Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:71646989-73557489

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121 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm44689 7 71681775 to 71688447 6672 - lincRNA gene predicted gene 44689
Gm7675 7 71696714 to 71697399 685 + pseudogene predicted gene 7675
Cpgi19257 7 71705318 to 71706045 727 CpG island CpG island 19257
Gm44688 7 71706076 to 71706612 536 + unclassified gene predicted gene 44688
Gm17988 7 71717837 to 71718371 534 + pseudogene predicted gene, 17988
Tssr72926 7 71719217 to 71719221 4 - TSS region transcription start site region 72926
4930441H08Rik 7 71909695 to 71939191 29496 + lincRNA gene RIKEN cDNA 4930441H08 gene
Gm36633 7 71947527 to 71962018 14491 - lincRNA gene predicted gene, 36633
1700011C11Rik 7 71961175 to 72027317 66142 + lincRNA gene RIKEN cDNA 1700011C11 gene
Mctp2 7 72077827 to 72306595 228768 - protein coding gene multiple C2 domains, transmembrane 2
Gm36696 7 72110761 to 72113456 2695 + antisense lncRNA gene predicted gene, 36696
Gm45715 7 72156094 to 72157133 1039 - sense intronic lncRNA gene predicted gene 45715
Tssr72927 7 72248957 to 72248961 4 - TSS region transcription start site region 72927
Tssr72928 7 72279705 to 72279708 3 - TSS region transcription start site region 72928
Cpgi19258 7 72306328 to 72306954 626 CpG island CpG island 19258
Tssr72929 7 72306600 to 72306647 47 - TSS region transcription start site region 72929
Tssr72930 7 72306740 to 72306755 15 - TSS region transcription start site region 72930
Gm39035 7 72306862 to 72323340 16478 + lncRNA gene predicted gene, 39035
Tssr67176 7 72306874 to 72306914 40 + TSS region transcription start site region 67176
Tssr67177 7 72326480 to 72326504 24 + TSS region transcription start site region 67177
D7Mit274 7 72341602 to 72341715 113 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 274
Tssr67178 7 72442803 to 72442804 1 + TSS region transcription start site region 67178
D7Mit317 7 72490740 to 72490841 101 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 317
Gm37620 7 72601989 to 72602489 500 + unclassified gene predicted gene, 37620
Gm28745 7 72637212 to 72637516 304 - lincRNA gene predicted gene 28745
Rpl17-ps10 7 72648757 to 72649311 554 - pseudogene ribosomal protein L17, pseudogene 10
Tssr72931 7 72649349 to 72649359 10 - TSS region transcription start site region 72931
Gm28744 7 72668017 to 72668356 339 - lincRNA gene predicted gene 28744
Tssr67179 7 72672777 to 72672792 15 + TSS region transcription start site region 67179
Kansl2-ps 7 72672818 to 72674278 1460 + pseudogene KAT8 regulatory NSL complex subunit 2, pseudogene
Gm7693 7 72712634 to 72713621 987 - pseudogene predicted gene 7693
Gm36865 7 72745571 to 72826646 81075 - lncRNA gene predicted gene, 36865
Tssr2301 7 72910528 to 72910529 1 - TSS region transcription start site region 2301
Gm5335 7 72989154 to 72990153 999 - pseudogene predicted gene 5335
Tssr2302 7 73005163 to 73005164 1 + TSS region transcription start site region 2302
Gm44725 7 73089423 to 73092616 3193 + lincRNA gene predicted gene 44725
Gm6567 7 73097752 to 73102068 4316 - lincRNA gene predicted gene 6567
Tssr72932 7 73105160 to 73105170 10 - TSS region transcription start site region 72932
Tssr72933 7 73105214 to 73105228 14 - TSS region transcription start site region 72933
Tssr67180 7 73105295 to 73105304 9 + TSS region transcription start site region 67180
Tssr67181 7 73105306 to 73105323 17 + TSS region transcription start site region 67181
Tssr67182 7 73105325 to 73105344 19 + TSS region transcription start site region 67182
Tssr67183 7 73105347 to 73105354 7 + TSS region transcription start site region 67183
Tssr67184 7 73108265 to 73108304 39 + TSS region transcription start site region 67184
Tssr67185 7 73112325 to 73112341 16 + TSS region transcription start site region 67185
4933435G04Rik 7 73124451 to 73126558 2107 + lincRNA gene RIKEN cDNA 4933435G04 gene
Tssr67186 7 73127868 to 73127878 10 + TSS region transcription start site region 67186
Gm28746 7 73185014 to 73185393 379 - lincRNA gene predicted gene 28746
Gm20083 7 73185744 to 73189446 3702 + lincRNA gene predicted gene, 20083
Tssr67187 7 73185766 to 73185775 9 + TSS region transcription start site region 67187
Tssr67188 7 73185798 to 73185809 11 + TSS region transcription start site region 67188
Gm30075 7 73202775 to 73238531 35756 - lincRNA gene predicted gene, 30075
Powg 7 73207357 to 92932955 19725598 QTL post-ovarectomy weight gain
Tssr72934 7 73238645 to 73238662 17 - TSS region transcription start site region 72934
Tssr67189 7 73255965 to 73255997 32 + TSS region transcription start site region 67189
Cpgi19259 7 73310323 to 73310826 503 CpG island CpG island 19259
4930429H19Rik 7 73310380 to 73315193 4813 + lincRNA gene RIKEN cDNA 4930429H19 gene
Tssr72935 7 73310944 to 73310956 12 - TSS region transcription start site region 72935
A730056A06Rik 7 73314003 to 73375774 61771 - antisense lncRNA gene RIKEN cDNA A730056A06 gene
Cpgi19260 7 73323243 to 73323394 151 CpG island CpG island 19260
Cpgi19261 7 73372328 to 73372700 372 CpG island CpG island 19261
