Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:79470287-80110625

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231 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr73107 7 79477362 to 79477390 28 - TSS region transcription start site region 73107
Cpgi19295 7 79495991 to 79496418 427 CpG island CpG island 19295
Cpgi19296 7 79499072 to 79500565 1493 CpG island CpG island 19296
Tssr67348 7 79499134 to 79499151 17 + TSS region transcription start site region 67348
Tssr67349 7 79499976 to 79499987 11 + TSS region transcription start site region 67349
Tssr67350 7 79500018 to 79500035 17 + TSS region transcription start site region 67350
Mir9-3hg 7 79500026 to 79534403 34377 + lincRNA gene Mir9-3 host gene
Tssr67351 7 79500045 to 79500066 21 + TSS region transcription start site region 67351
Tssr67352 7 79500081 to 79500095 14 + TSS region transcription start site region 67352
Cpgi19297 7 79504439 to 79505707 1268 CpG island CpG island 19297
Tssr73108 7 79504754 to 79504763 9 - TSS region transcription start site region 73108
Tssr67353 7 79504941 to 79504954 13 + TSS region transcription start site region 67353
Mir9-3 7 79505264 to 79505353 89 + miRNA gene microRNA 9-3
Tssr67354 7 79505336 to 79505347 11 + TSS region transcription start site region 67354
Cpgi19298 7 79505907 to 79506235 328 CpG island CpG island 19298
Cpgi19299 7 79508130 to 79509461 1331 CpG island CpG island 19299
A330074H02Rik 7 79510362 to 79511400 1038 + unclassified gene RIKEN cDNA A330074H02 gene
2900037B21Rik 7 79512924 to 79513260 336 + unclassified gene RIKEN cDNA 2900037B21 gene
Cpgi19300 7 79514619 to 79516000 1381 CpG island CpG island 19300
Gm37608 7 79516882 to 79518761 1879 + unclassified gene predicted gene, 37608
Cpgi19301 7 79535289 to 79536662 1373 CpG island CpG island 19301
Gm35040 7 79535737 to 79558537 22800 + lincRNA gene predicted gene, 35040
Tssr67355 7 79535997 to 79536061 64 + TSS region transcription start site region 67355
Tssr67356 7 79536141 to 79536166 25 + TSS region transcription start site region 67356
D7Mit213 7 79539293 to 79539432 139 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 213
Gm31740 7 79542837 to 79550625 7788 - lncRNA gene predicted gene, 31740
Cpgi19302 7 79543023 to 79544462 1439 CpG island CpG island 19302
Cpgi19303 7 79544663 to 79544902 239 CpG island CpG island 19303
Cpgi19304 7 79555734 to 79555962 228 CpG island CpG island 19304
Gm45168 7 79577755 to 79579079 1324 - lincRNA gene predicted gene 45168
Cpgi19305 7 79578057 to 79578227 170 CpG island CpG island 19305
Cpgi19306 7 79578815 to 79579196 381 CpG island CpG island 19306
Gm45169 7 79586648 to 79592613 5965 - lincRNA gene predicted gene 45169
Cpgi19307 7 79592558 to 79592883 325 CpG island CpG island 19307
Rhcg 7 79593363 to 79617657 24294 - protein coding gene Rhesus blood group-associated C glycoprotein
Tssr73109 7 79594991 to 79595009 18 - TSS region transcription start site region 73109
Tssr73110 7 79596559 to 79596569 10 - TSS region transcription start site region 73110
Tssr73111 7 79596684 to 79596698 14 - TSS region transcription start site region 73111
Tssr73112 7 79596880 to 79596892 12 - TSS region transcription start site region 73112
Gm45170 7 79602006 to 79603676 1670 - unclassified gene predicted gene 45170
Cpgi19308 7 79607530 to 79607823 293 CpG island CpG island 19308
Cpgi19309 7 79617255 to 79617872 617 CpG island CpG island 19309
Tssr73113 7 79617549 to 79617565 16 - TSS region transcription start site region 73113
Tssr73114 7 79617642 to 79617659 17 - TSS region transcription start site region 73114
Gm17840 7 79634704 to 79635956 1252 + pseudogene predicted gene, 17840
Cpgi19310 7 79659680 to 79661228 1548 CpG island CpG island 19310
Tssr67357 7 79660190 to 79660201 11 + TSS region transcription start site region 67357
Ticrr 7 79660196 to 79698148 37952 + protein coding gene TOPBP1-interacting checkpoint and replication regulator
Tssr67358 7 79660211 to 79660261 50 + TSS region transcription start site region 67358
D7Mit181 7 79671770 to 79671920 150 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 181
Tssr67359 7 79686497 to 79686501 4 + TSS region transcription start site region 67359
