Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:73110248-75750257

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329 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr67185 7 73112325 to 73112341 16 + TSS region transcription start site region 67185
4933435G04Rik 7 73124451 to 73126558 2107 + lincRNA gene RIKEN cDNA 4933435G04 gene
Tssr67186 7 73127868 to 73127878 10 + TSS region transcription start site region 67186
Gm28746 7 73185014 to 73185393 379 - lincRNA gene predicted gene 28746
Gm20083 7 73185744 to 73189446 3702 + lincRNA gene predicted gene, 20083
Tssr67187 7 73185766 to 73185775 9 + TSS region transcription start site region 67187
Tssr67188 7 73185798 to 73185809 11 + TSS region transcription start site region 67188
Gm30075 7 73202775 to 73238531 35756 - lincRNA gene predicted gene, 30075
Powg 7 73207357 to 92932955 19725598 QTL post-ovarectomy weight gain
Tssr72934 7 73238645 to 73238662 17 - TSS region transcription start site region 72934
Tssr67189 7 73255965 to 73255997 32 + TSS region transcription start site region 67189
Cpgi19259 7 73310323 to 73310826 503 CpG island CpG island 19259
4930429H19Rik 7 73310380 to 73315193 4813 + lincRNA gene RIKEN cDNA 4930429H19 gene
Tssr72935 7 73310944 to 73310956 12 - TSS region transcription start site region 72935
A730056A06Rik 7 73314003 to 73375774 61771 - antisense lncRNA gene RIKEN cDNA A730056A06 gene
Cpgi19260 7 73323243 to 73323394 151 CpG island CpG island 19260
Cpgi19261 7 73372328 to 73372700 372 CpG island CpG island 19261
Cpgi19262 7 73374918 to 73376455 1537 CpG island CpG island 19262
Tssr67190 7 73375480 to 73375492 12 + TSS region transcription start site region 67190
Tssr67191 7 73375494 to 73375549 55 + TSS region transcription start site region 67191
Rgma 7 73375520 to 73419899 44379 + protein coding gene repulsive guidance molecule family member A
Tssr67192 7 73375566 to 73375578 12 + TSS region transcription start site region 67192
Tssr67193 7 73375585 to 73375597 12 + TSS region transcription start site region 67193
Tssr72936 7 73375722 to 73375744 22 - TSS region transcription start site region 72936
Tssr67194 7 73375814 to 73375833 19 + TSS region transcription start site region 67194
Tssr67195 7 73375840 to 73375856 16 + TSS region transcription start site region 67195
Cpgi19263 7 73390690 to 73392019 1329 CpG island CpG island 19263
Tssr67196 7 73391240 to 73391296 56 + TSS region transcription start site region 67196
Cpgi19264 7 73399726 to 73400104 378 CpG island CpG island 19264
Gm44758 7 73404350 to 73406417 2067 + unclassified gene predicted gene 44758
Cpgi19265 7 73409186 to 73409566 380 CpG island CpG island 19265
Tssr67197 7 73409383 to 73409394 11 + TSS region transcription start site region 67197
Tssr67198 7 73409571 to 73409578 7 + TSS region transcription start site region 67198
Tssr67199 7 73418286 to 73418289 3 + TSS region transcription start site region 67199
Tssr67200 7 73418439 to 73418468 29 + TSS region transcription start site region 67200
Tssr67201 7 73418625 to 73418638 13 + TSS region transcription start site region 67201
Gm44645 7 73422250 to 73423902 1652 + unclassified gene predicted gene 44645
Tssr72937 7 73422539 to 73422540 1 - TSS region transcription start site region 72937
Chd2 7 73426652 to 73541746 115094 - protein coding gene chromodomain helicase DNA binding protein 2
Tssr72938 7 73455528 to 73455532 4 - TSS region transcription start site region 72938
Gm44553 7 73458597 to 73460633 2036 - unclassified gene predicted gene 44553
Tssr72939 7 73464238 to 73464242 4 - TSS region transcription start site region 72939
Tssr72940 7 73466098 to 73466108 10 - TSS region transcription start site region 72940
Tssr72941 7 73476103 to 73476107 4 - TSS region transcription start site region 72941
Gm44552 7 73498002 to 73499248 1246 - unclassified gene predicted gene 44552
Tssr72942 7 73502628 to 73502632 4 - TSS region transcription start site region 72942
Tssr72943 7 73515768 to 73515788 20 - TSS region transcription start site region 72943
Tssr72944 7 73517521 to 73517534 13 - TSS region transcription start site region 72944
Tssr72945 7 73519514 to 73519568 54 - TSS region transcription start site region 72945
