Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:78843768-79439060

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104 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Det1 7 78822956 to 78847374 24418 - protein coding gene de-etiolated homolog 1 (Arabidopsis)
Cpgi19284 7 78846697 to 78847702 1005 CpG island CpG island 19284
Tssr73086 7 78847206 to 78847255 49 - TSS region transcription start site region 73086
1700011D18Rik 7 78847254 to 78847530 276 + lincRNA gene RIKEN cDNA 1700011D18 gene
Gm44730 7 78855488 to 78858442 2954 - lincRNA gene predicted gene 44730
D7Mit194.1 7 78867707 to 78867849 142 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 194.1
D7Mit194 7 78867825 to 78867970 145 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 194
Cpgi19285 7 78882429 to 78883501 1072 CpG island CpG island 19285
Tssr67305 7 78882619 to 78882634 15 + TSS region transcription start site region 67305
Tssr67306 7 78885619 to 78885651 32 + TSS region transcription start site region 67306
Mir7-2 7 78888277 to 78888373 96 + miRNA gene microRNA 7-2
Tssr67307 7 78888356 to 78888359 3 + TSS region transcription start site region 67307
Gm39039 7 78893775 to 78895782 2007 - lncRNA gene predicted gene, 39039
Cpgi19286 7 78895673 to 78896393 720 CpG island CpG island 19286
Tssr73087 7 78895732 to 78895739 7 - TSS region transcription start site region 73087
Tssr67308 7 78895903 to 78895990 87 + TSS region transcription start site region 67308
Aen 7 78895927 to 78908833 12906 + protein coding gene apoptosis enhancing nuclease
Tssr2306 7 78896008 to 78896016 8 + TSS region transcription start site region 2306
D7Ertd783e 7 78903569 to 78903816 247 DNA segment DNA segment, Chr 7, ERATO Doi 783, expressed
Tssr67309 7 78913401 to 78913428 27 + TSS region transcription start site region 67309
Isg20 7 78913424 to 78920396 6972 + protein coding gene interferon-stimulated protein
Tssr67310 7 78913436 to 78913448 12 + TSS region transcription start site region 67310
Tssr67311 7 78913786 to 78913791 5 + TSS region transcription start site region 67311
Tssr67312 7 78913794 to 78913864 70 + TSS region transcription start site region 67312
Tssr73088 7 78913866 to 78913895 29 - TSS region transcription start site region 73088
Tssr67313 7 78913891 to 78913902 11 + TSS region transcription start site region 67313
Tssr67314 7 78913909 to 78913918 9 + TSS region transcription start site region 67314
Tssr67315 7 78913926 to 78913949 23 + TSS region transcription start site region 67315
Tssr67316 7 78913951 to 78913991 40 + TSS region transcription start site region 67316
Tssr67317 7 78914010 to 78914021 11 + TSS region transcription start site region 67317
Tssr67318 7 78914216 to 78914294 78 + TSS region transcription start site region 67318
Tssr67319 7 78914314 to 78914334 20 + TSS region transcription start site region 67319
Tssr67320 7 78914526 to 78914535 9 + TSS region transcription start site region 67320
Tssr67321 7 78916654 to 78916688 34 + TSS region transcription start site region 67321
Tssr67322 7 78920128 to 78920140 12 + TSS region transcription start site region 67322
Tssr67323 7 78920146 to 78920157 11 + TSS region transcription start site region 67323
Tssr67324 7 78920174 to 78920198 24 + TSS region transcription start site region 67324
Tssr67325 7 78920214 to 78920234 20 + TSS region transcription start site region 67325
Gm44815 7 78922254 to 78923886 1632 - unclassified gene predicted gene 44815
Gm31213 7 78938946 to 78954525 15579 - lncRNA gene predicted gene, 31213
D7Mit93 7 78985153 to 78985278 125 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 93
Cpgi19287 7 78990275 to 78990696 421 CpG island CpG island 19287
D7Mit349 7 78999025 to 78999145 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 349
Gm26633 7 79018053 to 79053323 35270 - antisense lncRNA gene predicted gene, 26633
Cpgi19288 7 79052614 to 79053721 1107 CpG island CpG island 19288
Tssr67326 7 79053215 to 79053234 19 + TSS region transcription start site region 67326
Tssr67327 7 79053236 to 79053265 29 + TSS region transcription start site region 67327
Tssr67328 7 79053288 to 79053301 13 + TSS region transcription start site region 67328
Acan 7 79053483 to 79115099 61616 + protein coding gene aggrecan
Tssr67329 7 79084525 to 79084538 13 + TSS region transcription start site region 67329
Cpgi19289 7 79089653 to 79089935 282 CpG island CpG island 19289
