Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:78918483-79250099

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Isg20 7 78913424 to 78920396 6972 + protein coding gene interferon-stimulated protein
Tssr67322 7 78920128 to 78920140 12 + TSS region transcription start site region 67322
Tssr67323 7 78920146 to 78920157 11 + TSS region transcription start site region 67323
Tssr67324 7 78920174 to 78920198 24 + TSS region transcription start site region 67324
Tssr67325 7 78920214 to 78920234 20 + TSS region transcription start site region 67325
Gm44815 7 78922254 to 78923886 1632 - unclassified gene predicted gene 44815
Gm31213 7 78938946 to 78954525 15579 - lncRNA gene predicted gene, 31213
D7Mit93 7 78985153 to 78985278 125 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 93
Cpgi19287 7 78990275 to 78990696 421 CpG island CpG island 19287
D7Mit349 7 78999025 to 78999145 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 349
Gm26633 7 79018053 to 79053323 35270 - antisense lncRNA gene predicted gene, 26633
Cpgi19288 7 79052614 to 79053721 1107 CpG island CpG island 19288
Tssr67326 7 79053215 to 79053234 19 + TSS region transcription start site region 67326
Tssr67327 7 79053236 to 79053265 29 + TSS region transcription start site region 67327
Tssr67328 7 79053288 to 79053301 13 + TSS region transcription start site region 67328
Acan 7 79053483 to 79115099 61616 + protein coding gene aggrecan
Tssr67329 7 79084525 to 79084538 13 + TSS region transcription start site region 67329
Cpgi19289 7 79089653 to 79089935 282 CpG island CpG island 19289
Hapln3 7 79115102 to 79131018 15916 - protein coding gene hyaluronan and proteoglycan link protein 3
Cpgi19290 7 79130815 to 79131080 265 CpG island CpG island 19290
Mfge8 7 79133768 to 79149060 15292 - protein coding gene milk fat globule-EGF factor 8 protein
Tssr73089 7 79143301 to 79143327 26 - TSS region transcription start site region 73089
Tssr73090 7 79145295 to 79145315 20 - TSS region transcription start site region 73090
Tssr73091 7 79145361 to 79145384 23 - TSS region transcription start site region 73091
Cpgi19291 7 79148597 to 79149257 660 CpG island CpG island 19291
Tssr73092 7 79149015 to 79149029 14 - TSS region transcription start site region 73092
Tssr73093 7 79149042 to 79149062 20 - TSS region transcription start site region 73093
D7Dcr33 7 79214644 to 79214738 94 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 33
Gm39040 7 79243823 to 79247576 3753 - lncRNA gene predicted gene, 39040