Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:79115502-79815512

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157 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hapln3 7 79115102 to 79131018 15916 - protein coding gene hyaluronan and proteoglycan link protein 3
Cpgi19290 7 79130815 to 79131080 265 CpG island CpG island 19290
Mfge8 7 79133768 to 79149060 15292 - protein coding gene milk fat globule-EGF factor 8 protein
Tssr73089 7 79143301 to 79143327 26 - TSS region transcription start site region 73089
Tssr73090 7 79145295 to 79145315 20 - TSS region transcription start site region 73090
Tssr73091 7 79145361 to 79145384 23 - TSS region transcription start site region 73091
Cpgi19291 7 79148597 to 79149257 660 CpG island CpG island 19291
Tssr73092 7 79149015 to 79149029 14 - TSS region transcription start site region 73092
Tssr73093 7 79149042 to 79149062 20 - TSS region transcription start site region 73093
D7Dcr33 7 79214644 to 79214738 94 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 33
Gm39040 7 79243823 to 79247576 3753 - lncRNA gene predicted gene, 39040
Tssr2307 7 79261551 to 79261556 5 + TSS region transcription start site region 2307
Gm31510 7 79271688 to 79273035 1347 - bidirectional promoter lncRNA gene predicted gene, 31510
Cpgi19292 7 79273019 to 79273800 781 CpG island CpG island 19292
Tssr67330 7 79273214 to 79273225 11 + TSS region transcription start site region 67330
Tssr67331 7 79273248 to 79273270 22 + TSS region transcription start site region 67331
Abhd2 7 79273266 to 79361601 88335 + protein coding gene abhydrolase domain containing 2
Tssr67332 7 79273277 to 79273295 18 + TSS region transcription start site region 67332
Gm44639 7 79277767 to 79280775 3008 + unclassified gene predicted gene 44639
Tssr67333 7 79290565 to 79290570 5 + TSS region transcription start site region 67333
Tssr67334 7 79297015 to 79297048 33 + TSS region transcription start site region 67334
Tssr67335 7 79297105 to 79297139 34 + TSS region transcription start site region 67335
Gm39041 7 79298950 to 79302400 3450 + lncRNA gene predicted gene, 39041
Tssr67336 7 79299836 to 79299863 27 + TSS region transcription start site region 67336
Tssr73094 7 79300914 to 79300926 12 - TSS region transcription start site region 73094
Tssr73095 7 79300944 to 79300954 10 - TSS region transcription start site region 73095
Tssr73096 7 79300960 to 79300982 22 - TSS region transcription start site region 73096
Tssr67337 7 79308015 to 79308023 8 + TSS region transcription start site region 67337
Tssr67338 7 79323535 to 79323548 13 + TSS region transcription start site region 67338
Gm24224 7 79352488 to 79352745 257 - unclassified non-coding RNA gene predicted gene, 24224
Tssr67339 7 79360264 to 79360276 12 + TSS region transcription start site region 67339
Tssr67340 7 79361132 to 79361144 12 + TSS region transcription start site region 67340
Tssr67341 7 79363620 to 79363644 24 + TSS region transcription start site region 67341
Tssr67342 7 79364125 to 79364135 10 + TSS region transcription start site region 67342
Tssr67343 7 79364749 to 79364762 13 + TSS region transcription start site region 67343
Tssr67344 7 79365121 to 79365125 4 + TSS region transcription start site region 67344
Rlbp1 7 79374865 to 79387043 12178 - protein coding gene retinaldehyde binding protein 1
D7Mit250 7 79376386 to 79376513 127 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 250
Tssr73097 7 79386707 to 79386762 55 - TSS region transcription start site region 73097
Tssr73098 7 79386785 to 79386796 11 - TSS region transcription start site region 73098
Tssr73099 7 79386841 to 79386867 26 - TSS region transcription start site region 73099
Tssr73100 7 79386906 to 79386930 24 - TSS region transcription start site region 73100
Tssr73101 7 79386943 to 79386981 38 - TSS region transcription start site region 73101
Tssr73102 7 79388033 to 79388059 26 - TSS region transcription start site region 73102
Cpgi19293 7 79391897 to 79392722 825 CpG island CpG island 19293
Tssr67345 7 79392305 to 79392346 41 + TSS region transcription start site region 67345
Fanci 7 79392312 to 79450265 57953 + protein coding gene Fanconi anemia, complementation group I
Gm31653 7 79396496 to 79399128 2632 - lncRNA gene predicted gene, 31653
Tssr67346 7 79398665 to 79398681 16 + TSS region transcription start site region 67346