Hapln3 7 79115102 to 79131018 15916 - protein coding gene hyaluronan and proteoglycan link protein 3
Cpgi19290 7 79130815 to 79131080 265 CpG island CpG island 19290
Mfge8 7 79133768 to 79149060 15292 - protein coding gene milk fat globule-EGF factor 8 protein
Tssr73089 7 79143301 to 79143327 26 - TSS region transcription start site region 73089
Tssr73090 7 79145295 to 79145315 20 - TSS region transcription start site region 73090
Tssr73091 7 79145361 to 79145384 23 - TSS region transcription start site region 73091
Cpgi19291 7 79148597 to 79149257 660 CpG island CpG island 19291
Tssr73092 7 79149015 to 79149029 14 - TSS region transcription start site region 73092
Tssr73093 7 79149042 to 79149062 20 - TSS region transcription start site region 73093
D7Dcr33 7 79214644 to 79214738 94 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 33
Gm39040 7 79243823 to 79247576 3753 - lncRNA gene predicted gene, 39040
Tssr2307 7 79261551 to 79261556 5 + TSS region transcription start site region 2307
Gm31510 7 79271688 to 79273035 1347 - bidirectional promoter lncRNA gene predicted gene, 31510
Cpgi19292 7 79273019 to 79273800 781 CpG island CpG island 19292
Tssr67330 7 79273214 to 79273225 11 + TSS region transcription start site region 67330
Tssr67331 7 79273248 to 79273270 22 + TSS region transcription start site region 67331
Abhd2 7 79273266 to 79361601 88335 + protein coding gene abhydrolase domain containing 2
Tssr67332 7 79273277 to 79273295 18 + TSS region transcription start site region 67332
Gm44639 7 79277767 to 79280775 3008 + unclassified gene predicted gene 44639
Tssr67333 7 79290565 to 79290570 5 + TSS region transcription start site region 67333
Tssr67334 7 79297015 to 79297048 33 + TSS region transcription start site region 67334
Tssr67335 7 79297105 to 79297139 34 + TSS region transcription start site region 67335
Gm39041 7 79298950 to 79302400 3450 + lncRNA gene predicted gene, 39041
Tssr67336 7 79299836 to 79299863 27 + TSS region transcription start site region 67336
Tssr73094 7 79300914 to 79300926 12 - TSS region transcription start site region 73094
Tssr73095 7 79300944 to 79300954 10 - TSS region transcription start site region 73095
Tssr73096 7 79300960 to 79300982 22 - TSS region transcription start site region 73096
Tssr67337 7 79308015 to 79308023 8 + TSS region transcription start site region 67337
Tssr67338 7 79323535 to 79323548 13 + TSS region transcription start site region 67338
Gm24224 7 79352488 to 79352745 257 - unclassified non-coding RNA gene predicted gene, 24224
Tssr67339 7 79360264 to 79360276 12 + TSS region transcription start site region 67339
Tssr67340 7 79361132 to 79361144 12 + TSS region transcription start site region 67340
Tssr67341 7 79363620 to 79363644 24 + TSS region transcription start site region 67341
Tssr67342 7 79364125 to 79364135 10 + TSS region transcription start site region 67342
Tssr67343 7 79364749 to 79364762 13 + TSS region transcription start site region 67343
Tssr67344 7 79365121 to 79365125 4 + TSS region transcription start site region 67344
Rlbp1 7 79374865 to 79387043 12178 - protein coding gene retinaldehyde binding protein 1
D7Mit250 7 79376386 to 79376513 127 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 250
Tssr73097 7 79386707 to 79386762 55 - TSS region transcription start site region 73097
Tssr73098 7 79386785 to 79386796 11 - TSS region transcription start site region 73098
Tssr73099 7 79386841 to 79386867 26 - TSS region transcription start site region 73099
Tssr73100 7 79386906 to 79386930 24 - TSS region transcription start site region 73100
Tssr73101 7 79386943 to 79386981 38 - TSS region transcription start site region 73101
Tssr73102 7 79388033 to 79388059 26 - TSS region transcription start site region 73102
Cpgi19293 7 79391897 to 79392722 825 CpG island CpG island 19293
Tssr67345 7 79392305 to 79392346 41 + TSS region transcription start site region 67345
Fanci 7 79392312 to 79450265 57953 + protein coding gene Fanconi anemia, complementation group I
Gm31653 7 79396496 to 79399128 2632 - lncRNA gene predicted gene, 31653
Tssr67346 7 79398665 to 79398681 16 + TSS region transcription start site region 67346
Tssr67347 7 79399133 to 79399145 12 + TSS region transcription start site region 67347
Gm16017 7 79412310 to 79412517 207 - pseudogene predicted gene 16017
D7Jpk3 7 79433189 to 79433329 140 DNA segment DNA segment, Chr 7, Japan, Kominami 3
Idd27 7 119886157 to 79376386 -40509771 QTL insulin dependent diabetes susceptibility 27