region 73186
Cpgi19317 7 79847728 to 79848473 745 CpG island CpG island 19317
Tssr73187 7 79848173 to 79848190 17 - TSS region transcription start site region 73187
Tssr73188 7 79848191 to 79848224 33 - TSS region transcription start site region 73188
Tssr73189 7 79858325 to 79858351 26 - TSS region transcription start site region 73189
Tssr67376 7 79859212 to 79859230 18 + TSS region transcription start site region 67376
Tssr67377 7 79869382 to 79869387 5 + TSS region transcription start site region 67377
Tssr67378 7 79869626 to 79869643 17 + TSS region transcription start site region 67378
Ap3s2 7 79875325 to 79920640 45315 - protein coding gene adaptor-related protein complex 3, sigma 2 subunit
Tssr73190 7 79878304 to 79878318 14 - TSS region transcription start site region 73190
Tssr73191 7 79880043 to 79880068 25 - TSS region transcription start site region 73191
Tssr73192 7 79880267 to 79880298 31 - TSS region transcription start site region 73192
Tssr73193 7 79884611 to 79884614 3 - TSS region transcription start site region 73193
Tssr2309 7 79891101 to 79891105 4 + TSS region transcription start site region 2309
Gm26646 7 79916937 to 79920641 3704 + antisense lncRNA gene predicted gene, 26646
Cpgi19318 7 79920396 to 79920937 541 CpG island CpG island 19318
Tssr73194 7 79920599 to 79920658 59 - TSS region transcription start site region 73194
5430400D12Rik 7 79920723 to 79922521 1798 + bidirectional promoter lncRNA gene RIKEN cDNA 5430400D12 gene
Gm44950 7 79922572 to 79924867 2295 - unclassified gene predicted gene 44950
Tssr73195 7 79924844 to 79924847 3 - TSS region transcription start site region 73195
Arpin 7 79925359 to 79935264 9905 - protein coding gene actin-related protein 2/3 complex inhibitor
Cpgi19319 7 79935009 to 79935395 386 CpG island CpG island 19319
Tssr73196 7 79935241 to 79935255 14 - TSS region transcription start site region 73196
Tssr73197 7 79935258 to 79935371 113 - TSS region transcription start site region 73197
Gm31966 7 79935518 to 79939014 3496 + lncRNA gene predicted gene, 31966
Gm24541 7 79949187 to 79949282 95 + miRNA gene predicted gene, 24541
Tssr67379 7 80010920 to 80010958 38 + TSS region transcription start site region 67379
Tssr67380 7 80014214 to 80014217 3 + TSS region transcription start site region 67380
Tssr73198 7 80014956 to 80014992 36 - TSS region transcription start site region 73198
Cpgi19320 7 80024588 to 80025553 965 CpG island CpG island 19320
Zfp710 7 80024814 to 80092751 67937 + protein coding gene zinc finger protein 710
Tssr67381 7 80024827 to 80024841 14 + TSS region transcription start site region 67381
Tssr67382 7 80024847 to 80024883 36 + TSS region transcription start site region 67382
Tssr67383 7 80024891 to 80024907 16 + TSS region transcription start site region 67383
Tssr73199 7 80025113 to 80025135 22 - TSS region transcription start site region 73199
Tssr67384 7 80025273 to 80025284 11 + TSS region transcription start site region 67384
Tssr67385 7 80025301 to 80025320 19 + TSS region transcription start site region 67385
Tssr67386 7 80025813 to 80025829 16 + TSS region transcription start site region 67386
Tssr67387 7 80025906 to 80025921 15 + TSS region transcription start site region 67387
Tssr67388 7 80025933 to 80025950 17 + TSS region transcription start site region 67388
Tssr67389 7 80025993 to 80026028 35 + TSS region transcription start site region 67389
Cpgi19321 7 80026119 to 80027890 1771 CpG island CpG island 19321
Tssr67390 7 80026161 to 80026192 31 + TSS region transcription start site region 67390
Tssr67391 7 80026195 to 80026215 20 + TSS region transcription start site region 67391
Tssr67392 7 80026347 to 80026369 22 + TSS region transcription start site region 67392