Tssr67347 7 79399133 to 79399145 12 + TSS region transcription start site region 67347
Gm16017 7 79412310 to 79412517 207 - pseudogene predicted gene 16017
D7Jpk3 7 79433189 to 79433329 140 DNA segment DNA segment, Chr 7, Japan, Kominami 3
Polg 7 79448910 to 79466306 17396 - protein coding gene polymerase (DNA directed), gamma
Cpgi19294 7 79464612 to 79467201 2589 CpG island CpG island 19294
Tssr73103 7 79465502 to 79465512 10 - TSS region transcription start site region 73103
Tssr73104 7 79466012 to 79466028 16 - TSS region transcription start site region 73104
Tssr73105 7 79466127 to 79466136 9 - TSS region transcription start site region 73105
Tssr73106 7 79466167 to 79466240 73 - TSS region transcription start site region 73106
Gm10616 7 79466409 to 79468535 2126 + unclassified gene predicted gene 10616
n-TRtcg5 7 79466419 to 79466491 72 + tRNA gene nuclear encoded tRNA arginine 5 (anticodon TCG)
Tssr73107 7 79477362 to 79477390 28 - TSS region transcription start site region 73107
Cpgi19295 7 79495991 to 79496418 427 CpG island CpG island 19295
Cpgi19296 7 79499072 to 79500565 1493 CpG island CpG island 19296
Tssr67348 7 79499134 to 79499151 17 + TSS region transcription start site region 67348
Tssr67349 7 79499976 to 79499987 11 + TSS region transcription start site region 67349
Tssr67350 7 79500018 to 79500035 17 + TSS region transcription start site region 67350
Mir9-3hg 7 79500026 to 79534403 34377 + lincRNA gene Mir9-3 host gene
Tssr67351 7 79500045 to 79500066 21 + TSS region transcription start site region 67351
Tssr67352 7 79500081 to 79500095 14 + TSS region transcription start site region 67352
Cpgi19297 7 79504439 to 79505707 1268 CpG island CpG island 19297
Tssr73108 7 79504754 to 79504763 9 - TSS region transcription start site region 73108
Tssr67353 7 79504941 to 79504954 13 + TSS region transcription start site region 67353
Mir9-3 7 79505264 to 79505353 89 + miRNA gene microRNA 9-3
Tssr67354 7 79505336 to 79505347 11 + TSS region transcription start site region 67354
Cpgi19298 7 79505907 to 79506235 328 CpG island CpG island 19298
Cpgi19299 7 79508130 to 79509461 1331 CpG island CpG island 19299
A330074H02Rik 7 79510362 to 79511400 1038 + unclassified gene RIKEN cDNA A330074H02 gene
2900037B21Rik 7 79512924 to 79513260 336 + unclassified gene RIKEN cDNA 2900037B21 gene
Cpgi19300 7 79514619 to 79516000 1381 CpG island CpG island 19300
Gm37608 7 79516882 to 79518761 1879 + unclassified gene predicted gene, 37608
Cpgi19301 7 79535289 to 79536662 1373 CpG island CpG island 19301
Gm35040 7 79535737 to 79558537 22800 + lincRNA gene predicted gene, 35040
Tssr67355 7 79535997 to 79536061 64 + TSS region transcription start site region 67355
Tssr67356 7 79536141 to 79536166 25 + TSS region transcription start site region 67356
D7Mit213 7 79539293 to 79539432 139 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 213
Gm31740 7 79542837 to 79550625 7788 - lncRNA gene predicted gene, 31740
Cpgi19302 7 79543023 to 79544462 1439 CpG island CpG island 19302
Cpgi19303 7 79544663 to 79544902 239 CpG island CpG island 19303
Cpgi19304 7 79555734 to 79555962 228 CpG island CpG island 19304
Gm45168 7 79577755 to 79579079 1324 - lincRNA gene predicted gene 45168
Cpgi19305 7 79578057 to 79578227 170 CpG island CpG island 19305
Cpgi19306 7 79578815 to 79579196 381 CpG island CpG island 19306
Gm45169 7 79586648 to 79592613 5965 - lincRNA gene predicted gene 45169
Cpgi19307 7 79592558 to 79592883 325 CpG island CpG island 19307
Rhcg 7 79593363 to 79617657 24294 - protein coding gene Rhesus blood group-associated C glycoprotein
Tssr73109 7 79594991 to 79595009 18 - TSS region transcription start site region 73109
Tssr73110 7 79596559 to 79596569 10 - TSS region transcription start site region 73110
Tssr73111 7 79596684 to 79596698 14 - TSS region transcription start site region 73111
Tssr73112 7 79596880 to 79596892 12 - TSS region transcription start site region 73112
Gm45170 7 79602006 to 79603676 1670 - unclassified gene predicted gene 45170
Cpgi19308 7 79607530 to 79607823 293 CpG island CpG island 19308
Cpgi19309 7 79617255 to 79617872 617 CpG island CpG island 19309
Tssr73113 7 79617549 to 79617565 16 - TSS region transcription start site region 73113
Tssr73114 7 79617642 to 79617659 17 - TSS region transcription start site region 73114
Gm17840 7 79634704 to 79635956 1252 + pseudogene predicted gene, 17840