C130083A15Rik 7 73527266 to 73528725 1459 - unclassified gene RIKEN cDNA C130083A15 gene
Tssr72946 7 73532272 to 73532276 4 - TSS region transcription start site region 72946
Cpgi19266 7 73537526 to 73538158 632 CpG island CpG island 19266
Tssr72947 7 73537687 to 73537766 79 - TSS region transcription start site region 72947
Tssr67202 7 73537947 to 73537970 23 + TSS region transcription start site region 67202
Tssr67203 7 73538011 to 73538058 47 + TSS region transcription start site region 67203
Gm44686 7 73538013 to 73554801 16788 + antisense lncRNA gene predicted gene 44686
Tssr67204 7 73538064 to 73538092 28 + TSS region transcription start site region 67204
Tssr72948 7 73539260 to 73539273 13 - TSS region transcription start site region 72948
Tssr67205 7 73539364 to 73539378 14 + TSS region transcription start site region 67205
1810026B05Rik 7 73539798 to 73558395 18597 - lncRNA gene RIKEN cDNA 1810026B05 gene
Tssr72949 7 73540888 to 73540919 31 - TSS region transcription start site region 72949
Tssr72950 7 73541085 to 73541121 36 - TSS region transcription start site region 72950
Tssr72951 7 73541425 to 73541432 7 - TSS region transcription start site region 72951
Tssr72952 7 73541496 to 73541505 9 - TSS region transcription start site region 72952
Tssr72953 7 73541719 to 73541737 18 - TSS region transcription start site region 72953
Tssr72954 7 73541738 to 73541758 20 - TSS region transcription start site region 72954
Tssr72955 7 73541823 to 73541829 6 - TSS region transcription start site region 72955
Tssr72956 7 73543626 to 73543656 30 - TSS region transcription start site region 72956
Tssr72957 7 73545643 to 73545647 4 - TSS region transcription start site region 72957
Tssr72958 7 73546094 to 73546098 4 - TSS region transcription start site region 72958
Tssr72959 7 73550364 to 73550397 33 - TSS region transcription start site region 72959
Tssr72960 7 73550654 to 73550668 14 - TSS region transcription start site region 72960
Tssr72961 7 73552066 to 73552086 20 - TSS region transcription start site region 72961
Tssr72962 7 73554977 to 73554992 15 - TSS region transcription start site region 72962
Tssr72963 7 73556693 to 73556702 9 - TSS region transcription start site region 72963
Tssr72964 7 73556708 to 73556732 24 - TSS region transcription start site region 72964
Tssr67206 7 73556823 to 73556838 15 + TSS region transcription start site region 67206
Cpgi19267 7 73557561 to 73558989 1428 CpG island CpG island 19267
Tssr72965 7 73557903 to 73557940 37 - TSS region transcription start site region 72965
Tssr72966 7 73557945 to 73557966 21 - TSS region transcription start site region 72966
Tssr72967 7 73558387 to 73558405 18 - TSS region transcription start site region 72967
Tssr72968 7 73558487 to 73558534 47 - TSS region transcription start site region 72968
Tssr67207 7 73558827 to 73558884 57 + TSS region transcription start site region 67207
Tssr2303 7 73558924 to 73558927 3 + TSS region transcription start site region 2303
Gm30149 7 73583285 to 73608740 25455 - lncRNA gene predicted gene, 30149
Tssr67208 7 73584258 to 73584267 9 + TSS region transcription start site region 67208
D7Mit146 7 73584920 to 73585069 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 146
Tssr67209 7 73586475 to 73586494 19 + TSS region transcription start site region 67209
Tssr72969 7 73595158 to 73595187 29 - TSS region transcription start site region 72969
Cpgi19268 7 73595253 to 73595465 212 CpG island CpG island 19268
Tssr67210 7 73595572 to 73595584 12 + TSS region transcription start site region 67210
Tssr72970 7 73596244 to 73596275 31 - TSS region transcription start site region 72970
Tssr72971 7 73597330 to 73597360 30 - TSS region transcription start site region 72971
Gm39036 7 73602798 to 73604109 1311 + lncRNA gene predicted gene, 39036
Cpgi19269 7 73606869 to 73607117 248 CpG island CpG island 19269
Tssr67211 7 73608937 to 73608974 37 + TSS region transcription start site region 67211
Gm44734 7 73608948 to 73614625 5677 + lincRNA gene predicted gene 44734
Tssr72972 7 73612656 to 73612690 34 - TSS region transcription start site region 72972
Tssr67212 7 73617286 to 73617343 57 + TSS region transcription start site region 67212