Tssr67360 7 79691879 to 79691887 8 + TSS region transcription start site region 67360
Kif7 7 79698098 to 79715720 17622 - protein coding gene kinesin family member 7
Cpgi19311 7 79709940 to 79711021 1081 CpG island CpG island 19311
9330171B17Rik 7 79710283 to 79712357 2074 + antisense lncRNA gene RIKEN cDNA 9330171B17 gene
Tssr67361 7 79710364 to 79710375 11 + TSS region transcription start site region 67361
Tssr67362 7 79710377 to 79710406 29 + TSS region transcription start site region 67362
Tssr67363 7 79710408 to 79710423 15 + TSS region transcription start site region 67363
Cpgi19312 7 79715176 to 79715884 708 CpG island CpG island 19312
Tssr73115 7 79715688 to 79715749 61 - TSS region transcription start site region 73115
Plin1 7 79721164 to 79732903 11739 - protein coding gene perilipin 1
Cpgi19313 7 79721200 to 79721834 634 CpG island CpG island 19313
Tssr73116 7 79721220 to 79721233 13 - TSS region transcription start site region 73116
Tssr73117 7 79721240 to 79721253 13 - TSS region transcription start site region 73117
Tssr73118 7 79721285 to 79721297 12 - TSS region transcription start site region 73118
Tssr73119 7 79732163 to 79732177 14 - TSS region transcription start site region 73119
Tssr73120 7 79732194 to 79732199 5 - TSS region transcription start site region 73120
Tssr73121 7 79732755 to 79732847 92 - TSS region transcription start site region 73121
Tssr73122 7 79732866 to 79732882 16 - TSS region transcription start site region 73122
Tssr73123 7 79732903 to 79732919 16 - TSS region transcription start site region 73123
Tssr73124 7 79733337 to 79733345 8 - TSS region transcription start site region 73124
Pex11a 7 79735957 to 79743126 7169 - protein coding gene peroxisomal biogenesis factor 11 alpha
Gm44706 7 79740678 to 79742016 1338 + antisense lncRNA gene predicted gene 44706
Cpgi19314 7 79742661 to 79743229 568 CpG island CpG island 19314
Tssr73125 7 79742967 to 79742976 9 - TSS region transcription start site region 73125
Tssr73126 7 79742985 to 79742996 11 - TSS region transcription start site region 73126
Tssr73127 7 79743015 to 79743033 18 - TSS region transcription start site region 73127
Tssr73128 7 79743034 to 79743088 54 - TSS region transcription start site region 73128
Tssr73129 7 79743104 to 79743113 9 - TSS region transcription start site region 73129
Tssr67364 7 79743142 to 79743169 27 + TSS region transcription start site region 67364
Wdr93 7 79743163 to 79785950 42787 + protein coding gene WD repeat domain 93
Tssr67365 7 79743170 to 79743187 17 + TSS region transcription start site region 67365
Tssr67366 7 79761373 to 79761377 4 + TSS region transcription start site region 67366
Tssr67367 7 79770518 to 79770523 5 + TSS region transcription start site region 67367
Gm44705 7 79790287 to 79790625 338 - pseudogene predicted gene 44705
Mesp1 7 79792241 to 79793590 1349 - protein coding gene mesoderm posterior 1
Cpgi19315 7 79792343 to 79793783 1440 CpG island CpG island 19315
Tssr73130 7 79793014 to 79793047 33 - TSS region transcription start site region 73130
Tssr73131 7 79793060 to 79793073 13 - TSS region transcription start site region 73131
Tssr73132 7 79793207 to 79793233 26 - TSS region transcription start site region 73132
Tssr73133 7 79793252 to 79793259 7 - TSS region transcription start site region 73133
Tssr73134 7 79801539 to 79801553 14 - TSS region transcription start site region 73134
Cpgi19316 7 79810594 to 79811725 1131 CpG island CpG island 19316
Mesp2 7 79810727 to 79813431 2704 + protein coding gene mesoderm posterior 2
Tssr67368 7 79811200 to 79811215 15 + TSS region transcription start site region 67368
Tssr67369 7 79811221 to 79811266 45 + TSS region transcription start site region 67369
Tssr67370 7 79821801 to 79821811 10 + TSS region transcription start site region 67370
Anpep 7 79821803 to 79848189 26386 - protein coding gene alanyl (membrane) aminopeptidase
Tssr73135 7 79822150 to 79822162 12 - TSS region transcription start site region 73135
Tssr73136 7 79822171 to 79822195 24 - TSS region transcription start site region 73136
Tssr73137 7 79822308 to 79822346 38 - TSS region transcription start site region 73137
Tssr73138 7 79822348 to 79822366 18 - TSS region transcription start site region 73138
