Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:75681442-78811625

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108 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbthq2 7 66010000 to 77900000 11890000 QTL trabecular bone thickness QTL 2
Akap13 7 75455534 to 75754609 299075 + protein coding gene A kinase (PRKA) anchor protein 13
Tssr67277 7 75684950 to 75684957 7 + TSS region transcription start site region 67277
Tssr67278 7 75697357 to 75697382 25 + TSS region transcription start site region 67278
Tssr67279 7 75698395 to 75698401 6 + TSS region transcription start site region 67279
Tssr67280 7 75701965 to 75702014 49 + TSS region transcription start site region 67280
Tssr67281 7 75702017 to 75702028 11 + TSS region transcription start site region 67281
Tssr67282 7 75703235 to 75703243 8 + TSS region transcription start site region 67282
Tssr67283 7 75703284 to 75703294 10 + TSS region transcription start site region 67283
Gm44694 7 75707885 to 75709182 1297 + unclassified gene predicted gene 44694
Tssr67284 7 75710325 to 75710329 4 + TSS region transcription start site region 67284
Tssr67285 7 75725962 to 75725974 12 + TSS region transcription start site region 67285
Tssr67286 7 75730518 to 75730530 12 + TSS region transcription start site region 67286
Tssr67287 7 75730537 to 75730549 12 + TSS region transcription start site region 67287
Tssr67288 7 75752360 to 75752384 24 + TSS region transcription start site region 67288
Tssr67289 7 75752592 to 75752605 13 + TSS region transcription start site region 67289
Tssr67290 7 75752718 to 75752749 31 + TSS region transcription start site region 67290
Tssr67291 7 75753448 to 75753489 41 + TSS region transcription start site region 67291
Tssr67292 7 75753516 to 75753526 10 + TSS region transcription start site region 67292
Gm23251 7 75757259 to 75757368 109 - miRNA gene predicted gene, 23251
AU020206 7 75769038 to 75782099 13061 - lincRNA gene expressed sequence AU020206
Tssr73052 7 75772891 to 75772929 38 - TSS region transcription start site region 73052
Tssr73053 7 75774066 to 75774073 7 - TSS region transcription start site region 73053
Tssr73054 7 75774111 to 75774122 11 - TSS region transcription start site region 73054
Tssr73055 7 75774133 to 75774157 24 - TSS region transcription start site region 73055
Tssr73056 7 75776606 to 75776625 19 - TSS region transcription start site region 73056
Tssr73057 7 75776786 to 75776792 6 - TSS region transcription start site region 73057
Tssr73058 7 75780263 to 75780304 41 - TSS region transcription start site region 73058
Tssr73059 7 75780327 to 75780409 82 - TSS region transcription start site region 73059
Tssr73060 7 75780419 to 75780431 12 - TSS region transcription start site region 73060
Tssr73061 7 75780506 to 75780528 22 - TSS region transcription start site region 73061
Tssr73062 7 75780544 to 75780555 11 - TSS region transcription start site region 73062
Tssr73063 7 75780745 to 75780757 12 - TSS region transcription start site region 73063
Tssr73064 7 75780759 to 75780770 11 - TSS region transcription start site region 73064
Tssr73065 7 75780771 to 75780794 23 - TSS region transcription start site region 73065
Cpgi19279 7 75781871 to 75782286 415 CpG island CpG island 19279
Tssr73066 7 75782080 to 75782126 46 - TSS region transcription start site region 73066
Gm26729 7 75784032 to 75784383 351 + pseudogene predicted gene, 26729
Tssr73067 7 75791078 to 75791082 4 - TSS region transcription start site region 73067
Cpgi19280 7 75848075 to 75849094 1019 CpG island CpG island 19280
Klhl25 7 75848338 to 75874130 25792 + protein coding gene kelch-like 25
Tssr67293 7 75848351 to 75848401 50 + TSS region transcription start site region 67293
D7Mit202 7 75875628 to 75875760 132 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 202
Gm45139 7 76000824 to 76002880 2056 + unclassified gene predicted gene 45139
Gm45211 7 76054094 to 76056743 2649 + unclassified gene predicted gene 45211
D7Mit348 7 76090105 to 76090381 276 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 348
Tssr67294 7 76229769 to 76229794 25 + TSS region transcription start site region 67294
Tssr67295 7 76229855 to 76229866 11 + TSS region transcription start site region 67295
Agbl1 7 76229887 to 77124698 894811 + protein coding gene ATP/GTP binding protein-like 1
Tssr73068 7 76237575 to 76237587 12 - TSS region transcription start site region 73068
Gm5597 7 76244746 to 76245938 1192 - pseudogene predicted gene 5597
Gm30774 7 76359707 to 76368660 8953 - lncRNA gene predicted gene, 30774
Gm33069 7 76375159 to 76376621 1462 - pseudogene predicted gene, 33069