Gm7710 7 73617388 to 73619702 2314 - unclassified gene predicted gene 7710
Tssr72973 7 73617661 to 73617708 47 - TSS region transcription start site region 72973
Cpgi19270 7 73617891 to 73619039 1148 CpG island CpG island 19270
Tssr67213 7 73617970 to 73618001 31 + TSS region transcription start site region 67213
Tssr67214 7 73618017 to 73618028 11 + TSS region transcription start site region 67214
Tssr67215 7 73618695 to 73618709 14 + TSS region transcription start site region 67215
Tssr67216 7 73618722 to 73618752 30 + TSS region transcription start site region 67216
Tssr67217 7 73618819 to 73618824 5 + TSS region transcription start site region 67217
Tssr67218 7 73618899 to 73618941 42 + TSS region transcription start site region 67218
Tssr67219 7 73620583 to 73620586 3 + TSS region transcription start site region 67219
Gm44738 7 73626701 to 73627435 734 - lincRNA gene predicted gene 44738
Gm44737 7 73630617 to 73638088 7471 + lincRNA gene predicted gene 44737
Tssr67220 7 73640747 to 73640749 2 + TSS region transcription start site region 67220
Gm26176 7 73645985 to 73646089 104 - snRNA gene predicted gene, 26176
Gm23020 7 73662048 to 73662300 252 + unclassified non-coding RNA gene predicted gene, 23020
Gm44736 7 73670299 to 73672390 2091 - lincRNA gene predicted gene 44736
Gm44739 7 73676880 to 73678305 1425 - lincRNA gene predicted gene 44739
Gm4971 7 73685492 to 73686563 1071 - pseudogene predicted gene 4971
Tssr72974 7 73686596 to 73686600 4 - TSS region transcription start site region 72974
Tssr67221 7 73687168 to 73687174 6 + TSS region transcription start site region 67221
Gm18805 7 73688235 to 73688842 607 - pseudogene predicted gene, 18805
Gm45007 7 73706175 to 73706540 365 - pseudogene predicted gene 45007
A830073O21Rik 7 73737929 to 73741024 3095 - unclassified gene RIKEN cDNA A830073O21 gene
Cpgi19271 7 73740039 to 73741105 1066 CpG island CpG island 19271
Tssr67222 7 73740277 to 73740333 56 + TSS region transcription start site region 67222
Fam174b 7 73740307 to 73776919 36612 + protein coding gene family with sequence similarity 174, member B
Tssr67223 7 73740335 to 73740402 67 + TSS region transcription start site region 67223
Tssr67224 7 73740421 to 73740430 9 + TSS region transcription start site region 67224
Gm45005 7 73754589 to 73754745 156 + unclassified gene predicted gene 45005
Tssr67225 7 73772044 to 73772046 2 + TSS region transcription start site region 67225
Gm30236 7 73780524 to 73784153 3629 + lncRNA gene predicted gene, 30236
Tssr72975 7 73788342 to 73788359 17 - TSS region transcription start site region 72975
Gm18673 7 73788437 to 73789118 681 + pseudogene predicted gene, 18673
Gm45006 7 73797603 to 73798292 689 - unclassified gene predicted gene 45006
Gm10619 7 73808222 to 73816503 8281 - lincRNA gene predicted gene 10619
Tssr72976 7 73816446 to 73816453 7 - TSS region transcription start site region 72976
Tssr72977 7 73816462 to 73816480 18 - TSS region transcription start site region 72977
Tssr67226 7 73816568 to 73816579 11 + TSS region transcription start site region 67226
Tssr67227 7 73816584 to 73816600 16 + TSS region transcription start site region 67227
Mir7234 7 73819590 to 73819641 51 + miRNA gene microRNA 7234
Gm21269 7 73825924 to 73836549 10625 + lincRNA gene predicted gene, 21269
Gm18257 7 73830152 to 73832807 2655 + pseudogene predicted gene, 18257
Tssr67228 7 73852427 to 73852450 23 + TSS region transcription start site region 67228
St8sia2 7 73939119 to 74013690 74571 - protein coding gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
Tssr72978 7 73939992 to 73940019 27 - TSS region transcription start site region 72978
Tssr72979 7 73940033 to 73940044 11 - TSS region transcription start site region 72979
Tssr72980 7 73940065 to 73940090 25 - TSS region transcription start site region 72980
Tssr72981 7 73940318 to 73940331 13 - TSS region transcription start site region 72981
Tssr72982 7 73940420 to 73940435 15 - TSS region transcription start site region 72982
Tssr72983 7 73940499 to 73940510 11 - TSS region transcription start site region 72983
Tssr72984 7 73940522 to 73940532 10 - TSS region transcription start site region 72984
Tssr72985 7 73941586 to 73941591 5 - TSS region transcription start site region 72985