Cpgi19310 7 79659680 to 79661228 1548 CpG island CpG island 19310
Tssr67357 7 79660190 to 79660201 11 + TSS region transcription start site region 67357
Ticrr 7 79660196 to 79698148 37952 + protein coding gene TOPBP1-interacting checkpoint and replication regulator
Tssr67358 7 79660211 to 79660261 50 + TSS region transcription start site region 67358
D7Mit181 7 79671770 to 79671920 150 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 181
Tssr67359 7 79686497 to 79686501 4 + TSS region transcription start site region 67359
Tssr67360 7 79691879 to 79691887 8 + TSS region transcription start site region 67360
Kif7 7 79698098 to 79715720 17622 - protein coding gene kinesin family member 7
Cpgi19311 7 79709940 to 79711021 1081 CpG island CpG island 19311
9330171B17Rik 7 79710283 to 79712357 2074 + antisense lncRNA gene RIKEN cDNA 9330171B17 gene
Tssr67361 7 79710364 to 79710375 11 + TSS region transcription start site region 67361
Tssr67362 7 79710377 to 79710406 29 + TSS region transcription start site region 67362
Tssr67363 7 79710408 to 79710423 15 + TSS region transcription start site region 67363
Cpgi19312 7 79715176 to 79715884 708 CpG island CpG island 19312
Tssr73115 7 79715688 to 79715749 61 - TSS region transcription start site region 73115
Plin1 7 79721164 to 79732903 11739 - protein coding gene perilipin 1
Cpgi19313 7 79721200 to 79721834 634 CpG island CpG island 19313
Tssr73116 7 79721220 to 79721233 13 - TSS region transcription start site region 73116
Tssr73117 7 79721240 to 79721253 13 - TSS region transcription start site region 73117
Tssr73118 7 79721285 to 79721297 12 - TSS region transcription start site region 73118
Tssr73119 7 79732163 to 79732177 14 - TSS region transcription start site region 73119
Tssr73120 7 79732194 to 79732199 5 - TSS region transcription start site region 73120
Tssr73121 7 79732755 to 79732847 92 - TSS region transcription start site region 73121
Tssr73122 7 79732866 to 79732882 16 - TSS region transcription start site region 73122
Tssr73123 7 79732903 to 79732919 16 - TSS region transcription start site region 73123
Tssr73124 7 79733337 to 79733345 8 - TSS region transcription start site region 73124
Pex11a 7 79735957 to 79743126 7169 - protein coding gene peroxisomal biogenesis factor 11 alpha
Gm44706 7 79740678 to 79742016 1338 + antisense lncRNA gene predicted gene 44706
Cpgi19314 7 79742661 to 79743229 568 CpG island CpG island 19314
Tssr73125 7 79742967 to 79742976 9 - TSS region transcription start site region 73125
Tssr73126 7 79742985 to 79742996 11 - TSS region transcription start site region 73126
Tssr73127 7 79743015 to 79743033 18 - TSS region transcription start site region 73127
Tssr73128 7 79743034 to 79743088 54 - TSS region transcription start site region 73128
Tssr73129 7 79743104 to 79743113 9 - TSS region transcription start site region 73129
Tssr67364 7 79743142 to 79743169 27 + TSS region transcription start site region 67364
Wdr93 7 79743163 to 79785950 42787 + protein coding gene WD repeat domain 93
Tssr67365 7 79743170 to 79743187 17 + TSS region transcription start site region 67365
Tssr67366 7 79761373 to 79761377 4 + TSS region transcription start site region 67366
Tssr67367 7 79770518 to 79770523 5 + TSS region transcription start site region 67367
Gm44705 7 79790287 to 79790625 338 - pseudogene predicted gene 44705
Mesp1 7 79792241 to 79793590 1349 - protein coding gene mesoderm posterior 1
Cpgi19315 7 79792343 to 79793783 1440 CpG island CpG island 19315
Tssr73130 7 79793014 to 79793047 33 - TSS region transcription start site region 73130
Tssr73131 7 79793060 to 79793073 13 - TSS region transcription start site region 73131
Tssr73132 7 79793207 to 79793233 26 - TSS region transcription start site region 73132
Tssr73133 7 79793252 to 79793259 7 - TSS region transcription start site region 73133
Tssr73134 7 79801539 to 79801553 14 - TSS region transcription start site region 73134
Cpgi19316 7 79810594 to 79811725 1131 CpG island CpG island 19316
Mesp2 7 79810727 to 79813431 2704 + protein coding gene mesoderm posterior 2
Tssr67368 7 79811200 to 79811215 15 + TSS region transcription start site region 67368
Tssr67369 7 79811221 to 79811266 45 + TSS region transcription start site region 67369
Idd27 7 119886157 to 79376386 -40509771 QTL insulin dependent diabetes susceptibility 27