D7Mit279 7 76453548 to 76453665 117 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 279
D7Dcr31 7 76453551 to 76453653 102 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 31
Tssr67296 7 76457285 to 76457288 3 + TSS region transcription start site region 67296
2310001K20Rik 7 76611065 to 76612015 950 + unclassified gene RIKEN cDNA 2310001K20 gene
Gm45210 7 76698141 to 76699717 1576 - unclassified gene predicted gene 45210
D7Jpk4 7 77246442 to 77246625 183 DNA segment DNA segment, Chr 7, Japan, Kominami 4
D7Mit212 7 77285540 to 77285689 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 212
Gm44879 7 77298494 to 77298996 502 - pseudogene predicted gene 44879
Gm44608 7 77412573 to 77413427 854 + unclassified gene predicted gene 44608
D7Dcr32 7 77634337 to 77634437 100 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 32
Gm18674 7 77776032 to 77776777 745 + pseudogene predicted gene, 18674
Gm23239 7 77910140 to 77910320 180 - snRNA gene predicted gene, 23239
Tssr67297 7 78019129 to 78019134 5 + TSS region transcription start site region 67297
Gm44358 7 78026543 to 78026640 97 - miRNA gene predicted gene, 44358
Tssr67298 7 78077617 to 78077618 1 + TSS region transcription start site region 67298
Gm46012 7 78161949 to 78165423 3474 - pseudogene predicted gene, 46012
A330068G13Rik 7 78175969 to 78179265 3296 unclassified non-coding RNA gene RIKEN cDNA A330068G13 gene
Ntrk3 7 78179986 to 78579180 399194 - protein coding gene neurotrophic tyrosine kinase, receptor, type 3
Tssr73069 7 78192530 to 78192550 20 - TSS region transcription start site region 73069
Tssr73070 7 78192565 to 78192577 12 - TSS region transcription start site region 73070
Gm44607 7 78211610 to 78212699 1089 - unclassified gene predicted gene 44607
4921513I08Rik 7 78254296 to 78255421 1125 + antisense lncRNA gene RIKEN cDNA 4921513I08 gene
Tssr73071 7 78432596 to 78432600 4 - TSS region transcription start site region 73071
Tssr73072 7 78451705 to 78451707 2 - TSS region transcription start site region 73072
D7Mit214 7 78556370 to 78556505 135 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 214
Gm39038 7 78560635 to 78575232 14597 - sense intronic lncRNA gene predicted gene, 39038
Cpgi19281 7 78576935 to 78579363 2428 CpG island CpG island 19281
Tssr73073 7 78577771 to 78577828 57 - TSS region transcription start site region 73073
Tssr73074 7 78578134 to 78578154 20 - TSS region transcription start site region 73074
Tssr73075 7 78578308 to 78578400 92 - TSS region transcription start site region 73075
Tssr67299 7 78578557 to 78578586 29 + TSS region transcription start site region 67299
Gm9885 7 78578830 to 78581038 2208 + antisense lncRNA gene predicted gene 9885
Tssr73076 7 78578962 to 78578987 25 - TSS region transcription start site region 73076
E430016F16Rik 7 78581066 to 78718220 137154 - lncRNA gene RIKEN cDNA E430016F16 gene
Tssr73077 7 78623323 to 78623343 20 - TSS region transcription start site region 73077
Tssr73078 7 78627457 to 78627461 4 - TSS region transcription start site region 73078
Tssr73079 7 78628001 to 78628002 1 - TSS region transcription start site region 73079
Cpgi19282 7 78669524 to 78669767 243 CpG island CpG island 19282
D7Mit366 7 78684196 to 78684340 144 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 366
Tssr67300 7 78718378 to 78718400 22 + TSS region transcription start site region 67300
Tssr67301 7 78719368 to 78719379 11 + TSS region transcription start site region 67301
Tssr67302 7 78719422 to 78719449 27 + TSS region transcription start site region 67302
Tssr73080 7 78721331 to 78721336 5 - TSS region transcription start site region 73080
Gm30892 7 78727473 to 78734644 7171 - lncRNA gene predicted gene, 30892
Tssr73081 7 78736102 to 78736106 4 - TSS region transcription start site region 73081
Tssr73082 7 78737228 to 78737232 4 - TSS region transcription start site region 73082
Tssr73083 7 78738003 to 78738029 26 - TSS region transcription start site region 73083
Mrpl46 7 78775341 to 78783089 7748 - protein coding gene mitochondrial ribosomal protein L46
Gm45059 7 78777290 to 78778366 1076 - unclassified gene predicted gene 45059
Cpgi19283 7 78782736 to 78783141 405 CpG island CpG island 19283
Tssr73084 7 78783026 to 78783057 31 - TSS region transcription start site region 73084
Mrps11 7 78783131 to 78792989 9858 + protein coding gene mitochondrial ribosomal protein S11
Tssr2305 7 78783298 to 78783302 4 + TSS region transcription start site region 2305
Tssr67303 7 78783303 to 78783341 38 + TSS region transcription start site region 67303
Tssr67304 7 78783343 to 78783367 24 + TSS region transcription start site region 67304