Tssr73139 7 79825335 to 79825347 12 - TSS region transcription start site region 73139
Tssr73140 7 79825734 to 79825747 13 - TSS region transcription start site region 73140
Tssr2308 7 79825793 to 79825853 60 - TSS region transcription start site region 2308
Tssr73141 7 79826908 to 79826927 19 - TSS region transcription start site region 73141
Tssr73142 7 79827593 to 79827604 11 - TSS region transcription start site region 73142
Tssr73143 7 79827632 to 79827655 23 - TSS region transcription start site region 73143
Gm44974 7 79830593 to 79831871 1278 - unclassified gene predicted gene 44974
Tssr73144 7 79835405 to 79835416 11 - TSS region transcription start site region 73144
Tssr73145 7 79836250 to 79836262 12 - TSS region transcription start site region 73145
Tssr73146 7 79836288 to 79836301 13 - TSS region transcription start site region 73146
Tssr73147 7 79836318 to 79836335 17 - TSS region transcription start site region 73147
Tssr73148 7 79836342 to 79836353 11 - TSS region transcription start site region 73148
Tssr73149 7 79836360 to 79836389 29 - TSS region transcription start site region 73149
Tssr73150 7 79836397 to 79836408 11 - TSS region transcription start site region 73150
Tssr73151 7 79837659 to 79837666 7 - TSS region transcription start site region 73151
Tssr73152 7 79837693 to 79837710 17 - TSS region transcription start site region 73152
Tssr73153 7 79838294 to 79838320 26 - TSS region transcription start site region 73153
Tssr73154 7 79838468 to 79838482 14 - TSS region transcription start site region 73154
Tssr73155 7 79838682 to 79838692 10 - TSS region transcription start site region 73155
Tssr73156 7 79838725 to 79838756 31 - TSS region transcription start site region 73156
Tssr73157 7 79838936 to 79838954 18 - TSS region transcription start site region 73157
Tssr73158 7 79839190 to 79839204 14 - TSS region transcription start site region 73158
Tssr73159 7 79839227 to 79839254 27 - TSS region transcription start site region 73159
Tssr73160 7 79839453 to 79839498 45 - TSS region transcription start site region 73160
Tssr73161 7 79840903 to 79840917 14 - TSS region transcription start site region 73161
Tssr73162 7 79840920 to 79840975 55 - TSS region transcription start site region 73162
Tssr73163 7 79840979 to 79840996 17 - TSS region transcription start site region 73163
Tssr73164 7 79841124 to 79841159 35 - TSS region transcription start site region 73164
Tssr73165 7 79841685 to 79841705 20 - TSS region transcription start site region 73165
Tssr73166 7 79841726 to 79841737 11 - TSS region transcription start site region 73166
Tssr67371 7 79841829 to 79841839 10 + TSS region transcription start site region 67371
Tssr73167 7 79841934 to 79841939 5 - TSS region transcription start site region 73167
Tssr73168 7 79841946 to 79841960 14 - TSS region transcription start site region 73168
Tssr73169 7 79841974 to 79841997 23 - TSS region transcription start site region 73169
Tssr73170 7 79842005 to 79842016 11 - TSS region transcription start site region 73170
Tssr67372 7 79842017 to 79842090 73 + TSS region transcription start site region 67372
Tssr73171 7 79842076 to 79842101 25 - TSS region transcription start site region 73171
Tssr73172 7 79842104 to 79842113 9 - TSS region transcription start site region 73172
Tssr73173 7 79842120 to 79842131 11 - TSS region transcription start site region 73173
Tssr73174 7 79842208 to 79842217 9 - TSS region transcription start site region 73174
Tssr73175 7 79842229 to 79842245 16 - TSS region transcription start site region 73175
Tssr73176 7 79842287 to 79842302 15 - TSS region transcription start site region 73176
Tssr73177 7 79842317 to 79842328 11 - TSS region transcription start site region 73177
Tssr73178 7 79842343 to 79842354 11 - TSS region transcription start site region 73178
Tssr73179 7 79842407 to 79842419 12 - TSS region transcription start site region 73179
Tssr73180 7 79842474 to 79842509 35 - TSS region transcription start site region 73180
Tssr67373 7 79842477 to 79842509 32 + TSS region transcription start site region 67373
Tssr67374 7 79842523 to 79842549 26 + TSS region transcription start site region 67374
