Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:73934727-75504916

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128 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
St8sia2 7 73939119 to 74013690 74571 - protein coding gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
Tssr72978 7 73939992 to 73940019 27 - TSS region transcription start site region 72978
Tssr72979 7 73940033 to 73940044 11 - TSS region transcription start site region 72979
Tssr72980 7 73940065 to 73940090 25 - TSS region transcription start site region 72980
Tssr72981 7 73940318 to 73940331 13 - TSS region transcription start site region 72981
Tssr72982 7 73940420 to 73940435 15 - TSS region transcription start site region 72982
Tssr72983 7 73940499 to 73940510 11 - TSS region transcription start site region 72983
Tssr72984 7 73940522 to 73940532 10 - TSS region transcription start site region 72984
Tssr72985 7 73941586 to 73941591 5 - TSS region transcription start site region 72985
Tssr72986 7 73942448 to 73942477 29 - TSS region transcription start site region 72986
Gm45003 7 73945377 to 73947534 2157 - unclassified gene predicted gene 45003
Gm38143 7 73948423 to 73958042 9619 + unclassified non-coding RNA gene predicted gene, 38143
D7Dcr30 7 73948935 to 73949105 170 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 30
D7Mit318 7 73948962 to 73949111 149 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 318
Cpgi19272 7 73960647 to 73960928 281 CpG island CpG island 19272
Tssr72987 7 73964131 to 73964154 23 - TSS region transcription start site region 72987
Tssr72988 7 73996376 to 73996385 9 - TSS region transcription start site region 72988
Cpgi19273 7 74012361 to 74014290 1929 CpG island CpG island 19273
Tssr72989 7 74013635 to 74013667 32 - TSS region transcription start site region 72989
Tssr72990 7 74013676 to 74013699 23 - TSS region transcription start site region 72990
Gm45004 7 74034632 to 74043738 9106 - lincRNA gene predicted gene 45004
Tssr72991 7 74065545 to 74065556 11 - TSS region transcription start site region 72991
Tssr67229 7 74220179 to 74220184 5 + TSS region transcription start site region 67229
Gm27459 7 74235558 to 74235664 106 + miRNA gene predicted gene, 27459
Slco3a1 7 74275419 to 74554780 279361 - protein coding gene solute carrier organic anion transporter family, member 3a1
Tssr72992 7 74284266 to 74284281 15 - TSS region transcription start site region 72992
Tssr72993 7 74284344 to 74284356 12 - TSS region transcription start site region 72993
Tssr72994 7 74284373 to 74284387 14 - TSS region transcription start site region 72994
Tssr72995 7 74285942 to 74285957 15 - TSS region transcription start site region 72995
Tssr72996 7 74302543 to 74302559 16 - TSS region transcription start site region 72996
Tssr72997 7 74302590 to 74302601 11 - TSS region transcription start site region 72997
Tssr72998 7 74302707 to 74302748 41 - TSS region transcription start site region 72998
Tssr72999 7 74302781 to 74302787 6 - TSS region transcription start site region 72999
Tssr73000 7 74302891 to 74302896 5 - TSS region transcription start site region 73000
Tssr73001 7 74303260 to 74303284 24 - TSS region transcription start site region 73001
D7Mit201 7 74321745 to 74321894 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 201
Tssr73002 7 74342134 to 74342146 12 - TSS region transcription start site region 73002
Tssr73003 7 74346955 to 74346980 25 - TSS region transcription start site region 73003
D7Mit147 7 74359380 to 74359462 82 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 147
Tssr73004 7 74367137 to 74367151 14 - TSS region transcription start site region 73004