Tssr67393 7 80026370 to 80026394 24 + TSS region transcription start site region 67393
Tssr67394 7 80026632 to 80026658 26 + TSS region transcription start site region 67394
Tssr67395 7 80027114 to 80027147 33 + TSS region transcription start site region 67395
Tssr67396 7 80027150 to 80027196 46 + TSS region transcription start site region 67396
Tssr67397 7 80027485 to 80027507 22 + TSS region transcription start site region 67397
Tssr67398 7 80027606 to 80027610 4 + TSS region transcription start site region 67398
Tssr67399 7 80028369 to 80028374 5 + TSS region transcription start site region 67399
Tssr67400 7 80029910 to 80029927 17 + TSS region transcription start site region 67400
Tssr67401 7 80030744 to 80030753 9 + TSS region transcription start site region 67401
Tssr67402 7 80030758 to 80030774 16 + TSS region transcription start site region 67402
D7Mit162 7 80031574 to 80031700 126 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 162
Gm44951 7 80036705 to 80038728 2023 + unclassified gene predicted gene 44951
Tssr67403 7 80038331 to 80038342 11 + TSS region transcription start site region 67403
Tssr67404 7 80040043 to 80040057 14 + TSS region transcription start site region 67404
Tssr67405 7 80040239 to 80040261 22 + TSS region transcription start site region 67405
Tssr73200 7 80056182 to 80056196 14 - TSS region transcription start site region 73200
Gm21057 7 80062710 to 80075257 12547 - antisense lncRNA gene predicted gene, 21057
Tssr73201 7 80066256 to 80066260 4 - TSS region transcription start site region 73201
Tssr73202 7 80074874 to 80074887 13 - TSS region transcription start site region 73202
Tssr73203 7 80075265 to 80075268 3 - TSS region transcription start site region 73203
Tssr67406 7 80081939 to 80081953 14 + TSS region transcription start site region 67406
Tssr67407 7 80082310 to 80082331 21 + TSS region transcription start site region 67407
Tssr67408 7 80082370 to 80082387 17 + TSS region transcription start site region 67408
Gm44949 7 80088982 to 80090431 1449 - antisense lncRNA gene predicted gene 44949
Tssr67409 7 80090591 to 80090618 27 + TSS region transcription start site region 67409
Tssr67410 7 80091330 to 80091343 13 + TSS region transcription start site region 67410
Tssr67411 7 80091674 to 80091684 10 + TSS region transcription start site region 67411
Idh2 7 80094846 to 80115392 20546 - protein coding gene isocitrate dehydrogenase 2 (NADP+), mitochondrial
Tssr73204 7 80096576 to 80096591 15 - TSS region transcription start site region 73204
Tssr73205 7 80099091 to 80099102 11 - TSS region transcription start site region 73205
Gm45203 7 80110804 to 80112634 1830 - unclassified gene predicted gene 45203
Tssr73206 7 80113970 to 80114009 39 - TSS region transcription start site region 73206
Cpgi19322 7 80114458 to 80115791 1333 CpG island CpG island 19322
Tssr73207 7 80115294 to 80115355 61 - TSS region transcription start site region 73207
Tssr73208 7 80130408 to 80130422 14 - TSS region transcription start site region 73208
Tssr67412 7 80153245 to 80153250 5 + TSS region transcription start site region 67412
Gm45202 7 80155169 to 80156771 1602 + lincRNA gene predicted gene 45202
D7Mit200 7 80166556 to 80166705 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 200
Tssr67413 7 80186297 to 80186326 29 + TSS region transcription start site region 67413
Cpgi19323 7 80186334 to 80187312 978 CpG island CpG island 19323
Tssr67414 7 80186698 to 80186731 33 + TSS region transcription start site region 67414
Tssr67415 7 80186835 to 80186904 69 + TSS region transcription start site region 67415
Sema4b 7 80186841 to 80226527 39686 + protein coding gene sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
Tssr67416 7 80186909 to 80186932 23 + TSS region transcription start site region 67416
