Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:79438057-79718227

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fanci 7 79392312 to 79450265 57953 + protein coding gene Fanconi anemia, complementation group I
Polg 7 79448910 to 79466306 17396 - protein coding gene polymerase (DNA directed), gamma
Cpgi19294 7 79464612 to 79467201 2589 CpG island CpG island 19294
Tssr73103 7 79465502 to 79465512 10 - TSS region transcription start site region 73103
Tssr73104 7 79466012 to 79466028 16 - TSS region transcription start site region 73104
Tssr73105 7 79466127 to 79466136 9 - TSS region transcription start site region 73105
Tssr73106 7 79466167 to 79466240 73 - TSS region transcription start site region 73106
Gm10616 7 79466409 to 79468535 2126 + unclassified gene predicted gene 10616
n-TRtcg5 7 79466419 to 79466491 72 + tRNA gene nuclear encoded tRNA arginine 5 (anticodon TCG)
Tssr73107 7 79477362 to 79477390 28 - TSS region transcription start site region 73107
Cpgi19295 7 79495991 to 79496418 427 CpG island CpG island 19295
Cpgi19296 7 79499072 to 79500565 1493 CpG island CpG island 19296
Tssr67348 7 79499134 to 79499151 17 + TSS region transcription start site region 67348
Tssr67349 7 79499976 to 79499987 11 + TSS region transcription start site region 67349
Tssr67350 7 79500018 to 79500035 17 + TSS region transcription start site region 67350
Mir9-3hg 7 79500026 to 79534403 34377 + lincRNA gene Mir9-3 host gene
Tssr67351 7 79500045 to 79500066 21 + TSS region transcription start site region 67351
Tssr67352 7 79500081 to 79500095 14 + TSS region transcription start site region 67352
Cpgi19297 7 79504439 to 79505707 1268 CpG island CpG island 19297
Tssr73108 7 79504754 to 79504763 9 - TSS region transcription start site region 73108
Tssr67353 7 79504941 to 79504954 13 + TSS region transcription start site region 67353
Mir9-3 7 79505264 to 79505353 89 + miRNA gene microRNA 9-3
Tssr67354 7 79505336 to 79505347 11 + TSS region transcription start site region 67354
Cpgi19298 7 79505907 to 79506235 328 CpG island CpG island 19298
Cpgi19299 7 79508130 to 79509461 1331 CpG island CpG island 19299
A330074H02Rik 7 79510362 to 79511400 1038 + unclassified gene RIKEN cDNA A330074H02 gene
2900037B21Rik 7 79512924 to 79513260 336 + unclassified gene RIKEN cDNA 2900037B21 gene
Cpgi19300 7 79514619 to 79516000 1381 CpG island CpG island 19300
Gm37608 7 79516882 to 79518761 1879 + unclassified gene predicted gene, 37608
Cpgi19301 7 79535289 to 79536662 1373 CpG island CpG island 19301
Gm35040 7 79535737 to 79558537 22800 + lincRNA gene predicted gene, 35040
Tssr67355 7 79535997 to 79536061 64 + TSS region transcription start site region 67355
Tssr67356 7 79536141 to 79536166 25 + TSS region transcription start site region 67356
D7Mit213 7 79539293 to 79539432 139 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 213
Gm31740 7 79542837 to 79550625 7788 - lncRNA gene predicted gene, 31740
Cpgi19302 7 79543023 to 79544462 1439 CpG island CpG island 19302
Cpgi19303 7 79544663 to 79544902 239 CpG island CpG island 19303
Cpgi19304 7 79555734 to 79555962 228 CpG island CpG island 19304
Gm45168 7 79577755 to 79579079 1324 - lincRNA gene predicted gene 45168
Cpgi19305 7 79578057 to 79578227 170 CpG island CpG island 19305
Cpgi19306 7 79578815 to 79579196 381 CpG island CpG island 19306
Gm45169 7 79586648 to 79592613 5965 - lincRNA gene predicted gene 45169
Cpgi19307 7 79592558 to 79592883 325 CpG island CpG island 19307
Rhcg 7 79593363 to 79617657 24294 - protein coding gene Rhesus blood group-associated C glycoprotein
Tssr73109 7 79594991 to 79595009 18 - TSS region transcription start site region 73109
Tssr73110 7 79596559 to 79596569 10 - TSS region transcription start site region 73110
Tssr73111 7 79596684 to 79596698 14 - TSS region transcription start site region 73111
Tssr73112 7 79596880 to 79596892 12 - TSS region transcription start site region 73112
Gm45170 7 79602006 to 79603676 1670 - unclassified gene predicted gene 45170
Cpgi19308 7 79607530 to 79607823 293 CpG island CpG island 19308
Cpgi19309 7 79617255 to 79617872 617 CpG island CpG island 19309
Tssr73113 7 79617549 to 79617565 16 - TSS region transcription start site region 73113
Tssr73114 7 79617642 to 79617659 17 - TSS region transcription start site region 73114
Gm17840 7 79634704 to 79635956 1252 + pseudogene predicted gene, 17840
Cpgi19310 7 79659680 to 79661228 1548 CpG island CpG island 19310
Tssr67357 7 79660190 to 79660201 11 + TSS region transcription start site region 67357
Ticrr 7 79660196 to 79698148 37952 + protein coding gene TOPBP1-interacting checkpoint and replication regulator
Tssr67358 7 79660211 to 79660261 50 + TSS region transcription start site region 67358
D7Mit181 7 79671770 to 79671920 150 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 181
Tssr67359 7 79686497 to 79686501 4 + TSS region transcription start site region 67359
Tssr67360 7 79691879 to 79691887 8 + TSS region transcription start site region 67360
Kif7 7 79698098 to 79715720 17622 - protein coding gene kinesin family member 7
Cpgi19311 7 79709940 to 79711021 1081 CpG island CpG island 19311
9330171B17Rik 7 79710283 to 79712357 2074 + antisense lncRNA gene RIKEN cDNA 9330171B17 gene
Tssr67361 7 79710364 to 79710375 11 + TSS region transcription start site region 67361
Tssr67362 7 79710377 to 79710406 29 + TSS region transcription start site region 67362
Tssr67363 7 79710408 to 79710423 15 + TSS region transcription start site region 67363
Cpgi19312 7 79715176 to 79715884 708 CpG island CpG island 19312
Tssr73115 7 79715688 to 79715749 61 - TSS region transcription start site region 73115