Tssr73005 7 74382290 to 74382305 15 - TSS region transcription start site region 73005
Gm7580 7 74392698 to 74411233 18535 + antisense lncRNA gene predicted gene 7580
Tssr73006 7 74399887 to 74399898 11 - TSS region transcription start site region 73006
Tssr73007 7 74408504 to 74408509 5 - TSS region transcription start site region 73007
Tssr67230 7 74411619 to 74411648 29 + TSS region transcription start site region 67230
Tssr73008 7 74428162 to 74428167 5 - TSS region transcription start site region 73008
Tssr73009 7 74430248 to 74430257 9 - TSS region transcription start site region 73009
Tssr73010 7 74448344 to 74448379 35 - TSS region transcription start site region 73010
Tssr73011 7 74473322 to 74473331 9 - TSS region transcription start site region 73011
Tssr73012 7 74482118 to 74482132 14 - TSS region transcription start site region 73012
Tssr73013 7 74492646 to 74492673 27 - TSS region transcription start site region 73013
Tssr73014 7 74501099 to 74501126 27 - TSS region transcription start site region 73014
Tssr73015 7 74502156 to 74502160 4 - TSS region transcription start site region 73015
Cpgi19274 7 74504145 to 74504740 595 CpG island CpG island 19274
Tssr67231 7 74529487 to 74529492 5 + TSS region transcription start site region 67231
A430057L12Rik 7 74542825 to 74544112 1287 unclassified gene RIKEN cDNA A430057L12 gene
Tssr73016 7 74542932 to 74542974 42 - TSS region transcription start site region 73016
Tssr73017 7 74543274 to 74543302 28 - TSS region transcription start site region 73017
Tssr73018 7 74543668 to 74543676 8 - TSS region transcription start site region 73018
Tssr73019 7 74549451 to 74549455 4 - TSS region transcription start site region 73019
Cpgi19275 7 74553887 to 74555652 1765 CpG island CpG island 19275
Tssr73020 7 74554632 to 74554681 49 - TSS region transcription start site region 73020
Gm10618 7 74554722 to 74556720 1998 lncRNA gene predicted gene 10618
Tssr73021 7 74554726 to 74554791 65 - TSS region transcription start site region 73021
Tssr73022 7 74555105 to 74555150 45 - TSS region transcription start site region 73022
Tssr73023 7 74555157 to 74555180 23 - TSS region transcription start site region 73023
Tssr73024 7 74555182 to 74555196 14 - TSS region transcription start site region 73024
D7Mit182 7 74576845 to 74576993 148 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 182
Gm39037 7 74626250 to 74627514 1264 + lncRNA gene predicted gene, 39037
D7Mit92 7 74652465 to 74652622 157 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 92
Png1 7 74676373 to 92745138 18068765 QTL Postnatal growth 1
Egrm3 7 74676373 to 74676604 231 QTL early growth rate, maternal effect 3
Skull9 7 74676373 to 74676604 231 QTL skull morphology 9
D7Nds1 7 74676373 to 74676604 231 DNA segment DNA segment, Chr 7, Nuffield Department of Surgery 1
Hcs1 7 74676373 to 74676604 231 QTL hepatocarcinogenesis susceptibility 1
Gm30384 7 74696025 to 74719265 23240 - lncRNA gene predicted gene, 30384
Gm7726 7 74699856 to 74700086 230 + pseudogene predicted gene 7726
Gm18309 7 74714193 to 74714831 638 - pseudogene predicted gene, 18309
Tssr73025 7 74719274 to 74719287 13 - TSS region transcription start site region 73025
Cpgi19276 7 74719727 to 74719916 189 CpG island CpG island 19276
Gm30459 7 74765987 to 74771243 5256 + lincRNA gene predicted gene, 30459
0610006L08Rik 7 74818818 to 74853813 34995 - lincRNA gene RIKEN cDNA 0610006L08 gene
Gm44903 7 74851269 to 74851398 129 - pseudogene predicted gene 44903
Tssr73026 7 74853805 to 74853837 32 - TSS region transcription start site region 73026
Gm44902 7 74886264 to 74887068 804 + pseudogene predicted gene 44902