Tssr72986 7 73942448 to 73942477 29 - TSS region transcription start site region 72986
Gm45003 7 73945377 to 73947534 2157 - unclassified gene predicted gene 45003
Gm38143 7 73948423 to 73958042 9619 + unclassified non-coding RNA gene predicted gene, 38143
D7Dcr30 7 73948935 to 73949105 170 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 30
D7Mit318 7 73948962 to 73949111 149 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 318
Cpgi19272 7 73960647 to 73960928 281 CpG island CpG island 19272
Tssr72987 7 73964131 to 73964154 23 - TSS region transcription start site region 72987
Tssr72988 7 73996376 to 73996385 9 - TSS region transcription start site region 72988
Cpgi19273 7 74012361 to 74014290 1929 CpG island CpG island 19273
Tssr72989 7 74013635 to 74013667 32 - TSS region transcription start site region 72989
Tssr72990 7 74013676 to 74013699 23 - TSS region transcription start site region 72990
Gm45004 7 74034632 to 74043738 9106 - lincRNA gene predicted gene 45004
Tssr72991 7 74065545 to 74065556 11 - TSS region transcription start site region 72991
Tssr67229 7 74220179 to 74220184 5 + TSS region transcription start site region 67229
Gm27459 7 74235558 to 74235664 106 + miRNA gene predicted gene, 27459
Slco3a1 7 74275419 to 74554780 279361 - protein coding gene solute carrier organic anion transporter family, member 3a1
Tssr72992 7 74284266 to 74284281 15 - TSS region transcription start site region 72992
Tssr72993 7 74284344 to 74284356 12 - TSS region transcription start site region 72993
Tssr72994 7 74284373 to 74284387 14 - TSS region transcription start site region 72994
Tssr72995 7 74285942 to 74285957 15 - TSS region transcription start site region 72995
Tssr72996 7 74302543 to 74302559 16 - TSS region transcription start site region 72996
Tssr72997 7 74302590 to 74302601 11 - TSS region transcription start site region 72997
Tssr72998 7 74302707 to 74302748 41 - TSS region transcription start site region 72998
Tssr72999 7 74302781 to 74302787 6 - TSS region transcription start site region 72999
Tssr73000 7 74302891 to 74302896 5 - TSS region transcription start site region 73000
Tssr73001 7 74303260 to 74303284 24 - TSS region transcription start site region 73001
D7Mit201 7 74321745 to 74321894 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 201
Tssr73002 7 74342134 to 74342146 12 - TSS region transcription start site region 73002
Tssr73003 7 74346955 to 74346980 25 - TSS region transcription start site region 73003
D7Mit147 7 74359380 to 74359462 82 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 147
Tssr73004 7 74367137 to 74367151 14 - TSS region transcription start site region 73004
Tssr73005 7 74382290 to 74382305 15 - TSS region transcription start site region 73005
Gm7580 7 74392698 to 74411233 18535 + antisense lncRNA gene predicted gene 7580
Tssr73006 7 74399887 to 74399898 11 - TSS region transcription start site region 73006
Tssr73007 7 74408504 to 74408509 5 - TSS region transcription start site region 73007
Tssr67230 7 74411619 to 74411648 29 + TSS region transcription start site region 67230
Tssr73008 7 74428162 to 74428167 5 - TSS region transcription start site region 73008
Tssr73009 7 74430248 to 74430257 9 - TSS region transcription start site region 73009
Tssr73010 7 74448344 to 74448379 35 - TSS region transcription start site region 73010
Tssr73011 7 74473322 to 74473331 9 - TSS region transcription start site region 73011
Tssr73012 7 74482118 to 74482132 14 - TSS region transcription start site region 73012
Tssr73013 7 74492646 to 74492673 27 - TSS region transcription start site region 73013
Tssr73014 7 74501099 to 74501126 27 - TSS region transcription start site region 73014
Tssr73015 7 74502156 to 74502160 4 - TSS region transcription start site region 73015
Cpgi19274 7 74504145 to 74504740 595 CpG island CpG island 19274
Tssr67231 7 74529487 to 74529492 5 + TSS region transcription start site region 67231
A430057L12Rik 7 74542825 to 74544112 1287 unclassified gene RIKEN cDNA A430057L12 gene
Tssr73016 7 74542932 to 74542974 42 - TSS region transcription start site region 73016
Tssr73017 7 74543274 to 74543302 28 - TSS region transcription start site region 73017