Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:79396167-79536240

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fanci 7 79392312 to 79450265 57953 + protein coding gene Fanconi anemia, complementation group I
Gm31653 7 79396496 to 79399128 2632 - lncRNA gene predicted gene, 31653
Tssr67346 7 79398665 to 79398681 16 + TSS region transcription start site region 67346
Tssr67347 7 79399133 to 79399145 12 + TSS region transcription start site region 67347
Gm16017 7 79412310 to 79412517 207 - pseudogene predicted gene 16017
D7Jpk3 7 79433189 to 79433329 140 DNA segment DNA segment, Chr 7, Japan, Kominami 3
Polg 7 79448910 to 79466306 17396 - protein coding gene polymerase (DNA directed), gamma
Cpgi19294 7 79464612 to 79467201 2589 CpG island CpG island 19294
Tssr73103 7 79465502 to 79465512 10 - TSS region transcription start site region 73103
Tssr73104 7 79466012 to 79466028 16 - TSS region transcription start site region 73104
Tssr73105 7 79466127 to 79466136 9 - TSS region transcription start site region 73105
Tssr73106 7 79466167 to 79466240 73 - TSS region transcription start site region 73106
Gm10616 7 79466409 to 79468535 2126 + unclassified gene predicted gene 10616
n-TRtcg5 7 79466419 to 79466491 72 + tRNA gene nuclear encoded tRNA arginine 5 (anticodon TCG)
Tssr73107 7 79477362 to 79477390 28 - TSS region transcription start site region 73107
Cpgi19295 7 79495991 to 79496418 427 CpG island CpG island 19295
Cpgi19296 7 79499072 to 79500565 1493 CpG island CpG island 19296
Tssr67348 7 79499134 to 79499151 17 + TSS region transcription start site region 67348
Tssr67349 7 79499976 to 79499987 11 + TSS region transcription start site region 67349
Tssr67350 7 79500018 to 79500035 17 + TSS region transcription start site region 67350
Mir9-3hg 7 79500026 to 79534403 34377 + lincRNA gene Mir9-3 host gene
Tssr67351 7 79500045 to 79500066 21 + TSS region transcription start site region 67351
Tssr67352 7 79500081 to 79500095 14 + TSS region transcription start site region 67352
Cpgi19297 7 79504439 to 79505707 1268 CpG island CpG island 19297
Tssr73108 7 79504754 to 79504763 9 - TSS region transcription start site region 73108
Tssr67353 7 79504941 to 79504954 13 + TSS region transcription start site region 67353
Mir9-3 7 79505264 to 79505353 89 + miRNA gene microRNA 9-3
Tssr67354 7 79505336 to 79505347 11 + TSS region transcription start site region 67354
Cpgi19298 7 79505907 to 79506235 328 CpG island CpG island 19298
Cpgi19299 7 79508130 to 79509461 1331 CpG island CpG island 19299
A330074H02Rik 7 79510362 to 79511400 1038 + unclassified gene RIKEN cDNA A330074H02 gene
2900037B21Rik 7 79512924 to 79513260 336 + unclassified gene RIKEN cDNA 2900037B21 gene
Cpgi19300 7 79514619 to 79516000 1381 CpG island CpG island 19300
Gm37608 7 79516882 to 79518761 1879 + unclassified gene predicted gene, 37608
Cpgi19301 7 79535289 to 79536662 1373 CpG island CpG island 19301
Gm35040 7 79535737 to 79558537 22800 + lincRNA gene predicted gene, 35040
Tssr67355 7 79535997 to 79536061 64 + TSS region transcription start site region 67355
Tssr67356 7 79536141 to 79536166 25 + TSS region transcription start site region 67356