Gm22326 7 74962347 to 74962697 350 - unclassified non-coding RNA gene predicted gene, 22326
4930533N22Rik 7 75030211 to 75075166 44955 + lincRNA gene RIKEN cDNA 4930533N22 gene
Tssr67232 7 75060690 to 75060694 4 + TSS region transcription start site region 67232
Sv2b 7 75114894 to 75309262 194368 - protein coding gene synaptic vesicle glycoprotein 2 b
Tssr73027 7 75199276 to 75199279 3 - TSS region transcription start site region 73027
D7Mit251 7 75231344 to 75231482 138 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 251
D7Mit122 7 75231344 to 75231467 123 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 122
D7Nds2 7 75231350 to 75231464 114 DNA segment DNA segment, Chr 7, Nuffield Department of Surgery 2
D7Nds3 7 75231352 to 75231466 114 DNA segment DNA segment, Chr 7, Nuffield Department of Surgery 3
Gm24858 7 75275089 to 75275411 322 + unclassified non-coding RNA gene predicted gene, 24858
Tssr73028 7 75307722 to 75307736 14 - TSS region transcription start site region 73028
Tssr73029 7 75308279 to 75308338 59 - TSS region transcription start site region 73029
Tssr73030 7 75308356 to 75308370 14 - TSS region transcription start site region 73030
Tssr73031 7 75308373 to 75308384 11 - TSS region transcription start site region 73031
Tssr73032 7 75308409 to 75308419 10 - TSS region transcription start site region 73032
Cpgi19277 7 75308441 to 75309128 687 CpG island CpG island 19277
1500012K07Rik 7 75308696 to 75331419 22723 + lncRNA gene RIKEN cDNA 1500012K07 gene
Tssr73033 7 75308917 to 75308939 22 - TSS region transcription start site region 73033
Tssr73034 7 75308948 to 75308957 9 - TSS region transcription start site region 73034
Tssr73035 7 75308977 to 75308980 3 - TSS region transcription start site region 73035
Tssr73036 7 75309017 to 75309018 1 - TSS region transcription start site region 73036
Tssr73037 7 75309026 to 75309052 26 - TSS region transcription start site region 73037
Tssr73038 7 75309130 to 75309153 23 - TSS region transcription start site region 73038
Tssr73039 7 75309154 to 75309172 18 - TSS region transcription start site region 73039
Tssr73040 7 75309188 to 75309199 11 - TSS region transcription start site region 73040
Tssr73041 7 75309277 to 75309289 12 - TSS region transcription start site region 73041
Tssr73042 7 75309297 to 75309309 12 - TSS region transcription start site region 73042
Gm10161 7 75366055 to 75366258 203 + pseudogene predicted pseudogene 10161
Tssr73043 7 75372140 to 75372143 3 - TSS region transcription start site region 73043
Gm44962 7 75420857 to 75421135 278 - pseudogene predicted gene 44962
Gm46017 7 75427080 to 75437437 10357 - lncRNA gene predicted gene, 46017
Cpgi19278 7 75455199 to 75456345 1146 CpG island CpG island 19278
Tssr73044 7 75455383 to 75455398 15 - TSS region transcription start site region 73044
Akap13 7 75455534 to 75754609 299075 + protein coding gene A kinase (PRKA) anchor protein 13
Tssr2304 7 75455535 to 75455542 7 + TSS region transcription start site region 2304
Tssr67233 7 75455547 to 75455629 82 + TSS region transcription start site region 67233
Tssr67234 7 75455637 to 75455646 9 + TSS region transcription start site region 67234
Tssr67235 7 75457330 to 75457342 12 + TSS region transcription start site region 67235
Tssr67236 7 75457386 to 75457390 4 + TSS region transcription start site region 67236
Tssr67237 7 75475087 to 75475090 3 + TSS region transcription start site region 67237
Gm44834 7 75481999 to 75483394 1395 + unclassified gene predicted gene 44834
Gm44695 7 75484861 to 75486491 1630 + unclassified gene predicted gene 44695
Tssr73045 7 75498640 to 75498649 9 - TSS region transcription start site region 73045