Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:79517006-79688676

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mir9-3hg 7 79500026 to 79534403 34377 + lincRNA gene Mir9-3 host gene
Gm37608 7 79516882 to 79518761 1879 + unclassified gene predicted gene, 37608
Cpgi19301 7 79535289 to 79536662 1373 CpG island CpG island 19301
Gm35040 7 79535737 to 79558537 22800 + lincRNA gene predicted gene, 35040
Tssr67355 7 79535997 to 79536061 64 + TSS region transcription start site region 67355
Tssr67356 7 79536141 to 79536166 25 + TSS region transcription start site region 67356
D7Mit213 7 79539293 to 79539432 139 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 213
Gm31740 7 79542837 to 79550625 7788 - lncRNA gene predicted gene, 31740
Cpgi19302 7 79543023 to 79544462 1439 CpG island CpG island 19302
Cpgi19303 7 79544663 to 79544902 239 CpG island CpG island 19303
Cpgi19304 7 79555734 to 79555962 228 CpG island CpG island 19304
Gm45168 7 79577755 to 79579079 1324 - lincRNA gene predicted gene 45168
Cpgi19305 7 79578057 to 79578227 170 CpG island CpG island 19305
Cpgi19306 7 79578815 to 79579196 381 CpG island CpG island 19306
Gm45169 7 79586648 to 79592613 5965 - lincRNA gene predicted gene 45169
Cpgi19307 7 79592558 to 79592883 325 CpG island CpG island 19307
Rhcg 7 79593363 to 79617657 24294 - protein coding gene Rhesus blood group-associated C glycoprotein
Tssr73109 7 79594991 to 79595009 18 - TSS region transcription start site region 73109
Tssr73110 7 79596559 to 79596569 10 - TSS region transcription start site region 73110
Tssr73111 7 79596684 to 79596698 14 - TSS region transcription start site region 73111
Tssr73112 7 79596880 to 79596892 12 - TSS region transcription start site region 73112
Gm45170 7 79602006 to 79603676 1670 - unclassified gene predicted gene 45170
Cpgi19308 7 79607530 to 79607823 293 CpG island CpG island 19308
Cpgi19309 7 79617255 to 79617872 617 CpG island CpG island 19309
Tssr73113 7 79617549 to 79617565 16 - TSS region transcription start site region 73113
Tssr73114 7 79617642 to 79617659 17 - TSS region transcription start site region 73114
Gm17840 7 79634704 to 79635956 1252 + pseudogene predicted gene, 17840
Cpgi19310 7 79659680 to 79661228 1548 CpG island CpG island 19310
Tssr67357 7 79660190 to 79660201 11 + TSS region transcription start site region 67357
Ticrr 7 79660196 to 79698148 37952 + protein coding gene TOPBP1-interacting checkpoint and replication regulator
Tssr67358 7 79660211 to 79660261 50 + TSS region transcription start site region 67358
D7Mit181 7 79671770 to 79671920 150 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 181
Tssr67359 7 79686497 to 79686501 4 + TSS region transcription start site region 67359