Tssr67375 7 79842557 to 79842585 28 + TSS region transcription start site region 67375
Tssr73181 7 79842557 to 79842575 18 - TSS region transcription start site region 73181
Tssr73182 7 79842576 to 79842587 11 - TSS region transcription start site region 73182
Tssr73183 7 79842615 to 79842626 11 - TSS region transcription start site region 73183
Tssr73184 7 79843275 to 79843283 8 - TSS region transcription start site region 73184
Tssr73185 7 79844524 to 79844539 15 - TSS region transcription start site region 73185
Tssr73186 7 79846432 to 79846443 11 - TSS region transcription start site region 73186
Cpgi19317 7 79847728 to 79848473 745 CpG island CpG island 19317
Tssr73187 7 79848173 to 79848190 17 - TSS region transcription start site region 73187
Tssr73188 7 79848191 to 79848224 33 - TSS region transcription start site region 73188
Tssr73189 7 79858325 to 79858351 26 - TSS region transcription start site region 73189
Tssr67376 7 79859212 to 79859230 18 + TSS region transcription start site region 67376
Tssr67377 7 79869382 to 79869387 5 + TSS region transcription start site region 67377
Tssr67378 7 79869626 to 79869643 17 + TSS region transcription start site region 67378
Ap3s2 7 79875325 to 79920640 45315 - protein coding gene adaptor-related protein complex 3, sigma 2 subunit
Tssr73190 7 79878304 to 79878318 14 - TSS region transcription start site region 73190
Tssr73191 7 79880043 to 79880068 25 - TSS region transcription start site region 73191
Tssr73192 7 79880267 to 79880298 31 - TSS region transcription start site region 73192
Tssr73193 7 79884611 to 79884614 3 - TSS region transcription start site region 73193
Tssr2309 7 79891101 to 79891105 4 + TSS region transcription start site region 2309
Gm26646 7 79916937 to 79920641 3704 + antisense lncRNA gene predicted gene, 26646
Cpgi19318 7 79920396 to 79920937 541 CpG island CpG island 19318
Tssr73194 7 79920599 to 79920658 59 - TSS region transcription start site region 73194
5430400D12Rik 7 79920723 to 79922521 1798 + bidirectional promoter lncRNA gene RIKEN cDNA 5430400D12 gene
Gm44950 7 79922572 to 79924867 2295 - unclassified gene predicted gene 44950
Tssr73195 7 79924844 to 79924847 3 - TSS region transcription start site region 73195
Arpin 7 79925359 to 79935264 9905 - protein coding gene actin-related protein 2/3 complex inhibitor
Cpgi19319 7 79935009 to 79935395 386 CpG island CpG island 19319
Tssr73196 7 79935241 to 79935255 14 - TSS region transcription start site region 73196
Tssr73197 7 79935258 to 79935371 113 - TSS region transcription start site region 73197
Gm31966 7 79935518 to 79939014 3496 + lncRNA gene predicted gene, 31966
Gm24541 7 79949187 to 79949282 95 + miRNA gene predicted gene, 24541
Tssr67379 7 80010920 to 80010958 38 + TSS region transcription start site region 67379
Tssr67380 7 80014214 to 80014217 3 + TSS region transcription start site region 67380
Tssr73198 7 80014956 to 80014992 36 - TSS region transcription start site region 73198
Cpgi19320 7 80024588 to 80025553 965 CpG island CpG island 19320
Zfp710 7 80024814 to 80092751 67937 + protein coding gene zinc finger protein 710
Tssr67381 7 80024827 to 80024841 14 + TSS region transcription start site region 67381
Tssr67382 7 80024847 to 80024883 36 + TSS region transcription start site region 67382
Tssr67383 7 80024891 to 80024907 16 + TSS region transcription start site region 67383
Tssr73199 7 80025113 to 80025135 22 - TSS region transcription start site region 73199
Tssr67384 7 80025273 to 80025284 11 + TSS region transcription start site region 67384
Tssr67385 7 80025301 to 80025320 19 + TSS region transcription start site region 67385
Tssr67386 7 80025813 to 80025829 16 + TSS region transcription start site region 67386
Tssr67387 7 80025906 to 80025921 15 + TSS region transcription start site region 67387
Tssr67388 7 80025933 to 80025950 17 + TSS region transcription start site region 67388
Tssr67389 7 80025993 to 80026028 35 + TSS region transcription start site region 67389
Cpgi19321 7 80026119 to 80027890 1771 CpG island CpG island 19321
Tssr67390 7 80026161 to 80026192 31 + TSS region transcription start site region 67390
Tssr67391 7 80026195 to 80026215 20 + TSS region transcription start site region 67391