Cpgi19262 7 73374918 to 73376455 1537 CpG island CpG island 19262
Tssr67190 7 73375480 to 73375492 12 + TSS region transcription start site region 67190
Tssr67191 7 73375494 to 73375549 55 + TSS region transcription start site region 67191
Rgma 7 73375520 to 73419899 44379 + protein coding gene repulsive guidance molecule family member A
Tssr67192 7 73375566 to 73375578 12 + TSS region transcription start site region 67192
Tssr67193 7 73375585 to 73375597 12 + TSS region transcription start site region 67193
Tssr72936 7 73375722 to 73375744 22 - TSS region transcription start site region 72936
Tssr67194 7 73375814 to 73375833 19 + TSS region transcription start site region 67194
Tssr67195 7 73375840 to 73375856 16 + TSS region transcription start site region 67195
Cpgi19263 7 73390690 to 73392019 1329 CpG island CpG island 19263
Tssr67196 7 73391240 to 73391296 56 + TSS region transcription start site region 67196
Cpgi19264 7 73399726 to 73400104 378 CpG island CpG island 19264
Gm44758 7 73404350 to 73406417 2067 + unclassified gene predicted gene 44758
Cpgi19265 7 73409186 to 73409566 380 CpG island CpG island 19265
Tssr67197 7 73409383 to 73409394 11 + TSS region transcription start site region 67197
Tssr67198 7 73409571 to 73409578 7 + TSS region transcription start site region 67198
Tssr67199 7 73418286 to 73418289 3 + TSS region transcription start site region 67199
Tssr67200 7 73418439 to 73418468 29 + TSS region transcription start site region 67200
Tssr67201 7 73418625 to 73418638 13 + TSS region transcription start site region 67201
Gm44645 7 73422250 to 73423902 1652 + unclassified gene predicted gene 44645
Tssr72937 7 73422539 to 73422540 1 - TSS region transcription start site region 72937
Chd2 7 73426652 to 73541746 115094 - protein coding gene chromodomain helicase DNA binding protein 2
Tssr72938 7 73455528 to 73455532 4 - TSS region transcription start site region 72938
Gm44553 7 73458597 to 73460633 2036 - unclassified gene predicted gene 44553
Tssr72939 7 73464238 to 73464242 4 - TSS region transcription start site region 72939
Tssr72940 7 73466098 to 73466108 10 - TSS region transcription start site region 72940
Tssr72941 7 73476103 to 73476107 4 - TSS region transcription start site region 72941
Gm44552 7 73498002 to 73499248 1246 - unclassified gene predicted gene 44552
Tssr72942 7 73502628 to 73502632 4 - TSS region transcription start site region 72942
Tssr72943 7 73515768 to 73515788 20 - TSS region transcription start site region 72943
Tssr72944 7 73517521 to 73517534 13 - TSS region transcription start site region 72944
Tssr72945 7 73519514 to 73519568 54 - TSS region transcription start site region 72945
C130083A15Rik 7 73527266 to 73528725 1459 - unclassified gene RIKEN cDNA C130083A15 gene
Tssr72946 7 73532272 to 73532276 4 - TSS region transcription start site region 72946
Cpgi19266 7 73537526 to 73538158 632 CpG island CpG island 19266
Tssr72947 7 73537687 to 73537766 79 - TSS region transcription start site region 72947
Tssr67202 7 73537947 to 73537970 23 + TSS region transcription start site region 67202
Tssr67203 7 73538011 to 73538058 47 + TSS region transcription start site region 67203
Gm44686 7 73538013 to 73554801 16788 + antisense lncRNA gene predicted gene 44686
Tssr67204 7 73538064 to 73538092 28 + TSS region transcription start site region 67204
Tssr72948 7 73539260 to 73539273 13 - TSS region transcription start site region 72948
Tssr67205 7 73539364 to 73539378 14 + TSS region transcription start site region 67205
1810026B05Rik 7 73539798 to 73558395 18597 - lncRNA gene RIKEN cDNA 1810026B05 gene
Tssr72949 7 73540888 to 73540919 31 - TSS region transcription start site region 72949
Tssr72950 7 73541085 to 73541121 36 - TSS region transcription start site region 72950
Tssr72951 7 73541425 to 73541432 7 - TSS region transcription start site region 72951
Tssr72952 7 73541496 to 73541505 9 - TSS region transcription start site region 72952
Tssr72953 7 73541719 to 73541737 18 - TSS region transcription start site region 72953
Tssr72954 7 73541738 to 73541758 20 - TSS region transcription start site region 72954
Tssr72955 7 73541823 to 73541829 6 - TSS region transcription start site region 72955
Tssr72956 7 73543626 to 73543656 30 - TSS region transcription start site region 72956
Tssr72957 7 73545643 to 73545647 4 - TSS region transcription start site region 72957
Tssr72958 7 73546094 to 73546098 4 - TSS region transcription start site region 72958
Tssr72959 7 73550364 to 73550397 33 - TSS region transcription start site region 72959
Tssr72960 7 73550654 to 73550668 14 - TSS region transcription start site region 72960
Tssr72961 7 73552066 to 73552086 20 - TSS region transcription start site region 72961
Tssr72962 7 73554977 to 73554992 15 - TSS region transcription start site region 72962
Tssr72963 7 73556693 to 73556702 9 - TSS region transcription start site region 72963
Tssr72964 7 73556708 to 73556732 24 - TSS region transcription start site region 72964
Tssr67206 7 73556823 to 73556838 15 + TSS region transcription start site region 67206