Cpgi19324 7 80197998 to 80199200 1202 CpG island CpG island 19324
Tssr67417 7 80198390 to 80198458 68 + TSS region transcription start site region 67417
Tssr67418 7 80198564 to 80198628 64 + TSS region transcription start site region 67418
Gm45206 7 80209394 to 80211678 2284 + unclassified gene predicted gene 45206
Tssr67419 7 80213940 to 80213957 17 + TSS region transcription start site region 67419
Tssr67420 7 80220953 to 80220957 4 + TSS region transcription start site region 67420
Cib1 7 80227156 to 80232805 5649 - protein coding gene calcium and integrin binding 1 (calmyrin)
Cpgi19325 7 80232140 to 80233169 1029 CpG island CpG island 19325
Tssr73209 7 80232479 to 80232498 19 - TSS region transcription start site region 73209
Tssr73210 7 80232556 to 80232633 77 - TSS region transcription start site region 73210
Tssr73211 7 80232752 to 80232842 90 - TSS region transcription start site region 73211
Tssr67421 7 80232862 to 80232945 83 + TSS region transcription start site region 67421
Gdpgp1 7 80232893 to 80241420 8527 + protein coding gene GDP-D-glucose phosphorylase 1
Gm15504 7 80237680 to 80237944 264 - pseudogene predicted gene 15504
Cpgi19326 7 80246114 to 80246805 691 CpG island CpG island 19326
Tssr2310 7 80246359 to 80246364 5 + TSS region transcription start site region 2310
Tssr67422 7 80246369 to 80246371 2 + TSS region transcription start site region 67422
Tssr67423 7 80246375 to 80246429 54 + TSS region transcription start site region 67423
Ttll13 7 80246376 to 80260821 14445 + protein coding gene tubulin tyrosine ligase-like family, member 13
Tssr67424 7 80246430 to 80246434 4 + TSS region transcription start site region 67424
Tssr67425 7 80246447 to 80246456 9 + TSS region transcription start site region 67425
Tssr67426 7 80246506 to 80246520 14 + TSS region transcription start site region 67426
Tssr67427 7 80246529 to 80246579 50 + TSS region transcription start site region 67427
Cpgi19327 7 80261058 to 80261845 787 CpG island CpG island 19327
Tssr67428 7 80261202 to 80261257 55 + TSS region transcription start site region 67428
Ngrn 7 80261215 to 80265374 4159 + protein coding gene neugrin, neurite outgrowth associated
Cpgi19328 7 80269566 to 80270129 563 CpG island CpG island 19328
Vps33b 7 80269632 to 80291579 21947 + protein coding gene vacuolar protein sorting 33B
Tssr67429 7 80269632 to 80269726 94 + TSS region transcription start site region 67429
Tssr2311 7 80285120 to 80285131 11 + TSS region transcription start site region 2311
Tssr67430 7 80289999 to 80290007 8 + TSS region transcription start site region 67430
Tssr67431 7 80291246 to 80291271 25 + TSS region transcription start site region 67431
Cpgi19329 7 80294146 to 80295122 976 CpG island CpG island 19329
Prc1 7 80294451 to 80316259 21808 + protein coding gene protein regulator of cytokinesis 1
Tssr67432 7 80294459 to 80294492 33 + TSS region transcription start site region 67432
Tssr67433 7 80294541 to 80294550 9 + TSS region transcription start site region 67433
Tssr67434 7 80294557 to 80294565 8 + TSS region transcription start site region 67434
Rccd1 7 80294591 to 80324696 30105 - protein coding gene RCC1 domain containing 1
6330403N20Rik 7 80297728 to 80299616 1888 - lincRNA gene RIKEN cDNA 6330403N20 gene
Cpgi19330 7 80323991 to 80324474 483 CpG island CpG island 19330
Tssr73212 7 80324099 to 80324112 13 - TSS region transcription start site region 73212
Tssr73213 7 80324115 to 80324137 22 - TSS region transcription start site region 73213
Tssr73214 7 80324418 to 80324458 40 - TSS region transcription start site region 73214
Unc45a 7 80325292 to 80341000 15708 - protein coding gene unc-45 myosin chaperone A
Cpgi19331 7 80339528 to 80340498 970 CpG island CpG island 19331